FFCP PHASE1:Hg19::chr14:57274753..57274759,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:57274753..57274759,- | |||
|coexpression_cluster_id=C89 | |||
|description=CAGE_peak_at_chr14:57274753..57274759,- | |||
|id=chr14:57274753..57274759,- | |||
|ontology_enrichment_celltype=CL:0002322!5.01e-14!5;CL:0002586!2.51e-11!3;CL:0002605!5.16e-11!3;CL:0000147!6.57e-09!14;CL:0000149!1.03e-08!4;CL:0000243!1.60e-07!15;CL:0000125!1.60e-07!15;CL:0000030!1.60e-07!15;CL:0000339!1.60e-07!15;CL:0002319!5.30e-07!25;CL:0000133!6.42e-07!59;CL:0000095!9.66e-07!17;CL:0000123!9.66e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000306;2.11e-08;4!CL:0002222;2.11e-08;4!CL:0002224;2.11e-08;4!CL:0000243;1.21e-07;15!CL:0000125;1.21e-07;15!CL:0000095;6.19e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.11e-08,4;CL:0002222,2.11e-08,4;CL:0002224,2.11e-08,4;CL:0000243,1.17e-07,15;CL:0000125,1.17e-07,15;CL:0000030,1.17e-07,15;CL:0000339,1.17e-07,15;CL:0000095,6.01e-07,17;CL:0000123,6.01e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.68e-11;10!UBERON:0003056;7.42e-11;3!CL:0000339;1.21e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;1.94e-10;11!DOID:5409;1.70e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.85e-10,11;DOID:5409,1.70e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000966!3.49e-25!5;UBERON:0005388!3.49e-25!5;UBERON:0001802!3.49e-25!5;UBERON:0000970!2.72e-18!20;UBERON:0002104!2.19e-17!21;UBERON:0001905!4.54e-17!2;UBERON:0002757!4.54e-17!2;UBERON:0010134!4.54e-17!2;UBERON:0002784!4.54e-17!2;UBERON:0005408!4.54e-17!2;UBERON:0001899!4.54e-17!2;UBERON:0000020!8.30e-16!23;UBERON:0001032!4.07e-15!24;UBERON:0004456!4.07e-15!24;UBERON:0000019!3.00e-14!19;UBERON:0000047!3.00e-14!19;UBERON:0004088!3.00e-14!19;UBERON:0003072!3.00e-14!19;UBERON:0003071!3.00e-14!19;UBERON:0004128!3.00e-14!19;UBERON:0003056!3.12e-13!61;UBERON:0001456!7.57e-13!21;UBERON:0007625!1.84e-11!11;UBERON:0001781!2.51e-11!3;UBERON:0001782!2.51e-11!3;UBERON:0005424!2.51e-11!3;UBERON:0003075!1.08e-10!86;UBERON:0007284!1.08e-10!86;UBERON:0005743!1.46e-10!86;UBERON:0002346!3.93e-10!90;UBERON:0000073!2.19e-09!94;UBERON:0001016!2.19e-09!94;UBERON:0005085!3.63e-09!29;UBERON:0003296!5.54e-09!4;UBERON:0010133!5.54e-09!4;UBERON:0000033!3.83e-08!123;UBERON:0000153!1.15e-07!129;UBERON:0007811!1.15e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.36e-57;2!UBERON:0002757;6.36e-57;2!UBERON:0010134;6.36e-57;2!UBERON:0005408;6.36e-57;2!UBERON:0001899;6.36e-57;2!UBERON:0003296;4.21e-29;4!UBERON:0010133;4.21e-29;4!UBERON:0002784;4.21e-29;4!UBERON:0001894;4.02e-17;7!UBERON:0000970;1.84e-13;20!UBERON:0002104;7.43e-13;21!UBERON:0000020;8.40e-12;23!UBERON:0001032;2.43e-11;24!UBERON:0004456;2.43e-11;24!UBERON:0010077;2.11e-08;4!UBERON:0005389;2.11e-08;4!UBERON:0000484;2.11e-08;4!UBERON:0000965;2.11e-08;4!UBERON:0001803;2.11e-08;4!UBERON:0000966;5.08e-07;5!UBERON:0005388;5.08e-07;5!UBERON:0001802;5.08e-07;5!UBERON:0000019;5.84e-07;19!UBERON:0000047;5.84e-07;19!UBERON:0004088;5.84e-07;19!UBERON:0010230;5.84e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.36e-57,2;UBERON:0002757,6.36e-57,2;UBERON:0010134,6.36e-57,2;UBERON:0005408,6.36e-57,2;UBERON:0001899,6.36e-57,2;UBERON:0003296,4.21e-29,4;UBERON:0010133,4.21e-29,4;UBERON:0002784,4.21e-29,4;UBERON:0001894,4.02e-17,7;UBERON:0006222,4.02e-17,7;UBERON:0000970,7.73e-13,21;UBERON:0002104,7.73e-13,21;UBERON:0000020,2.52e-11,24;UBERON:0001032,2.52e-11,24;UBERON:0004456,2.52e-11,24;UBERON:0010077,2.11e-08,4;UBERON:0005389,2.11e-08,4;UBERON:0000484,2.11e-08,4;UBERON:0002546,2.11e-08,4;UBERON:0000965,2.11e-08,4;UBERON:0001803,2.11e-08,4;UBERON:0003073,2.11e-08,4;UBERON:0005426,2.11e-08,4;UBERON:0003056,8.45e-08,61;UBERON:0000955,6.03e-07,68;UBERON:0006238,6.03e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66639931442677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.984043937099117,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,1.798532254171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,1.60710550763486,5.04425583328236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,6.16253085757634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1145275405795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630832124175395,0.655593431782173,0.886889507080059,0,0,0.551369397209069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:57274753..57274759,- | |||
}} |
Latest revision as of 21:22, 24 July 2015
Short description: | p@chr14:57274753..57274759, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:57274753..57274759, - |
Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.11e-08 | 4 |
vertebrate lens cell | 2.11e-08 | 4 |
lens epithelial cell | 2.11e-08 | 4 |
glial cell (sensu Vertebrata) | 1.17e-07 | 15 |
glial cell | 1.17e-07 | 15 |
glioblast | 1.17e-07 | 15 |
glioblast (sensu Vertebrata) | 1.17e-07 | 15 |
neuron associated cell | 6.01e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.01e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
pineal body | 6.36e-57 | 2 |
regional part of epithalamus | 6.36e-57 | 2 |
secretory circumventricular organ | 6.36e-57 | 2 |
circumventricular organ | 6.36e-57 | 2 |
epithalamus | 6.36e-57 | 2 |
gland of diencephalon | 4.21e-29 | 4 |
neuroendocrine gland | 4.21e-29 | 4 |
regional part of diencephalon | 4.21e-29 | 4 |
diencephalon | 4.02e-17 | 7 |
future diencephalon | 4.02e-17 | 7 |
eye | 7.73e-13 | 21 |
visual system | 7.73e-13 | 21 |
sense organ | 2.52e-11 | 24 |
sensory system | 2.52e-11 | 24 |
entire sense organ system | 2.52e-11 | 24 |
cuboidal epithelium | 2.11e-08 | 4 |
transparent eye structure | 2.11e-08 | 4 |
simple cuboidal epithelium | 2.11e-08 | 4 |
cranial placode | 2.11e-08 | 4 |
lens of camera-type eye | 2.11e-08 | 4 |
epithelium of lens | 2.11e-08 | 4 |
lens placode | 2.11e-08 | 4 |
lens vesicle | 2.11e-08 | 4 |
pre-chordal neural plate | 8.45e-08 | 61 |
brain | 6.03e-07 | 68 |
future brain | 6.03e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.85e-10 | 11 |
lung small cell carcinoma | 1.70e-08 | 4 |