FFCP PHASE1:Hg19::chr13:99644885..99644901,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:99644885..99644901,+
|short_description=p@chr13:99644885..99644901,+
|description=CAGE_peak_at_chr13:99644885..99644901,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:99644885..99644901,+ | |||
|coexpression_cluster_id=C617 | |||
|description=CAGE_peak_at_chr13:99644885..99644901,+ | |||
|id=chr13:99644885..99644901,+ | |||
|ontology_enrichment_celltype=CL:0002159!9.22e-15!13;CL:0002166!5.98e-13!3;CL:0002621!6.48e-13!3;CL:0000066!3.40e-11!254;CL:0000240!6.20e-11!6;CL:0000311!6.20e-11!6;CL:0000079!6.20e-11!6;CL:0000237!6.20e-11!6;CL:0000036!6.20e-11!6;CL:0000357!6.20e-11!6;CL:0000114!6.20e-11!6;CL:0000362!1.45e-08!8;CL:0000312!5.07e-08!5;CL:0005020!9.40e-07!6;CL:0002138!9.40e-07!6;CL:0005022!9.40e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.66e-16;14!CL:0000946;9.28e-16;1!CL:0000786;9.28e-16;1!CL:0000362;1.10e-14;9!CL:0000312;3.16e-12;5!CL:0000240;2.40e-10;6!CL:0000311;2.40e-10;6!CL:0000079;2.40e-10;6!CL:0000237;2.40e-10;6!CL:0002138;2.40e-10;6!CL:0000317;2.31e-08;2!CL:1000448;2.31e-08;2!CL:0002308;2.31e-08;2!CL:0002140;2.31e-08;2!CL:0002077;5.03e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.25e-16,14;CL:0000946,9.99e-16,1;CL:0000786,9.99e-16,1;CL:0000980,9.99e-16,1;CL:0000362,7.89e-15,9;CL:0000312,2.67e-12,5;CL:0000240,2.09e-10,6;CL:0000311,2.09e-10,6;CL:0000079,2.09e-10,6;CL:0000237,2.09e-10,6;CL:0000036,2.09e-10,6;CL:0000357,2.09e-10,6;CL:0000114,2.09e-10,6;CL:0005020,3.34e-10,6;CL:0002138,3.34e-10,6;CL:0005022,3.34e-10,6;CL:0000785,1.61e-08,2;CL:0000955,1.61e-08,2;CL:0000818,1.61e-08,2;CL:0000954,1.61e-08,2;CL:0000816,1.61e-08,2;CL:0000317,1.73e-08,2;CL:1000448,1.73e-08,2;CL:0002308,1.73e-08,2;CL:0002140,1.73e-08,2;CL:0002077,5.37e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;2.40e-10;6!CL:0000114;2.40e-10;6!CL:0005022;2.40e-10;6!CL:0000954;1.55e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;5.56e-16;1!DOID:3603;5.56e-16;1!DOID:2355;9.28e-16;1!DOID:74;1.55e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,5.56e-16,1;DOID:3603,5.56e-16,1;DOID:2355,8.63e-16,1;DOID:74,1.50e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001949!6.48e-13!3;UBERON:0001708!8.01e-10!4;UBERON:0001704!8.01e-10!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;4.74e-09;15!UBERON:0007376;4.74e-09;15!UBERON:0002419;2.31e-08;2!UBERON:0007771;2.31e-08;2!UBERON:0003297;2.31e-08;2!UBERON:0001821;2.31e-08;2!UBERON:0003487;2.31e-08;2!UBERON:0001820;2.31e-08;2!UBERON:0001473;5.56e-08;8!UBERON:0004536;5.56e-08;8!UBERON:0006558;5.56e-08;8!UBERON:0010371;8.74e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,3.90e-09,15;UBERON:0007376,3.90e-09,15;UBERON:0007383,3.90e-09,15;UBERON:0002419,1.73e-08,2;UBERON:0007771,1.73e-08,2;UBERON:0003297,1.73e-08,2;UBERON:0001821,1.73e-08,2;UBERON:0003487,1.73e-08,2;UBERON:0001820,1.73e-08,2;UBERON:0005089,1.73e-08,2;UBERON:0005088,1.73e-08,2;UBERON:0001473,7.10e-08,8;UBERON:0004536,7.10e-08,8;UBERON:0006558,7.10e-08,8 | |||
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| ||
|short_description=p@chr13:99644885..99644901,+ | |||
}} | }} |
Latest revision as of 17:42, 24 July 2015
Short description: | p@chr13:99644885..99644901, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:99644885..99644901, + |
Coexpression cluster: | C617_mucinous_gall_signet_bile_maxillary_keratoacanthoma_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.25e-16 | 14 |
antibody secreting cell | 9.99e-16 | 1 |
plasma cell | 9.99e-16 | 1 |
plasmablast | 9.99e-16 | 1 |
epidermal cell | 7.89e-15 | 9 |
keratinocyte | 2.67e-12 | 5 |
stratified squamous epithelial cell | 2.09e-10 | 6 |
keratin accumulating cell | 2.09e-10 | 6 |
stratified epithelial cell | 2.09e-10 | 6 |
keratinizing barrier epithelial cell | 2.09e-10 | 6 |
epithelial fate stem cell | 2.09e-10 | 6 |
stratified epithelial stem cell | 2.09e-10 | 6 |
surface ectodermal cell | 2.09e-10 | 6 |
lymphangioblast | 3.34e-10 | 6 |
endothelial cell of lymphatic vessel | 3.34e-10 | 6 |
vascular lymphangioblast | 3.34e-10 | 6 |
mature B cell | 1.61e-08 | 2 |
pre-B-II cell | 1.61e-08 | 2 |
transitional stage B cell | 1.61e-08 | 2 |
small pre-B-II cell | 1.61e-08 | 2 |
immature B cell | 1.61e-08 | 2 |
sebum secreting cell | 1.73e-08 | 2 |
epithelial cell of sweat gland | 1.73e-08 | 2 |
epithelial cell of skin gland | 1.73e-08 | 2 |
acinar cell of sebaceous gland | 1.73e-08 | 2 |
ecto-epithelial cell | 5.37e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 3.90e-09 | 15 |
outer epithelium | 3.90e-09 | 15 |
enveloping layer of ectoderm | 3.90e-09 | 15 |
skin gland | 1.73e-08 | 2 |
epidermis gland | 1.73e-08 | 2 |
gland of integumental system | 1.73e-08 | 2 |
sebaceous gland | 1.73e-08 | 2 |
skin sebaceous gland | 1.73e-08 | 2 |
sweat gland | 1.73e-08 | 2 |
sweat gland placode | 1.73e-08 | 2 |
sebaceous gland placode | 1.73e-08 | 2 |
lymphatic vessel | 7.10e-08 | 8 |
lymph vasculature | 7.10e-08 | 8 |
lymphatic part of lymphoid system | 7.10e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 5.56e-16 | 1 |
mucinous cystadenocarcinoma | 5.56e-16 | 1 |
anemia | 8.63e-16 | 1 |
hematopoietic system disease | 1.50e-08 | 2 |