FFCP PHASE1:Hg19::chr14:106321710..106321722,-: Difference between revisions
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|id=chr14:106321710..106321722,-
|short_description=p3@FJ197674
|description=CAGE_peak_3_at_FJ197674_5end
|association_with_transcript=15bp_to_FJ197674_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_FJ197674_5end | |||
|cluster_id=chr14:106321710..106321722,- | |||
|coexpression_cluster_id=C350 | |||
|description=CAGE_peak_3_at_FJ197674_5end | |||
|id=chr14:106321710..106321722,- | |||
|ontology_enrichment_celltype=CL:0000945!3.22e-51!24;CL:0000826!3.22e-51!24;CL:0000236!2.37e-31!14;CL:0000542!1.10e-21!53;CL:0000051!1.10e-21!53;CL:0000838!4.83e-20!52;CL:0002087!4.48e-14!119;CL:0000037!6.95e-12!172;CL:0000566!6.95e-12!172;CL:0000738!1.28e-11!140;CL:0000988!1.05e-10!182;CL:0002032!1.89e-09!165;CL:0000837!1.89e-09!165;CL:0002031!2.70e-09!124;CL:0000842!5.09e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;9.38e-103;24!CL:0000236;2.54e-62;13!CL:0000542;5.55e-31;53!CL:0002087;2.40e-07;104!CL:0000817;5.78e-07;1!CL:0000946;8.67e-07;1!CL:0000786;8.67e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.65e-103,24;CL:0000826,7.65e-103,24;CL:0000236,1.22e-67,14;CL:0000542,8.35e-49,53;CL:0000051,8.35e-49,53;CL:0000838,4.45e-45,52;CL:0002087,9.33e-22,115;CL:0002031,1.30e-18,120;CL:0000738,1.13e-17,136;CL:0002032,1.07e-15,161;CL:0000837,1.07e-15,161;CL:0000037,7.74e-15,168;CL:0000988,7.83e-14,177;CL:0000817,2.19e-08,3;CL:0000946,6.88e-07,1;CL:0000786,6.88e-07,1;CL:0000980,6.88e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;5.55e-31;53!UBERON:0004872;5.98e-08;7!UBERON:0001045;5.78e-07;1!UBERON:0006298;5.78e-07;1!UBERON:0010115;8.67e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;1.92e-07;1!DOID:4960;8.67e-07;1!DOID:0070004;8.67e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.86e-07,1;DOID:4960,9.18e-07,1;DOID:0070004,9.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.20e-14!115;UBERON:0004177!1.31e-08!7;UBERON:0002106!1.41e-08!3;UBERON:0004854!1.41e-08!3;UBERON:0009034!1.41e-08!3;UBERON:0002095!1.41e-08!3;UBERON:0004782!1.41e-08!3;UBERON:0003281!1.41e-08!3;UBERON:0009664!1.41e-08!3;UBERON:0002296!1.41e-08!3;UBERON:0005602!1.41e-08!3;UBERON:0001179!1.41e-08!3;UBERON:0006293!1.41e-08!3;UBERON:0000178!5.12e-07!15;UBERON:0000179!5.12e-07!15;UBERON:0000463!5.12e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.41e-08;3!UBERON:0000029;1.55e-07;1!UBERON:0001154;5.78e-07;1!UBERON:0001736;5.78e-07;1!UBERON:0001153;5.78e-07;1!UBERON:0009854;5.78e-07;1!UBERON:0002363;8.67e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.29e-08,3;UBERON:0004854,1.29e-08,3;UBERON:0009034,1.29e-08,3;UBERON:0002095,1.29e-08,3;UBERON:0004782,1.29e-08,3;UBERON:0003281,1.29e-08,3;UBERON:0009664,1.29e-08,3;UBERON:0002296,1.29e-08,3;UBERON:0005602,1.29e-08,3;UBERON:0001179,1.29e-08,3;UBERON:0006293,1.29e-08,3;UBERON:0000029,1.55e-07,1;UBERON:0001736,5.78e-07,1;UBERON:0006298,5.78e-07,1;UBERON:0001154,6.12e-07,1;UBERON:0001153,6.12e-07,1;UBERON:0001045,6.12e-07,1;UBERON:0002363,8.67e-07,1;UBERON:0007645,8.67e-07,1;UBERON:0007647,8.67e-07,1;UBERON:0010115,8.67e-07,1 | |||
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| ||
|short_description=p3@FJ197674 | |||
}} | }} |
Latest revision as of 18:40, 24 July 2015
Short description: | p3@FJ197674 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FJ197674_5end |
Coexpression cluster: | C350_b_lymph_acute_CD19_lymphoma_spleen_B |
Association with transcript: | 15bp_to_FJ197674_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.65e-103 | 24 |
pro-B cell | 7.65e-103 | 24 |
B cell | 1.22e-67 | 14 |
lymphocyte | 8.35e-49 | 53 |
common lymphoid progenitor | 8.35e-49 | 53 |
lymphoid lineage restricted progenitor cell | 4.45e-45 | 52 |
nongranular leukocyte | 9.33e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.30e-18 | 120 |
leukocyte | 1.13e-17 | 136 |
hematopoietic oligopotent progenitor cell | 1.07e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-15 | 161 |
hematopoietic stem cell | 7.74e-15 | 168 |
hematopoietic cell | 7.83e-14 | 177 |
precursor B cell | 2.19e-08 | 3 |
antibody secreting cell | 6.88e-07 | 1 |
plasma cell | 6.88e-07 | 1 |
plasmablast | 6.88e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.29e-08 | 3 |
gastrointestinal system mesentery | 1.29e-08 | 3 |
stomach region | 1.29e-08 | 3 |
mesentery | 1.29e-08 | 3 |
gastrointestinal system serosa | 1.29e-08 | 3 |
mesentery of stomach | 1.29e-08 | 3 |
gut mesentery | 1.29e-08 | 3 |
dorsal mesentery | 1.29e-08 | 3 |
dorsal mesogastrium | 1.29e-08 | 3 |
peritoneal cavity | 1.29e-08 | 3 |
spleen primordium | 1.29e-08 | 3 |
lymph node | 1.55e-07 | 1 |
submandibular gland | 5.78e-07 | 1 |
submandibular gland primordium | 5.78e-07 | 1 |
vermiform appendix | 6.12e-07 | 1 |
caecum | 6.12e-07 | 1 |
midgut | 6.12e-07 | 1 |
dura mater | 8.67e-07 | 1 |
future meninx | 8.67e-07 | 1 |
ectomeninx | 8.67e-07 | 1 |
future dura mater | 8.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.86e-07 | 1 |
bone marrow cancer | 9.18e-07 | 1 |
myeloma | 9.18e-07 | 1 |