FFCP PHASE1:Hg19::chr14:104028710..104028740,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:104028710..104028740,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr14:104028710..104028740,+ | |description=CAGE_peak_at_chr14:104028710..104028740,+ | ||
|id=chr14:104028710..104028740,+ | |id=chr14:104028710..104028740,+ | ||
|ontology_enrichment_celltype=CL:0000222!5.47e-07!119 | |ontology_enrichment_celltype=CL:0000222!5.47e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000511;1.12e-17;1!CL:0002625;1.12e-17;1!CL:0000216;1.12e-17;1!CL:0002262;1.17e-09;2!CL:1000398;1.17e-09;2!CL:0002593;1.64e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,8.72e-18,1;CL:0002625,8.72e-18,1;CL:0000216,8.72e-18,1;CL:0002262,1.12e-09,2;CL:1000398,1.12e-09,2;CL:0002593,1.71e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.02e-07;10!UBERON:0005564;1.02e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;9.37e-07;3!DOID:127;9.37e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.15e-07,3;DOID:127,8.15e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000055!3.31e-12!69;UBERON:0001981!3.31e-11!60;UBERON:0007500!3.31e-11!60;UBERON:0004537!3.31e-11!60;UBERON:0006965!3.31e-11!60;UBERON:0002049!4.54e-11!79;UBERON:0007798!4.54e-11!79;UBERON:0001637!7.55e-11!42;UBERON:0003509!7.55e-11!42;UBERON:0004572!7.55e-11!42;UBERON:0004872!9.26e-11!84;UBERON:0004535!7.95e-09!110;UBERON:0004573!1.09e-08!33;UBERON:0004571!1.09e-08!33;UBERON:0001009!2.63e-08!113;UBERON:0003914!4.29e-08!118;UBERON:0004111!6.73e-08!241;UBERON:0000947!1.40e-07!21;UBERON:0010191!1.40e-07!21;UBERON:0000477!4.25e-07!286 | |ontology_enrichment_uberon=UBERON:0000055!3.31e-12!69;UBERON:0001981!3.31e-11!60;UBERON:0007500!3.31e-11!60;UBERON:0004537!3.31e-11!60;UBERON:0006965!3.31e-11!60;UBERON:0002049!4.54e-11!79;UBERON:0007798!4.54e-11!79;UBERON:0001637!7.55e-11!42;UBERON:0003509!7.55e-11!42;UBERON:0004572!7.55e-11!42;UBERON:0004872!9.26e-11!84;UBERON:0004535!7.95e-09!110;UBERON:0004573!1.09e-08!33;UBERON:0004571!1.09e-08!33;UBERON:0001009!2.63e-08!113;UBERON:0003914!4.29e-08!118;UBERON:0004111!6.73e-08!241;UBERON:0000947!1.40e-07!21;UBERON:0010191!1.40e-07!21;UBERON:0000477!4.25e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.94e-19;8!UBERON:0001136;1.12e-17;1!UBERON:0001343;1.12e-17;1!UBERON:0004910;1.12e-17;1!UBERON:0004813;1.12e-17;1!UBERON:0003135;2.52e-14;11!UBERON:0003513;2.13e-10;7!UBERON:0001281;1.17e-09;2!UBERON:0003497;1.17e-09;2!UBERON:0003909;1.17e-09;2!UBERON:0003835;1.17e-09;2!UBERON:0004909;1.64e-09;2!UBERON:0002456;1.64e-09;2!UBERON:0000991;8.77e-08;21!UBERON:0003101;1.87e-07;22!UBERON:0000079;1.87e-07;22!UBERON:0001280;7.49e-07;3!UBERON:0004647;7.49e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.76e-19,8;UBERON:0001136,8.72e-18,1;UBERON:0001343,8.72e-18,1;UBERON:0004910,8.72e-18,1;UBERON:0005154,8.72e-18,1;UBERON:0005295,8.72e-18,1;UBERON:0004813,8.72e-18,1;UBERON:0005297,8.72e-18,1;UBERON:0005294,8.72e-18,1;UBERON:0010141,8.72e-18,1;UBERON:0005891,8.72e-18,1;UBERON:0003135,2.35e-14,11;UBERON:0003513,2.14e-10,7;UBERON:0001281,1.12e-09,2;UBERON:0003497,1.12e-09,2;UBERON:0003909,1.12e-09,2;UBERON:0003835,1.12e-09,2;UBERON:0004909,1.44e-09,2;UBERON:0002456,1.71e-09,2;UBERON:0000058,1.70e-08,19;UBERON:0000991,8.47e-08,21;UBERON:0009196,8.47e-08,21;UBERON:0009117,8.47e-08,21;UBERON:0005564,8.47e-08,21;UBERON:0004176,1.81e-07,22;UBERON:0003101,1.81e-07,22;UBERON:0000079,1.81e-07,22;UBERON:0004876,5.64e-07,11;UBERON:0004872,6.67e-07,83;UBERON:0001280,7.28e-07,3;UBERON:0004647,7.28e-07,3;UBERON:0005171,7.28e-07,3 | |||
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| ||
|short_description=p@chr14:104028710..104028740,+ | |short_description=p@chr14:104028710..104028740,+ | ||
}} | }} |
Latest revision as of 18:21, 24 July 2015
Short description: | p@chr14:104028710..104028740, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:104028710..104028740, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 8.72e-18 | 1 |
seminiferous tubule epithelial cell | 8.72e-18 | 1 |
Sertoli cell | 8.72e-18 | 1 |
endothelial cell of sinusoid | 1.12e-09 | 2 |
endothelial cell of hepatic sinusoid | 1.12e-09 | 2 |
smooth muscle cell of the internal thoracic artery | 1.71e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 1.76e-19 | 8 |
mesothelium | 8.72e-18 | 1 |
seminiferous tubule of testis | 8.72e-18 | 1 |
epithelium of male gonad | 8.72e-18 | 1 |
epithelial cord | 8.72e-18 | 1 |
sex cord | 8.72e-18 | 1 |
seminiferous tubule epithelium | 8.72e-18 | 1 |
testis sex cord | 8.72e-18 | 1 |
genital ridge | 8.72e-18 | 1 |
primitive sex cord of indifferent gonad | 8.72e-18 | 1 |
coelomic epithelium | 8.72e-18 | 1 |
male reproductive organ | 2.35e-14 | 11 |
trunk blood vessel | 2.14e-10 | 7 |
hepatic sinusoid | 1.12e-09 | 2 |
abdomen blood vessel | 1.12e-09 | 2 |
sinusoid | 1.12e-09 | 2 |
abdominal segment blood vessel | 1.12e-09 | 2 |
epithelium of gonad | 1.44e-09 | 2 |
internal thoracic artery | 1.71e-09 | 2 |
duct | 1.70e-08 | 19 |
gonad | 8.47e-08 | 21 |
indifferent external genitalia | 8.47e-08 | 21 |
indifferent gonad | 8.47e-08 | 21 |
gonad primordium | 8.47e-08 | 21 |
external genitalia | 1.81e-07 | 22 |
male organism | 1.81e-07 | 22 |
male reproductive system | 1.81e-07 | 22 |
urogenital ridge | 5.64e-07 | 11 |
splanchnic layer of lateral plate mesoderm | 6.67e-07 | 83 |
liver parenchyma | 7.28e-07 | 3 |
liver lobule | 7.28e-07 | 3 |
hepatic duct | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.15e-07 | 3 |
leiomyoma | 8.15e-07 | 3 |