FFCP PHASE1:Hg19::chr14:106071504..106071518,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=175bp_to_ENST00000390540_5end | |association_with_transcript=175bp_to_ENST00000390540_5end | ||
|cluster_id=chr14:106071504..106071518,- | |||
|coexpression_cluster_id=C54 | |coexpression_cluster_id=C54 | ||
|description=CAGE_peak_1_at_ENST00000390540_5end | |description=CAGE_peak_1_at_ENST00000390540_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.52e-39!24;CL:0000826!1.52e-39!24;CL:0000236!7.97e-34!14;CL:0000838!7.66e-17!52;CL:0000542!1.78e-16!53;CL:0000051!1.78e-16!53;CL:0002087!6.67e-11!119;CL:0000840!4.30e-10!5;CL:0001029!4.30e-10!5;CL:0002031!5.04e-09!124;CL:0000738!9.32e-09!140;CL:0000946!2.09e-07!1;CL:0000786!2.09e-07!1;CL:0000980!2.09e-07!1;CL:0000990!7.31e-07!8 | |ontology_enrichment_celltype=CL:0000945!1.52e-39!24;CL:0000826!1.52e-39!24;CL:0000236!7.97e-34!14;CL:0000838!7.66e-17!52;CL:0000542!1.78e-16!53;CL:0000051!1.78e-16!53;CL:0002087!6.67e-11!119;CL:0000840!4.30e-10!5;CL:0001029!4.30e-10!5;CL:0002031!5.04e-09!124;CL:0000738!9.32e-09!140;CL:0000946!2.09e-07!1;CL:0000786!2.09e-07!1;CL:0000980!2.09e-07!1;CL:0000990!7.31e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.25e-41;13!CL:0000945;9.50e-40;24!CL:0000840;4.91e-24;5!CL:0000946;1.93e-16;1!CL:0000786;1.93e-16;1!CL:0000990;2.93e-16;8!CL:0000451;2.02e-13;10!CL:0000542;9.95e-12;53 | |ontology_enrichment_celltype_v019=CL:0000236;1.25e-41;13!CL:0000945;9.50e-40;24!CL:0000840;4.91e-24;5!CL:0000946;1.93e-16;1!CL:0000786;1.93e-16;1!CL:0000990;2.93e-16;8!CL:0000451;2.02e-13;10!CL:0000542;9.95e-12;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.97e-52,14;CL:0000945,8.16e-40,24;CL:0000826,8.16e-40,24;CL:0000840,4.91e-24,5;CL:0001029,4.91e-24,5;CL:0000838,4.10e-18,52;CL:0000542,9.22e-18,53;CL:0000051,9.22e-18,53;CL:0000990,2.93e-16,8;CL:0000946,3.07e-16,1;CL:0000786,3.07e-16,1;CL:0000980,3.07e-16,1;CL:0002087,5.44e-15,115;CL:0002031,2.49e-14,120;CL:0000451,2.02e-13,10;CL:0000738,1.55e-12,136;CL:0002032,1.96e-10,161;CL:0000837,1.96e-10,161;CL:0000037,5.90e-10,168;CL:0000988,2.14e-09,177;CL:0000785,8.74e-09,2;CL:0000955,8.74e-09,2;CL:0000818,8.74e-09,2;CL:0000954,8.74e-09,2;CL:0000816,8.74e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000051;9.95e-12;53!CL:0000954;6.93e-09;2 | |ontology_enrichment_development_v019=CL:0000051;9.95e-12;53!CL:0000954;6.93e-09;2 | ||
|ontology_enrichment_disease=DOID:630!1.20e-07!1;DOID:0050177!1.20e-07!1;DOID:0050427!1.20e-07!1 | |ontology_enrichment_disease=DOID:630!1.20e-07!1;DOID:0050177!1.20e-07!1;DOID:0050427!1.20e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:630;7.57e-17;1!DOID:0050177;7.57e-17;1!DOID:0050427;7.57e-17;1 | |ontology_enrichment_disease_v019=DOID:630;7.57e-17;1!DOID:0050177;7.57e-17;1!DOID:0050427;7.57e-17;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,7.57e-17,1;DOID:0050177,7.57e-17,1;DOID:0050427,7.57e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.07e-08!7;UBERON:0001154!3.85e-07!1;UBERON:0001153!3.85e-07!1;UBERON:0002370!5.05e-07!4;UBERON:0005058!5.05e-07!4;UBERON:0009113!5.05e-07!4;UBERON:0003295!5.05e-07!4;UBERON:0005562!5.05e-07!4;UBERON:0002372!7.40e-07!1;UBERON:0001961!7.40e-07!1;UBERON:0001744!7.40e-07!1;UBERON:0001735!7.40e-07!1 | |ontology_enrichment_uberon=UBERON:0004177!3.07e-08!7;UBERON:0001154!3.85e-07!1;UBERON:0001153!3.85e-07!1;UBERON:0002370!5.05e-07!4;UBERON:0005058!5.05e-07!4;UBERON:0009113!5.05e-07!4;UBERON:0003295!5.05e-07!4;UBERON:0005562!5.05e-07!4;UBERON:0002372!7.40e-07!1;UBERON:0001961!7.40e-07!1;UBERON:0001744!7.40e-07!1;UBERON:0001735!7.40e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.71e-31;2!UBERON:0005058;4.71e-31;2!UBERON:0009113;4.71e-31;2!UBERON:0004177;4.66e-13;5!UBERON:0005057;4.66e-13;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;4.71e-31;2!UBERON:0005058;4.71e-31;2!UBERON:0009113;4.71e-31;2!UBERON:0004177;4.66e-13;5!UBERON:0005057;4.66e-13;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.68e-16,4;UBERON:0005058,5.68e-16,4;UBERON:0009113,5.68e-16,4;UBERON:0003295,5.68e-16,4;UBERON:0005562,5.68e-16,4;UBERON:0003351,5.64e-11,6;UBERON:0004177,1.54e-09,7;UBERON:0005057,1.54e-09,7;UBERON:0000974,6.12e-07,10;UBERON:0003408,6.12e-07,10;UBERON:0001042,6.12e-07,10;UBERON:0009145,6.12e-07,10 | |||
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|short_description=p1@ENST00000390540 | |short_description=p1@ENST00000390540 | ||
}} | }} |
Latest revision as of 18:37, 24 July 2015
Short description: | p1@ENST00000390540 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000390540_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 175bp_to_ENST00000390540_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.97e-52 | 14 |
lymphocyte of B lineage | 8.16e-40 | 24 |
pro-B cell | 8.16e-40 | 24 |
immature conventional dendritic cell | 4.91e-24 | 5 |
common dendritic progenitor | 4.91e-24 | 5 |
lymphoid lineage restricted progenitor cell | 4.10e-18 | 52 |
lymphocyte | 9.22e-18 | 53 |
common lymphoid progenitor | 9.22e-18 | 53 |
conventional dendritic cell | 2.93e-16 | 8 |
antibody secreting cell | 3.07e-16 | 1 |
plasma cell | 3.07e-16 | 1 |
plasmablast | 3.07e-16 | 1 |
nongranular leukocyte | 5.44e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.49e-14 | 120 |
dendritic cell | 2.02e-13 | 10 |
leukocyte | 1.55e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.96e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-10 | 161 |
hematopoietic stem cell | 5.90e-10 | 168 |
hematopoietic cell | 2.14e-09 | 177 |
mature B cell | 8.74e-09 | 2 |
pre-B-II cell | 8.74e-09 | 2 |
transitional stage B cell | 8.74e-09 | 2 |
small pre-B-II cell | 8.74e-09 | 2 |
immature B cell | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.68e-16 | 4 |
hemolymphoid system gland | 5.68e-16 | 4 |
thymic region | 5.68e-16 | 4 |
pharyngeal gland | 5.68e-16 | 4 |
thymus primordium | 5.68e-16 | 4 |
pharyngeal epithelium | 5.64e-11 | 6 |
hemopoietic organ | 1.54e-09 | 7 |
immune organ | 1.54e-09 | 7 |
neck | 6.12e-07 | 10 |
gland of gut | 6.12e-07 | 10 |
chordate pharynx | 6.12e-07 | 10 |
pharyngeal region of foregut | 6.12e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.57e-17 | 1 |
monogenic disease | 7.57e-17 | 1 |
xeroderma pigmentosum | 7.57e-17 | 1 |