FFCP PHASE1:Hg19::chr14:106829729..106829758,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AF460702,AF460703,AF460708,AF460709,AF460728,AF460785,AF460821,AF460837,AY003807,AY003817_5end | |association_with_transcript=0bp_to_AF460702,AF460703,AF460708,AF460709,AF460728,AF460785,AF460821,AF460837,AY003807,AY003817_5end | ||
|cluster_id=chr14:106829729..106829758,- | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_1_at_AF460702_5end,CAGE_peak_1_at_AF460703_5end,CAGE_peak_1_at_AF460708_5end,CAGE_peak_1_at_AF460709_5end,CAGE_peak_1_at_AF460728_5end,CAGE_peak_1_at_AF460785_5end,CAGE_peak_1_at_AF460821_5end,CAGE_peak_1_at_AF460837_5end,CAGE_peak_1_at_AY003807_5end,CAGE_peak_1_at_AY003817_5end | |description=CAGE_peak_1_at_AF460702_5end,CAGE_peak_1_at_AF460703_5end,CAGE_peak_1_at_AF460708_5end,CAGE_peak_1_at_AF460709_5end,CAGE_peak_1_at_AF460728_5end,CAGE_peak_1_at_AF460785_5end,CAGE_peak_1_at_AF460821_5end,CAGE_peak_1_at_AF460837_5end,CAGE_peak_1_at_AY003807_5end,CAGE_peak_1_at_AY003817_5end | ||
|id=chr14:106829729..106829758,- | |id=chr14:106829729..106829758,- | ||
|ontology_enrichment_celltype=CL:0000236!1.16e-21!14;CL:0000945!7.65e-17!24;CL:0000826!7.65e-17!24;CL:0000946!4.09e-10!1;CL:0000786!4.09e-10!1;CL:0000980!4.09e-10!1;CL:0000838!1.85e-09!52;CL:0000542!2.93e-09!53;CL:0000051!2.93e-09!53 | |ontology_enrichment_celltype=CL:0000236!1.16e-21!14;CL:0000945!7.65e-17!24;CL:0000826!7.65e-17!24;CL:0000946!4.09e-10!1;CL:0000786!4.09e-10!1;CL:0000980!4.09e-10!1;CL:0000838!1.85e-09!52;CL:0000542!2.93e-09!53;CL:0000051!2.93e-09!53 | ||
|ontology_enrichment_celltype_v019=CL:0000946;9.91e-41;1!CL:0000786;9.91e-41;1!CL:0000945;5.55e-27;24!CL:0000236;3.64e-13;13!CL:0000542;2.33e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,9.91e-41,1;CL:0000786,9.91e-41,1;CL:0000980,9.91e-41,1;CL:0000945,5.19e-27,24;CL:0000826,5.19e-27,24;CL:0000236,3.76e-26,14;CL:0000785,3.81e-21,2;CL:0000955,3.81e-21,2;CL:0000818,3.81e-21,2;CL:0000954,3.81e-21,2;CL:0000816,3.81e-21,2;CL:0000817,1.40e-14,3;CL:0000838,6.81e-13,52;CL:0000542,1.16e-12,53;CL:0000051,1.16e-12,53 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.21e-40;1!CL:0000954;3.81e-21;2!CL:0000051;2.33e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001154!5.31e-10!1;UBERON:0001153!5.31e-10!1;UBERON:0000029!7.50e-10!1;UBERON:0002363!2.67e-09!1;UBERON:0007647!2.67e-09!1;UBERON:0010115!2.67e-09!1;UBERON:0007023!2.74e-08!115 | |ontology_enrichment_uberon=UBERON:0001154!5.31e-10!1;UBERON:0001153!5.31e-10!1;UBERON:0000029!7.50e-10!1;UBERON:0002363!2.67e-09!1;UBERON:0007647!2.67e-09!1;UBERON:0010115!2.67e-09!1;UBERON:0007023!2.74e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;2.21e-40;1!UBERON:0001153;2.21e-40;1!UBERON:0009854;2.21e-40;1!UBERON:0009856;3.42e-11;4!UBERON:0004907;3.22e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,3.30e-40,1;UBERON:0001153,3.30e-40,1;UBERON:0001045,3.30e-40,1;UBERON:0004907,3.49e-09,5 | |||
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|short_description=p1@AF460702,p1@AF460703,p1@AF460708,p1@AF460709,p1@AF460728,p1@AF460785,p1@AF460821,p1@AF460837,p1@AY003807,p1@AY003817 | |short_description=p1@AF460702,p1@AF460703,p1@AF460708,p1@AF460709,p1@AF460728,p1@AF460785,p1@AF460821,p1@AF460837,p1@AY003807,p1@AY003817 | ||
}} | }} |
Latest revision as of 18:45, 24 July 2015
Short description: | p1@AF460702, p1@AF460703, p1@AF460708, p1@AF460709, p1@AF460728, p1@AF460785, p1@AF460821, p1@AF460837, p1@AY003807, p1@AY003817 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AF460702_5end, CAGE_peak_1_at_AF460703_5end, CAGE_peak_1_at_AF460708_5end, CAGE_peak_1_at_AF460709_5end, CAGE_peak_1_at_AF460728_5end, CAGE_peak_1_at_AF460785_5end, CAGE_peak_1_at_AF460821_5end, CAGE_peak_1_at_AF460837_5end, CAGE_peak_1_at_AY003807_5end, CAGE_peak_1_at_AY003817_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | 0bp_to_AF460702, AF460703, AF460708, AF460709, AF460728, AF460785, AF460821, AF460837, AY003807, AY003817_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 9.91e-41 | 1 |
plasma cell | 9.91e-41 | 1 |
plasmablast | 9.91e-41 | 1 |
lymphocyte of B lineage | 5.19e-27 | 24 |
pro-B cell | 5.19e-27 | 24 |
B cell | 3.76e-26 | 14 |
mature B cell | 3.81e-21 | 2 |
pre-B-II cell | 3.81e-21 | 2 |
transitional stage B cell | 3.81e-21 | 2 |
small pre-B-II cell | 3.81e-21 | 2 |
immature B cell | 3.81e-21 | 2 |
precursor B cell | 1.40e-14 | 3 |
lymphoid lineage restricted progenitor cell | 6.81e-13 | 52 |
lymphocyte | 1.16e-12 | 53 |
common lymphoid progenitor | 1.16e-12 | 53 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 3.30e-40 | 1 |
caecum | 3.30e-40 | 1 |
midgut | 3.30e-40 | 1 |
lower digestive tract | 3.49e-09 | 5 |