FFCP PHASE1:Hg19::chr14:65768965..65768980,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:65768965..65768980,+ | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_at_chr14:65768965..65768980,+ | |description=CAGE_peak_at_chr14:65768965..65768980,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!7.37e-33!24;CL:0000826!7.37e-33!24;CL:0000542!2.30e-25!53;CL:0000051!2.30e-25!53;CL:0000838!1.90e-23!52;CL:0000236!3.96e-11!14;CL:0002087!4.93e-10!119;CL:0000738!1.94e-09!140;CL:0002031!1.96e-08!124;CL:0000988!4.07e-08!182;CL:0000785!1.05e-07!2;CL:0000955!1.05e-07!2;CL:0000818!1.05e-07!2;CL:0000954!1.05e-07!2;CL:0000816!1.05e-07!2 | |ontology_enrichment_celltype=CL:0000945!7.37e-33!24;CL:0000826!7.37e-33!24;CL:0000542!2.30e-25!53;CL:0000051!2.30e-25!53;CL:0000838!1.90e-23!52;CL:0000236!3.96e-11!14;CL:0002087!4.93e-10!119;CL:0000738!1.94e-09!140;CL:0002031!1.96e-08!124;CL:0000988!4.07e-08!182;CL:0000785!1.05e-07!2;CL:0000955!1.05e-07!2;CL:0000818!1.05e-07!2;CL:0000954!1.05e-07!2;CL:0000816!1.05e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.57e-34;24!CL:0000542;3.92e-14;53!CL:0000946;8.62e-12;1!CL:0000786;8.62e-12;1!CL:0000236;8.58e-08;13 | |ontology_enrichment_celltype_v019=CL:0000945;1.57e-34;24!CL:0000542;3.92e-14;53!CL:0000946;8.62e-12;1!CL:0000786;8.62e-12;1!CL:0000236;8.58e-08;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.02e-34,24;CL:0000826,1.02e-34,24;CL:0000838,4.03e-23,52;CL:0000542,1.18e-22,53;CL:0000051,1.18e-22,53;CL:0000236,3.11e-12,14;CL:0000946,1.81e-11,1;CL:0000786,1.81e-11,1;CL:0000980,1.81e-11,1;CL:0002087,1.71e-09,115;CL:0002031,4.93e-09,120;CL:0000988,4.25e-08,177;CL:0000738,8.69e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000051;3.92e-14;53 | |ontology_enrichment_development_v019=CL:0000051;3.92e-14;53 | ||
|ontology_enrichment_disease=DOID:0060058!2.51e-15!10 | |ontology_enrichment_disease=DOID:0060058!2.51e-15!10 | ||
|ontology_enrichment_disease_v019=DOID:630;8.62e-12;1!DOID:0050177;8.62e-12;1!DOID:0060060;8.62e-12;1!DOID:0060061;8.62e-12;1!DOID:0050427;8.62e-12;1!DOID:8691;8.62e-12;1 | |ontology_enrichment_disease_v019=DOID:630;8.62e-12;1!DOID:0050177;8.62e-12;1!DOID:0060060;8.62e-12;1!DOID:0060061;8.62e-12;1!DOID:0050427;8.62e-12;1!DOID:8691;8.62e-12;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.06e-12,1;DOID:0060061,4.06e-12,1;DOID:8691,4.06e-12,1;DOID:630,4.53e-12,1;DOID:0050177,4.53e-12,1;DOID:0050427,4.53e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!5.53e-07!35 | |ontology_enrichment_uberon=UBERON:0005409!5.53e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;8.62e-12;1!UBERON:0003703;8.62e-12;1!UBERON:0001174;8.62e-12;1!UBERON:0004914;8.62e-12;1 | |ontology_enrichment_uberon_v019=UBERON:0004913;8.62e-12;1!UBERON:0003703;8.62e-12;1!UBERON:0001174;8.62e-12;1!UBERON:0004914;8.62e-12;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,8.64e-12,1;UBERON:0003703,8.64e-12,1;UBERON:0001174,8.64e-12,1;UBERON:0004914,8.64e-12,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,3.61242593579761,3.93553906568396,0,0,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,1.77901850772711,1.70692089026603,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0.784349769176855,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22587722705226,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,3.32328974744888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,1.18608451472249,0.988511511572023,1.67075119208729,0,0,0,0.364909578431332,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,1.58499458869517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.630265458457789,0.494495150286999,0.471824806979294,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,1.47856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,1.03710588800201,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0.244209805832924,0,0,0,0,0,0,0,0,1.9234109538194 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,3.61242593579761,3.93553906568396,0,0,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,1.77901850772711,1.70692089026603,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0.784349769176855,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22587722705226,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,3.32328974744888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,1.18608451472249,0.988511511572023,1.67075119208729,0,0,0,0.364909578431332,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,1.58499458869517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.630265458457789,0.494495150286999,0.471824806979294,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,1.47856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,1.03710588800201,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0.244209805832924,0,0,0,0,0,0,0,0,1.9234109538194 | ||
|short_description=p@chr14:65768965..65768980,+ | |short_description=p@chr14:65768965..65768980,+ | ||
}} | }} |
Latest revision as of 22:00, 24 July 2015
Short description: | p@chr14:65768965..65768980, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:65768965..65768980, + |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.02e-34 | 24 |
pro-B cell | 1.02e-34 | 24 |
lymphoid lineage restricted progenitor cell | 4.03e-23 | 52 |
lymphocyte | 1.18e-22 | 53 |
common lymphoid progenitor | 1.18e-22 | 53 |
B cell | 3.11e-12 | 14 |
antibody secreting cell | 1.81e-11 | 1 |
plasma cell | 1.81e-11 | 1 |
plasmablast | 1.81e-11 | 1 |
nongranular leukocyte | 1.71e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.93e-09 | 120 |
hematopoietic cell | 4.25e-08 | 177 |
leukocyte | 8.69e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 8.64e-12 | 1 |
extrahepatic bile duct | 8.64e-12 | 1 |
common bile duct | 8.64e-12 | 1 |
duodenal papilla | 8.64e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.06e-12 | 1 |
cutaneous T cell lymphoma | 4.06e-12 | 1 |
mycosis fungoides | 4.06e-12 | 1 |
genetic disease | 4.53e-12 | 1 |
monogenic disease | 4.53e-12 | 1 |
xeroderma pigmentosum | 4.53e-12 | 1 |