FFCP PHASE1:Hg19::chr13:89815427..89815468,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:89815427..89815468,-
|short_description=p@chr13:89815427..89815468,-
|description=CAGE_peak_at_chr13:89815427..89815468,-
|association_with_transcript=NA
...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:89815427..89815468,- | |||
|coexpression_cluster_id=C3389 | |||
|description=CAGE_peak_at_chr13:89815427..89815468,- | |||
|id=chr13:89815427..89815468,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.59e-12;4!DOID:4468;7.43e-12;2!DOID:1325;2.37e-07;7!DOID:3904;2.37e-07;7!DOID:0060085;4.58e-07;1!DOID:3165;4.58e-07;1!DOID:0060121;4.58e-07;1!DOID:2438;4.58e-07;1!DOID:4418;4.58e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.16e-12,4;DOID:4468,7.64e-12,2;DOID:0050687,1.92e-09,143;DOID:1325,1.98e-07,7;DOID:3904,1.98e-07,7;DOID:0060085,4.58e-07,1;DOID:3165,4.58e-07,1;DOID:0060121,4.58e-07,1;DOID:2438,4.58e-07,1;DOID:4418,4.58e-07,1;DOID:14566,7.20e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002619!8.90e-15!22;UBERON:0001950!4.29e-14!20;UBERON:0001893!4.76e-13!34;UBERON:0000956!1.17e-12!25;UBERON:0000203!1.17e-12!25;UBERON:0001869!1.73e-12!32;UBERON:0002791!9.34e-12!33;UBERON:0001049!2.30e-11!57;UBERON:0005068!2.30e-11!57;UBERON:0006241!2.30e-11!57;UBERON:0007135!2.30e-11!57;UBERON:0002616!8.46e-11!59;UBERON:0000955!2.57e-10!69;UBERON:0006238!2.57e-10!69;UBERON:0002780!3.78e-10!41;UBERON:0001890!3.78e-10!41;UBERON:0006240!3.78e-10!41;UBERON:0002020!6.45e-10!34;UBERON:0003528!6.45e-10!34;UBERON:0003080!8.17e-10!42;UBERON:0000073!1.95e-08!94;UBERON:0001016!1.95e-08!94;UBERON:0001017!8.19e-08!82;UBERON:0007023!9.98e-08!115;UBERON:0003075!1.88e-07!86;UBERON:0007284!1.88e-07!86;UBERON:0001872!2.63e-07!5;UBERON:0005743!3.33e-07!86;UBERON:0002021!6.61e-07!5;UBERON:0002346!7.01e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.16e-08;20!UBERON:0001870;6.15e-08;3!UBERON:0002619;1.30e-07;22!UBERON:0001282;4.85e-07;1!UBERON:0009842;4.85e-07;1!UBERON:0003704;4.85e-07;1!UBERON:0001171;4.85e-07;1!UBERON:0001172;4.85e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.46e-08,20;UBERON:0001870,6.49e-08,3;UBERON:0002619,1.46e-07,22;UBERON:0001282,4.85e-07,1;UBERON:0009842,4.85e-07,1;UBERON:0003704,4.85e-07,1;UBERON:0001171,4.85e-07,1;UBERON:0001172,4.85e-07,1;UBERON:0001869,8.37e-07,32 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58152958673932,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0.500474079487857,0,0,0,0,0,0,0,0,1.80054657650641,1.13357782162283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57120912791539,6.68326949356763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.3200184413092,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,26.4565937413939,3.45474491260183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,1.77328571372128,0,0,0,0,12.6475681990171,0,0.897576444097721,10.3215003325908,0,0,0,0,0,0,0,0,0,0.189753732724185,0,2.53197677433632,6.03961390188847,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,6.30392853375054,15.3010251011302,1.39283751102933,0,0.881747022766871,0,1.79828648623917,0,0,0.514784993585894,0,0,0,0,0,0,0.866851769704557,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4445212435327,0,0,0,0,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0,0,0.327872630709804,0,0.886068179966986,0,3.254964198369,0,0.110929051536852,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0.467426619694449,1.10961172300523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565909307848,0,0,0,0,0.861074898304078,0,0.920529751259204,0,0,0,0,0,8.40914214078507,0,0,0,0,0,0,0,0,0,0.513833800771676,1.41696576325585,0.159633859057151,0,2.01657356977374,0.0691572524642179,0.968853873791107,0,0,0,0,0,0.381382095467167,0,0,0,5.042626717588,0,0,1.14640342257068,0,1.55336444622308,0,2.27355476151302,0.824405532520789,1.09394961803644,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0.611727596791485,0.460409414939944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18332000730565,0.766920642832419,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,4.17796627838873,3.80544290488219,0,1.97892930141772,3.17021971490014,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,9.50238757585777,0,0,0,3.0084904715085,0.151557396436479,0,0,0,0,0.23806443146374,0.0645889098360061,0,0.112131862580613,0,0,0,0,0.202056159043763,0,0,0,0.320182037633146,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58152958673932,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0.500474079487857,0,0,0,0,0,0,0,0,1.80054657650641,1.13357782162283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57120912791539,6.68326949356763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.3200184413092,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,26.4565937413939,3.45474491260183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,1.77328571372128,0,0,0,0,12.6475681990171,0,0.897576444097721,10.3215003325908,0,0,0,0,0,0,0,0,0,0.189753732724185,0,2.53197677433632,6.03961390188847,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,6.30392853375054,15.3010251011302,1.39283751102933,0,0.881747022766871,0,1.79828648623917,0,0,0.514784993585894,0,0,0,0,0,0,0.866851769704557,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4445212435327,0,0,0,0,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0,0,0.327872630709804,0,0.886068179966986,0,3.254964198369,0,0.110929051536852,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0.467426619694449,1.10961172300523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565909307848,0,0,0,0,0.861074898304078,0,0.920529751259204,0,0,0,0,0,8.40914214078507,0,0,0,0,0,0,0,0,0,0.513833800771676,1.41696576325585,0.159633859057151,0,2.01657356977374,0.0691572524642179,0.968853873791107,0,0,0,0,0,0.381382095467167,0,0,0,5.042626717588,0,0,1.14640342257068,0,1.55336444622308,0,2.27355476151302,0.824405532520789,1.09394961803644,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0.611727596791485,0.460409414939944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18332000730565,0.766920642832419,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,4.17796627838873,3.80544290488219,0,1.97892930141772,3.17021971490014,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,9.50238757585777,0,0,0,3.0084904715085,0.151557396436479,0,0,0,0,0.23806443146374,0.0645889098360061,0,0.112131862580613,0,0,0,0,0.202056159043763,0,0,0,0.320182037633146,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr13:89815427..89815468,- | |||
}} | }} |
Latest revision as of 17:25, 24 July 2015
Short description: | p@chr13:89815427..89815468, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:89815427..89815468, - |
Coexpression cluster: | C3389_acute_adrenal_fibrous_cholangiocellular_liposarcoma_choriocarcinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 2.46e-08 | 20 |
frontal cortex | 6.49e-08 | 3 |
regional part of cerebral cortex | 1.46e-07 | 22 |
intralobular bile duct | 4.85e-07 | 1 |
acinus | 4.85e-07 | 1 |
intrahepatic bile duct | 4.85e-07 | 1 |
portal lobule | 4.85e-07 | 1 |
hepatic acinus | 4.85e-07 | 1 |
cerebral hemisphere | 8.37e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.16e-12 | 4 |
clear cell adenocarcinoma | 7.64e-12 | 2 |
cell type cancer | 1.92e-09 | 143 |
bronchus cancer | 1.98e-07 | 7 |
bronchogenic carcinoma | 1.98e-07 | 7 |
organ system benign neoplasm | 4.58e-07 | 1 |
skin benign neoplasm | 4.58e-07 | 1 |
integumentary system benign neoplasm | 4.58e-07 | 1 |
dermis tumor | 4.58e-07 | 1 |
cutaneous fibrous histiocytoma | 4.58e-07 | 1 |
disease of cellular proliferation | 7.20e-07 | 239 |