FFCP PHASE1:Hg19::chr14:52066745..52066774,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-75bp_to_ENST00000556617_5end | |association_with_transcript=-75bp_to_ENST00000556617_5end | ||
|cluster_id=chr14:52066745..52066774,- | |||
|coexpression_cluster_id=C233 | |||
|description=CAGE_peak_2_at_ENST00000556617_5end | |description=CAGE_peak_2_at_ENST00000556617_5end | ||
|id=chr14:52066745..52066774,- | |id=chr14:52066745..52066774,- | ||
|ontology_enrichment_celltype=CL:0002622!1.83e-11!3 | |ontology_enrichment_celltype=CL:0002622!1.83e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0002622;5.91e-20;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,7.16e-20,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.07e-15;1!UBERON:0005795;1.50e-13;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.40e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,2.00e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0003101!4.07e-11!22;UBERON:0000079!4.07e-11!22;UBERON:0001046!7.61e-11!19;UBERON:0006947!1.04e-10!3;UBERON:0004054!1.04e-10!3;UBERON:0003937!3.66e-10!12;UBERON:0005399!3.66e-10!12;UBERON:0003688!3.30e-09!6;UBERON:0002358!3.30e-09!6;UBERON:0003684!3.30e-09!6;UBERON:0001178!3.30e-09!6;UBERON:0000162!1.21e-08!14;UBERON:0001353!1.21e-08!14;UBERON:0000163!1.21e-08!14;UBERON:0006866!1.21e-08!14;UBERON:0000164!1.21e-08!14;UBERON:0000931!1.21e-08!14;UBERON:0007023!1.75e-08!115;UBERON:0005904!3.92e-08!4;UBERON:0004122!5.12e-08!15;UBERON:0002367!5.48e-08!11;UBERON:0010147!5.48e-08!11;UBERON:0009846!5.48e-08!11;UBERON:0003353!5.48e-08!11;UBERON:0004902!5.48e-08!11;UBERON:0003820!5.48e-08!11;UBERON:0009847!5.48e-08!11;UBERON:0000059!9.29e-08!11;UBERON:0005156!3.75e-07!59;UBERON:0000990!3.75e-07!59;UBERON:0004457!8.51e-07!12;UBERON:0000042!8.51e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;5.98e-16;1!UBERON:0005795;8.02e-16;1!UBERON:0001154;1.07e-15;1!UBERON:0001153;1.07e-15;1!UBERON:0009854;1.07e-15;1!UBERON:0002367;2.63e-12;11!UBERON:0010147;2.63e-12;11!UBERON:0003937;2.49e-11;12!UBERON:0005399;2.49e-11;12!UBERON:0000995;3.17e-08;17!UBERON:0003975;8.51e-08;18!UBERON:0000160;1.15e-07;17!UBERON:0001155;3.04e-07;9!UBERON:0004175;9.40e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,5.56e-16,1;UBERON:0001154,9.99e-16,1;UBERON:0001153,9.99e-16,1;UBERON:0001045,9.99e-16,1;UBERON:0001046,2.60e-12,19;UBERON:0002367,2.90e-12,11;UBERON:0010147,2.90e-12,11;UBERON:0009846,2.90e-12,11;UBERON:0003353,2.90e-12,11;UBERON:0004902,2.90e-12,11;UBERON:0003820,2.90e-12,11;UBERON:0009847,2.90e-12,11;UBERON:0003937,2.72e-11,12;UBERON:0005399,2.72e-11,12;UBERON:0005795,7.98e-11,22;UBERON:0000162,9.24e-10,14;UBERON:0001353,9.24e-10,14;UBERON:0000163,9.24e-10,14;UBERON:0006866,9.24e-10,14;UBERON:0000164,9.24e-10,14;UBERON:0000931,9.24e-10,14;UBERON:0004122,3.80e-09,15;UBERON:0005156,1.74e-08,59;UBERON:0000990,1.74e-08,59;UBERON:0000160,1.16e-07,17;UBERON:0001155,3.24e-07,9;UBERON:0000995,8.77e-07,21 | |||
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| ||
|short_description=p2@ENST00000556617 | |short_description=p2@ENST00000556617 | ||
}} | }} |
Latest revision as of 21:00, 24 July 2015
Short description: | p2@ENST00000556617 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000556617_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | -75bp_to_ENST00000556617_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 7.16e-20 | 3 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 5.56e-16 | 1 |
vermiform appendix | 9.99e-16 | 1 |
caecum | 9.99e-16 | 1 |
midgut | 9.99e-16 | 1 |
hindgut | 2.60e-12 | 19 |
prostate gland | 2.90e-12 | 11 |
male accessory sex gland | 2.90e-12 | 11 |
embryonic cloacal epithelium | 2.90e-12 | 11 |
epithelium of hindgut | 2.90e-12 | 11 |
urogenital sinus epithelium | 2.90e-12 | 11 |
prostate bud | 2.90e-12 | 11 |
prostate field | 2.90e-12 | 11 |
sex gland | 2.72e-11 | 12 |
male reproductive gland | 2.72e-11 | 12 |
embryonic uterus | 7.98e-11 | 22 |
cloaca | 9.24e-10 | 14 |
anal region | 9.24e-10 | 14 |
embryonic cloaca | 9.24e-10 | 14 |
terminal part of digestive tract | 9.24e-10 | 14 |
primitive urogenital sinus | 9.24e-10 | 14 |
proctodeum | 9.24e-10 | 14 |
genitourinary system | 3.80e-09 | 15 |
reproductive structure | 1.74e-08 | 59 |
reproductive system | 1.74e-08 | 59 |
intestine | 1.16e-07 | 17 |
colon | 3.24e-07 | 9 |
uterus | 8.77e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
teratoma | 2.00e-08 | 2 |