FFCP PHASE1:Hg19::chr14:65406492..65406508,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:65406492..65406508,- | |||
|coexpression_cluster_id=C3446 | |coexpression_cluster_id=C3446 | ||
|description=CAGE_peak_at_chr14:65406492..65406508,- | |description=CAGE_peak_at_chr14:65406492..65406508,- | ||
|id=chr14:65406492..65406508,- | |id=chr14:65406492..65406508,- | ||
|ontology_enrichment_celltype=CL:0000223!2.06e-26!59;CL:0002076!2.53e-18!43;CL:0000066!3.06e-17!254;CL:0002368!8.82e-13!13;CL:0000181!3.33e-10!12;CL:0000417!3.33e-10!12;CL:0000668!3.33e-10!12;CL:0000414!3.33e-10!12;CL:0000412!3.33e-10!12;CL:0000182!3.33e-10!12;CL:0002202!5.43e-09!9;CL:0002632!5.43e-09!9;CL:0002328!4.44e-08!3;CL:0002231!9.95e-08!3;CL:0002251!1.70e-07!21;CL:0000068!1.77e-07!3;CL:0000069!1.77e-07!3;CL:0000307!1.77e-07!3;CL:0000377!1.77e-07!3 | |ontology_enrichment_celltype=CL:0000223!2.06e-26!59;CL:0002076!2.53e-18!43;CL:0000066!3.06e-17!254;CL:0002368!8.82e-13!13;CL:0000181!3.33e-10!12;CL:0000417!3.33e-10!12;CL:0000668!3.33e-10!12;CL:0000414!3.33e-10!12;CL:0000412!3.33e-10!12;CL:0000182!3.33e-10!12;CL:0002202!5.43e-09!9;CL:0002632!5.43e-09!9;CL:0002328!4.44e-08!3;CL:0002231!9.95e-08!3;CL:0002251!1.70e-07!21;CL:0000068!1.77e-07!3;CL:0000069!1.77e-07!3;CL:0000307!1.77e-07!3;CL:0000377!1.77e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.57e-22;12!CL:0002178;6.59e-08;3!CL:0002553;8.97e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.70e-22,12;CL:0000223,3.25e-15,58;CL:0002178,5.84e-08,3;CL:0000066,7.77e-08,253;CL:0002553,8.97e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.51e-25;13!UBERON:0004161;4.14e-23;11!UBERON:0001041;7.08e-13;30!UBERON:0006595;6.17e-09;86!UBERON:0003104;1.71e-07;31!CL:0000223;5.36e-07;58!UBERON:0006242;5.90e-07;1 | |||
|ontology_enrichment_disease=DOID:305!2.28e-12!106;DOID:1749!1.38e-09!14;DOID:0050687!1.40e-08!143 | |ontology_enrichment_disease=DOID:305!2.28e-12!106;DOID:1749!1.38e-09!14;DOID:0050687!1.40e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.03e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.31e-14,106;DOID:3493,7.64e-12,2;DOID:0050687,3.20e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.28e-34!169;UBERON:0000925!2.28e-34!169;UBERON:0006595!2.28e-34!169;UBERON:0001007!7.21e-30!155;UBERON:0001555!7.21e-30!155;UBERON:0007026!7.21e-30!155;UBERON:0004921!1.06e-28!129;UBERON:0004185!1.06e-28!129;UBERON:0000077!2.55e-20!130;UBERON:0001041!5.00e-18!98;UBERON:0005911!5.56e-17!82;UBERON:0000466!3.46e-16!126;UBERON:0001004!1.09e-14!72;UBERON:0009497!1.81e-12!25;UBERON:0000015!1.81e-12!25;UBERON:0002423!1.81e-12!25;UBERON:0006235!1.81e-12!25;UBERON:0004161!1.81e-12!25;UBERON:0005177!3.50e-12!107;UBERON:0005178!1.02e-11!34;UBERON:0002224!1.02e-11!34;UBERON:0009854!1.11e-11!23;UBERON:0005181!2.81e-11!35;UBERON:0008835!3.96e-10!22;UBERON:0003894!3.96e-10!22;UBERON:0009856!5.08e-10!26;UBERON:0002107!9.57e-10!19;UBERON:0006925!9.57e-10!19;UBERON:0008836!9.57e-10!19;UBERON:0000065!1.80e-09!53;UBERON:0007196!2.00e-09!14;UBERON:0001558!2.00e-09!14;UBERON:0002365!2.98e-09!31;UBERON:0002330!2.98e-09!31;UBERON:0000464!3.56e-09!104;UBERON:0003929!3.71e-09!54;UBERON:0007499!1.24e-08!25;UBERON:0008947!1.34e-08!38;UBERON:0003258!1.34e-08!38;UBERON:0000161!1.62e-08!35;UBERON:0009569!2.09e-08!113;UBERON:0004815!4.44e-08!3;UBERON:0002031!4.44e-08!3;UBERON:0003104!4.58e-08!238;UBERON:0009142!4.58e-08!238;UBERON:0003126!6.46e-08!7;UBERON:0001005!6.46e-08!7;UBERON:0000481!1.88e-07!347;UBERON:0005409!5.20e-07!35;UBERON:0002048!5.36e-07!22;UBERON:0000117!5.36e-07!22;UBERON:0000171!5.36e-07!22;UBERON:0000170!5.36e-07!22;UBERON:0005597!5.36e-07!22;UBERON:0000118!5.36e-07!22 | |ontology_enrichment_uberon=UBERON:0004119!2.28e-34!169;UBERON:0000925!2.28e-34!169;UBERON:0006595!2.28e-34!169;UBERON:0001007!7.21e-30!155;UBERON:0001555!7.21e-30!155;UBERON:0007026!7.21e-30!155;UBERON:0004921!1.06e-28!129;UBERON:0004185!1.06e-28!129;UBERON:0000077!2.55e-20!130;UBERON:0001041!5.00e-18!98;UBERON:0005911!5.56e-17!82;UBERON:0000466!3.46e-16!126;UBERON:0001004!1.09e-14!72;UBERON:0009497!1.81e-12!25;UBERON:0000015!1.81e-12!25;UBERON:0002423!1.81e-12!25;UBERON:0006235!1.81e-12!25;UBERON:0004161!1.81e-12!25;UBERON:0005177!3.50e-12!107;UBERON:0005178!1.02e-11!34;UBERON:0002224!1.02e-11!34;UBERON:0009854!1.11e-11!23;UBERON:0005181!2.81e-11!35;UBERON:0008835!3.96e-10!22;UBERON:0003894!3.96e-10!22;UBERON:0009856!5.08e-10!26;UBERON:0002107!9.57e-10!19;UBERON:0006925!9.57e-10!19;UBERON:0008836!9.57e-10!19;UBERON:0000065!1.80e-09!53;UBERON:0007196!2.00e-09!14;UBERON:0001558!2.00e-09!14;UBERON:0002365!2.98e-09!31;UBERON:0002330!2.98e-09!31;UBERON:0000464!3.56e-09!104;UBERON:0003929!3.71e-09!54;UBERON:0007499!1.24e-08!25;UBERON:0008947!1.34e-08!38;UBERON:0003258!1.34e-08!38;UBERON:0000161!1.62e-08!35;UBERON:0009569!2.09e-08!113;UBERON:0004815!4.44e-08!3;UBERON:0002031!4.44e-08!3;UBERON:0003104!4.58e-08!238;UBERON:0009142!4.58e-08!238;UBERON:0003126!6.46e-08!7;UBERON:0001005!6.46e-08!7;UBERON:0000481!1.88e-07!347;UBERON:0005409!5.20e-07!35;UBERON:0002048!5.36e-07!22;UBERON:0000117!5.36e-07!22;UBERON:0000171!5.36e-07!22;UBERON:0000170!5.36e-07!22;UBERON:0005597!5.36e-07!22;UBERON:0000118!5.36e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;2.53e-24;25!UBERON:0002107;9.26e-22;19!UBERON:0006925;9.26e-22;19!UBERON:0002365;5.48e-15;31!UBERON:0002330;5.48e-15;31!UBERON:0002368;6.86e-11;33!UBERON:0000949;3.89e-09;43!UBERON:0000974;2.47e-08;6!UBERON:0001007;2.67e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.52e-26,23;UBERON:0009497,2.34e-24,25;UBERON:0000015,2.34e-24,25;UBERON:0002423,2.34e-24,25;UBERON:0006235,2.34e-24,25;UBERON:0004161,2.34e-24,25;UBERON:0009856,3.13e-23,26;UBERON:0008835,5.20e-23,22;UBERON:0003894,5.20e-23,22;UBERON:0002107,8.40e-22,19;UBERON:0006925,8.40e-22,19;UBERON:0008836,8.40e-22,19;UBERON:0001007,5.96e-21,145;UBERON:0001555,5.96e-21,145;UBERON:0007026,5.96e-21,145;UBERON:0004921,1.17e-20,118;UBERON:0007499,5.03e-20,25;UBERON:0004119,1.84e-18,160;UBERON:0000925,1.84e-18,160;UBERON:0006595,1.84e-18,160;UBERON:0001041,6.10e-18,87;UBERON:0002365,1.13e-15,31;UBERON:0002330,1.13e-15,31;UBERON:0003929,3.49e-12,54;UBERON:0005911,1.10e-11,82;UBERON:0005177,1.51e-11,101;UBERON:0002368,4.03e-11,35;UBERON:0000949,3.06e-10,45;UBERON:0002530,4.96e-09,59;UBERON:0011216,2.30e-08,223;UBERON:0005172,2.67e-08,54;UBERON:0005173,2.67e-08,54;UBERON:0009569,1.34e-07,112;UBERON:0002417,2.72e-07,60;UBERON:0000916,2.72e-07,60 | |||
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| ||
|short_description=p@chr14:65406492..65406508,- | |short_description=p@chr14:65406492..65406508,- | ||
}} | }} |
Latest revision as of 21:56, 24 July 2015
Short description: | p@chr14:65406492..65406508, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:65406492..65406508, - |
Coexpression cluster: | C3446_Hepatocyte_bronchial_gall_signet_Prostate_smallcell_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.70e-22 | 12 |
endodermal cell | 3.25e-15 | 58 |
epithelial cell of stomach | 5.84e-08 | 3 |
epithelial cell | 7.77e-08 | 253 |
lung fibroblast | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 1.52e-26 | 23 |
epithelium of foregut-midgut junction | 2.34e-24 | 25 |
anatomical boundary | 2.34e-24 | 25 |
hepatobiliary system | 2.34e-24 | 25 |
foregut-midgut junction | 2.34e-24 | 25 |
septum transversum | 2.34e-24 | 25 |
sac | 3.13e-23 | 26 |
hepatic diverticulum | 5.20e-23 | 22 |
liver primordium | 5.20e-23 | 22 |
liver | 8.40e-22 | 19 |
digestive gland | 8.40e-22 | 19 |
liver bud | 8.40e-22 | 19 |
digestive system | 5.96e-21 | 145 |
digestive tract | 5.96e-21 | 145 |
primitive gut | 5.96e-21 | 145 |
subdivision of digestive tract | 1.17e-20 | 118 |
epithelial sac | 5.03e-20 | 25 |
endoderm-derived structure | 1.84e-18 | 160 |
endoderm | 1.84e-18 | 160 |
presumptive endoderm | 1.84e-18 | 160 |
foregut | 6.10e-18 | 87 |
exocrine gland | 1.13e-15 | 31 |
exocrine system | 1.13e-15 | 31 |
gut epithelium | 3.49e-12 | 54 |
endo-epithelium | 1.10e-11 | 82 |
trunk region element | 1.51e-11 | 101 |
endocrine gland | 4.03e-11 | 35 |
endocrine system | 3.06e-10 | 45 |
gland | 4.96e-09 | 59 |
organ system subdivision | 2.30e-08 | 223 |
abdomen element | 2.67e-08 | 54 |
abdominal segment element | 2.67e-08 | 54 |
subdivision of trunk | 1.34e-07 | 112 |
abdominal segment of trunk | 2.72e-07 | 60 |
abdomen | 2.72e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.31e-14 | 106 |
signet ring cell adenocarcinoma | 7.64e-12 | 2 |
cell type cancer | 3.20e-09 | 143 |