FFCP PHASE1:Hg19::chr14:106322056..106322063,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=251bp_to_AJ294734_5end | |association_with_transcript=251bp_to_AJ294734_5end | ||
|cluster_id=chr14:106322056..106322063,- | |||
|coexpression_cluster_id=C350 | |coexpression_cluster_id=C350 | ||
|description=CAGE_peak_4_at_AJ294734_5end | |description=CAGE_peak_4_at_AJ294734_5end | ||
|id=chr14:106322056..106322063,- | |id=chr14:106322056..106322063,- | ||
|ontology_enrichment_celltype=CL:0000945;2.44e-97;24!CL:0000236;3.87e-63;13!CL:0000542;5.78e-32;53!CL:0002087;4.84e-07;104 | |ontology_enrichment_celltype=CL:0000945!1.08e-64!24;CL:0000826!1.08e-64!24;CL:0000236!1.39e-39!14;CL:0000542!1.23e-28!53;CL:0000051!1.23e-28!53;CL:0000838!1.52e-26!52;CL:0002087!1.12e-13!119;CL:0000037!9.55e-12!172;CL:0000566!9.55e-12!172;CL:0000738!1.15e-11!140;CL:0000988!1.12e-10!182;CL:0000842!4.16e-10!3;CL:0002032!7.32e-09!165;CL:0000837!7.32e-09!165;CL:0002031!1.20e-08!124;CL:0000224!1.10e-07!4 | ||
| | |ontology_enrichment_celltype_v019=CL:0000945;2.44e-97;24!CL:0000236;3.87e-63;13!CL:0000542;5.78e-32;53!CL:0002087;4.84e-07;104 | ||
|ontology_enrichment_disease=DOID:12603;9.70e-10;1!DOID:0060058;6.21e-08;10 | |ontology_enrichment_celltype_v019_2=CL:0000945,1.51e-97,24;CL:0000826,1.51e-97,24;CL:0000236,1.62e-58,14;CL:0000542,4.99e-48,53;CL:0000051,4.99e-48,53;CL:0000838,1.53e-43,52;CL:0002087,2.65e-20,115;CL:0002031,4.70e-17,120;CL:0000738,1.03e-16,136;CL:0002032,1.19e-13,161;CL:0000837,1.19e-13,161;CL:0000037,5.91e-13,168;CL:0000988,3.86e-12,177 | ||
|ontology_enrichment_uberon=UBERON:0002106;4.59e-12;3!UBERON:0000029;4.27e-10;1!UBERON:0001831;1.91e-09;1!UBERON:0001567;1.91e-09;1!UBERON:0004177;1.38e-07;5!UBERON:0005057;1.38e-07;5 | |ontology_enrichment_development_v019=CL:0000051;5.78e-32;53!UBERON:0008801;1.91e-09;1 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;9.70e-10;1!DOID:0060058;6.21e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.06e-09,1;DOID:0060058,5.64e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.08e-13!115;UBERON:0000178!1.24e-09!15;UBERON:0000179!1.24e-09!15;UBERON:0000463!1.24e-09!15;UBERON:0004177!1.73e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.59e-12;3!UBERON:0000029;4.27e-10;1!UBERON:0001831;1.91e-09;1!UBERON:0001567;1.91e-09;1!UBERON:0004177;1.38e-07;5!UBERON:0005057;1.38e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,5.28e-12,3;UBERON:0004854,5.28e-12,3;UBERON:0009034,5.28e-12,3;UBERON:0002095,5.28e-12,3;UBERON:0004782,5.28e-12,3;UBERON:0003281,5.28e-12,3;UBERON:0009664,5.28e-12,3;UBERON:0002296,5.28e-12,3;UBERON:0005602,5.28e-12,3;UBERON:0001179,5.28e-12,3;UBERON:0006293,5.28e-12,3;UBERON:0000029,4.09e-10,1;UBERON:0001831,2.67e-09,1;UBERON:0001567,2.67e-09,1;UBERON:0008801,2.67e-09,1 | |||
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| ||
|short_description=p4@AJ294734 | |short_description=p4@AJ294734 | ||
}} | }} |
Latest revision as of 18:40, 24 July 2015
Short description: | p4@AJ294734 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AJ294734_5end |
Coexpression cluster: | C350_b_lymph_acute_CD19_lymphoma_spleen_B |
Association with transcript: | 251bp_to_AJ294734_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.51e-97 | 24 |
pro-B cell | 1.51e-97 | 24 |
B cell | 1.62e-58 | 14 |
lymphocyte | 4.99e-48 | 53 |
common lymphoid progenitor | 4.99e-48 | 53 |
lymphoid lineage restricted progenitor cell | 1.53e-43 | 52 |
nongranular leukocyte | 2.65e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 4.70e-17 | 120 |
leukocyte | 1.03e-16 | 136 |
hematopoietic oligopotent progenitor cell | 1.19e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.19e-13 | 161 |
hematopoietic stem cell | 5.91e-13 | 168 |
hematopoietic cell | 3.86e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 5.28e-12 | 3 |
gastrointestinal system mesentery | 5.28e-12 | 3 |
stomach region | 5.28e-12 | 3 |
mesentery | 5.28e-12 | 3 |
gastrointestinal system serosa | 5.28e-12 | 3 |
mesentery of stomach | 5.28e-12 | 3 |
gut mesentery | 5.28e-12 | 3 |
dorsal mesentery | 5.28e-12 | 3 |
dorsal mesogastrium | 5.28e-12 | 3 |
peritoneal cavity | 5.28e-12 | 3 |
spleen primordium | 5.28e-12 | 3 |
lymph node | 4.09e-10 | 1 |
parotid gland | 2.67e-09 | 1 |
cheek | 2.67e-09 | 1 |
parotid gland primordium | 2.67e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.06e-09 | 1 |
lymphoma | 5.64e-08 | 10 |