FFCP PHASE1:Hg19::chr13:80126792..80126802,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:80126792..80126802,+ | |||
|description=CAGE_peak_at_chr13:80126792..80126802,+ | |||
|id=chr13:80126792..80126802,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.20e-25;3!CL:0000511;2.47e-19;1!CL:0002625;2.47e-19;1!CL:0000216;2.47e-19;1!CL:0000349;3.57e-09;19!CL:0002231;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.95e-25,3;CL:0000511,1.56e-19,1;CL:0002625,1.56e-19,1;CL:0000216,1.56e-19,1;CL:0000349,4.41e-09,19;CL:0002231,2.79e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;2.37e-10;2!DOID:0060084;2.55e-07;3!DOID:127;2.55e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.57e-10,2;DOID:0060084,2.05e-07,3;DOID:127,2.05e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.20e-25;3!UBERON:0000920;6.20e-25;3!UBERON:0001136;2.47e-19;1!UBERON:0001343;2.47e-19;1!UBERON:0004910;2.47e-19;1!UBERON:0004813;2.47e-19;1!UBERON:0005631;7.48e-17;10!UBERON:0000158;7.48e-17;10!UBERON:0002771;1.43e-10;2!UBERON:0001875;2.37e-10;2!UBERON:0004909;2.37e-10;2!UBERON:0006514;2.37e-10;2!UBERON:0000478;2.22e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.95e-25,3;UBERON:0001136,1.56e-19,1;UBERON:0001343,1.56e-19,1;UBERON:0004910,1.56e-19,1;UBERON:0005154,1.56e-19,1;UBERON:0005295,1.56e-19,1;UBERON:0004813,1.56e-19,1;UBERON:0005297,1.56e-19,1;UBERON:0005294,1.56e-19,1;UBERON:0010141,1.56e-19,1;UBERON:0005891,1.56e-19,1;UBERON:0005631,4.17e-12,14;UBERON:0000158,4.17e-12,14;UBERON:0003124,3.30e-11,7;UBERON:0002771,1.43e-10,2;UBERON:0004909,1.89e-10,2;UBERON:0001875,2.99e-10,2;UBERON:0006514,2.99e-10,2;UBERON:0004871,6.06e-10,8;UBERON:0000478,2.62e-07,24 | |||
|phase1_expression=0,0.642301571672949,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0.390178042679635,0.328875809207352,0,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.434539556882471,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0.482022059766964,0.330881918197182,0.217879444092406,0.949082476444386,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.179117045405697,0,0,0.492663237895943,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.448340575974109,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0.511707249066704,0.482561763430822,0,0,0.355123450626254,0,0,0,0.120859449591622,1.20303882181971,0.460404944679482,0.114814448164607,0.546273504020151,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0.082509499920588,0,0.650060246036521,1.6068392984416,0.193341436584244,0,0,0.137836572484531,0,0,0,0.178064071293475,0.330569830721956,0,0.382838137483752,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.424216295861138,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0.633322905892992,0.329294892959902,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.593929361665277,0.307160702099232,0.994147647766298,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0.278847488557207,0,0,0,0,0.325942115766024,1.27600463892768,0.366390373607449,1.06606955203727,0,0,0,0,0,0,0,0,1.89898258075224,0.326465616318295,0,0.216388639742091,0.995261931078505,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0,0.164230914106418,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0.19980960958213,0,0,0.171594997861965,0.432164393964449,0,0.471388069233591,0,0,0,0,1.20084057741958,0.273810757783986,0,0.429765441419957,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0,0,1.24632101408756,0,0,0.121499113316049,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,1.72844298240254,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,3.41673541725497,0,0,0.332787154610557,0,0.138348634936231,0,0,0.285465333544967,0.235265819698172,0,0,0.298509605773748,0,0,0,0,0,0,0,0.15543720058278,0,0.318593534327405,0.449803112163605,0,0.414706207840855,0.53168342911599,0.521745061811734,0,0.761610424337591,0.813741466409323,0,0,0,0,0.400027764663154,0.686791410365586,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0.345430341731199,0,0.414775308455192,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,1.531227386766,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0.196295437002051,0,0.917142992608395,0.577628330751691,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0.135075169236789,0.781078098613847,0.206686796501184,0,0.546974809018219,0,0.496211178389294,0,0.127762427639595,0,0.336283722218824,0,0,0,0,0.171488009437418,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0.118332000730565,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0.154348316215889,0.218559560503957,0.470317296361523,0,0,0,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| |||
|short_description=p@chr13:80126792..80126802,+ | |||
}} |
Latest revision as of 17:19, 24 July 2015
Short description: | p@chr13:80126792..80126802, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:80126792..80126802, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.95e-25 | 3 |
androgen binding protein secreting cell | 1.56e-19 | 1 |
seminiferous tubule epithelial cell | 1.56e-19 | 1 |
Sertoli cell | 1.56e-19 | 1 |
extraembryonic cell | 4.41e-09 | 19 |
epithelial cell of prostate | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 8.95e-25 | 3 |
mesothelium | 1.56e-19 | 1 |
seminiferous tubule of testis | 1.56e-19 | 1 |
epithelium of male gonad | 1.56e-19 | 1 |
epithelial cord | 1.56e-19 | 1 |
sex cord | 1.56e-19 | 1 |
seminiferous tubule epithelium | 1.56e-19 | 1 |
testis sex cord | 1.56e-19 | 1 |
genital ridge | 1.56e-19 | 1 |
primitive sex cord of indifferent gonad | 1.56e-19 | 1 |
coelomic epithelium | 1.56e-19 | 1 |
extraembryonic membrane | 4.17e-12 | 14 |
membranous layer | 4.17e-12 | 14 |
chorion | 3.30e-11 | 7 |
middle temporal gyrus | 1.43e-10 | 2 |
epithelium of gonad | 1.89e-10 | 2 |
globus pallidus | 2.99e-10 | 2 |
pallidum | 2.99e-10 | 2 |
somatic layer of lateral plate mesoderm | 6.06e-10 | 8 |
extraembryonic structure | 2.62e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.57e-10 | 2 |
cell type benign neoplasm | 2.05e-07 | 3 |
leiomyoma | 2.05e-07 | 3 |