FFCP PHASE1:Hg19::chr14:38679584..38679601,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:38679584..38679601,+ | |||
|coexpression_cluster_id=C3232 | |||
|description=CAGE_peak_at_chr14:38679584..38679601,+ | |description=CAGE_peak_at_chr14:38679584..38679601,+ | ||
|id=chr14:38679584..38679601,+ | |id=chr14:38679584..38679601,+ | ||
|ontology_enrichment_celltype=CL:0002620!8.38e-27!23;CL:0000057!7.45e-12!75;CL:0000055!2.27e-11!180;CL:0002594!2.66e-11!4;CL:0000359!1.50e-09!32;CL:0000192!8.19e-08!42;CL:0000514!8.19e-08!42;CL:0000680!5.87e-07!57;CL:0000056!5.87e-07!57;CL:0000355!5.87e-07!57 | |ontology_enrichment_celltype=CL:0002620!8.38e-27!23;CL:0000057!7.45e-12!75;CL:0000055!2.27e-11!180;CL:0002594!2.66e-11!4;CL:0000359!1.50e-09!32;CL:0000192!8.19e-08!42;CL:0000514!8.19e-08!42;CL:0000680!5.87e-07!57;CL:0000056!5.87e-07!57;CL:0000355!5.87e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.65e-28;23!CL:0002553;1.31e-14;1!CL:0002593;7.78e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.26e-28,23;CL:0002553,1.41e-14,1;CL:0000057,2.52e-13,76;CL:0002593,8.04e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.75e-14!5;DOID:450!5.75e-14!5;DOID:66!5.75e-14!5;DOID:423!5.75e-14!5;DOID:0080000!5.75e-14!5;DOID:11722!5.75e-14!5;DOID:0060084!1.60e-09!3;DOID:127!1.60e-09!3;DOID:0060072!3.27e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.53e-18;3!DOID:127;2.53e-18;3!DOID:0060072;5.37e-14;4!DOID:17;8.31e-12;5!DOID:450;8.31e-12;5!DOID:66;8.31e-12;5!DOID:423;8.31e-12;5!DOID:0080000;8.31e-12;5!DOID:11722;8.31e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.77e-18,3;DOID:127,1.77e-18,3;DOID:0060072,4.12e-14,4;DOID:17,8.78e-12,5;DOID:450,8.78e-12,5;DOID:66,8.78e-12,5;DOID:423,8.78e-12,5;DOID:0080000,8.78e-12,5;DOID:11722,8.78e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.42e-13!40;UBERON:0002199!1.31e-11!45;UBERON:0002416!1.31e-11!45;UBERON:0001310!2.66e-11!4;UBERON:0001981!2.90e-11!60;UBERON:0007500!2.90e-11!60;UBERON:0004537!2.90e-11!60;UBERON:0006965!2.90e-11!60;UBERON:0000055!2.11e-10!69;UBERON:0001637!1.48e-09!42;UBERON:0003509!1.48e-09!42;UBERON:0004572!1.48e-09!42;UBERON:0002049!1.84e-08!79;UBERON:0007798!1.84e-08!79;UBERON:0004290!9.70e-07!70;UBERON:0004872!9.73e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.17e-11;41!UBERON:0002199;6.15e-11;46!UBERON:0002416;6.15e-11;46!UBERON:0003102;4.57e-08;50!UBERON:0002456;7.78e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.81e-15,41;UBERON:0002199,9.87e-14,46;UBERON:0002416,9.87e-14,46;UBERON:0002456,8.04e-08,2 | |||
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| ||
|short_description=p@chr14:38679584..38679601,+ | |short_description=p@chr14:38679584..38679601,+ | ||
}} | }} |
Latest revision as of 20:36, 24 July 2015
Short description: | p@chr14:38679584..38679601, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:38679584..38679601, + |
Coexpression cluster: | C3232_Fibroblast_Smooth_leiomyoma_mesenchymal_nonsmall_Myoblast_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.26e-28 | 23 |
lung fibroblast | 1.41e-14 | 1 |
fibroblast | 2.52e-13 | 76 |
smooth muscle cell of the internal thoracic artery | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.81e-15 | 41 |
integument | 9.87e-14 | 46 |
integumental system | 9.87e-14 | 46 |
internal thoracic artery | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.77e-18 | 3 |
leiomyoma | 1.77e-18 | 3 |
benign neoplasm | 4.12e-14 | 4 |
musculoskeletal system disease | 8.78e-12 | 5 |
myotonic disease | 8.78e-12 | 5 |
muscle tissue disease | 8.78e-12 | 5 |
myopathy | 8.78e-12 | 5 |
muscular disease | 8.78e-12 | 5 |
myotonic dystrophy | 8.78e-12 | 5 |