FFCP PHASE1:Hg19::chr14:72944640..72944682,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:72944640..72944682,+ | |||
|coexpression_cluster_id=C2310 | |coexpression_cluster_id=C2310 | ||
|description=CAGE_peak_at_chr14:72944640..72944682,+ | |description=CAGE_peak_at_chr14:72944640..72944682,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002605!4.94e-13!3;CL:0000128!2.59e-09!7;CL:0000126!2.59e-09!7;CL:0000127!2.59e-09!7;CL:0002453!2.59e-09!7;CL:0000047!3.31e-08!8;CL:0002319!3.49e-08!25;CL:0000945!2.62e-07!24;CL:0000826!2.62e-07!24 | |ontology_enrichment_celltype=CL:0002605!4.94e-13!3;CL:0000128!2.59e-09!7;CL:0000126!2.59e-09!7;CL:0000127!2.59e-09!7;CL:0002453!2.59e-09!7;CL:0000047!3.31e-08!8;CL:0002319!3.49e-08!25;CL:0000945!2.62e-07!24;CL:0000826!2.62e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.38e-33;2!CL:0002605;8.98e-23;3!CL:0000128;2.46e-10;7!CL:0000126;2.46e-10;7!CL:0000127;2.46e-10;7!CL:0002319;4.86e-10;25 | |ontology_enrichment_celltype_v019=CL:0000047;1.38e-33;2!CL:0002605;8.98e-23;3!CL:0000128;2.46e-10;7!CL:0000126;2.46e-10;7!CL:0000127;2.46e-10;7!CL:0002319;4.86e-10;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,7.20e-23,3;CL:0000128,2.24e-10,7;CL:0000126,2.24e-10,7;CL:0000127,2.24e-10,7;CL:0002453,2.24e-10,7;CL:0002319,4.87e-10,25;CL:0000047,4.02e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.94e-14;5 | |ontology_enrichment_development_v019=UBERON:0007123;2.94e-14;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2355;2.66e-18;1!DOID:74;7.98e-10;2!DOID:0060058;1.02e-07;10 | |ontology_enrichment_disease_v019=DOID:2355;2.66e-18;1!DOID:74;7.98e-10;2!DOID:0060058;1.02e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:2355,2.66e-18,1;DOID:74,7.98e-10,2;DOID:0060058,1.02e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!7.85e-09!7;UBERON:0002370!1.00e-08!4;UBERON:0005058!1.00e-08!4;UBERON:0009113!1.00e-08!4;UBERON:0003295!1.00e-08!4;UBERON:0005562!1.00e-08!4;UBERON:0009722!1.50e-08!11;UBERON:0007690!1.50e-08!11;UBERON:0003127!1.99e-08!2 | |ontology_enrichment_uberon=UBERON:0004177!7.85e-09!7;UBERON:0002370!1.00e-08!4;UBERON:0005058!1.00e-08!4;UBERON:0009113!1.00e-08!4;UBERON:0003295!1.00e-08!4;UBERON:0005562!1.00e-08!4;UBERON:0009722!1.50e-08!11;UBERON:0007690!1.50e-08!11;UBERON:0003127!1.99e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.94e-14;5!UBERON:0000341;1.07e-09;2!UBERON:0002106;6.14e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002046;2.94e-14;5!UBERON:0000341;1.07e-09;2!UBERON:0002106;6.14e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,3.15e-14,5;UBERON:0004117,3.15e-14,5;UBERON:0007689,3.15e-14,5;UBERON:0007123,3.15e-14,5;UBERON:0003091,3.15e-14,5;UBERON:0000341,1.12e-09,2;UBERON:0009722,5.81e-07,11;UBERON:0007690,5.81e-07,11;UBERON:0002106,6.14e-07,3;UBERON:0004854,6.14e-07,3;UBERON:0009034,6.14e-07,3;UBERON:0002095,6.14e-07,3;UBERON:0004782,6.14e-07,3;UBERON:0003281,6.14e-07,3;UBERON:0009664,6.14e-07,3;UBERON:0002296,6.14e-07,3;UBERON:0005602,6.14e-07,3;UBERON:0001179,6.14e-07,3;UBERON:0006293,6.14e-07,3 | |||
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| ||
|short_description=p@chr14:72944640..72944682,+ | |short_description=p@chr14:72944640..72944682,+ | ||
}} | }} |
Latest revision as of 22:29, 24 July 2015
Short description: | p@chr14:72944640..72944682, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:72944640..72944682, + |
Coexpression cluster: | C2310_splenic_hereditary_thyroid_B_lymphangiectasia_plasma_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 7.20e-23 | 3 |
oligodendrocyte | 2.24e-10 | 7 |
macroglial cell | 2.24e-10 | 7 |
astrocyte | 2.24e-10 | 7 |
oligodendrocyte precursor cell | 2.24e-10 | 7 |
neural cell | 4.87e-10 | 25 |
neuronal stem cell | 4.02e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 3.15e-14 | 5 |
pharyngeal pouch | 3.15e-14 | 5 |
thyroid diverticulum | 3.15e-14 | 5 |
pharyngeal pouch 2 | 3.15e-14 | 5 |
thyroid primordium | 3.15e-14 | 5 |
throat | 1.12e-09 | 2 |
entire pharyngeal arch endoderm | 5.81e-07 | 11 |
early pharyngeal endoderm | 5.81e-07 | 11 |
spleen | 6.14e-07 | 3 |
gastrointestinal system mesentery | 6.14e-07 | 3 |
stomach region | 6.14e-07 | 3 |
mesentery | 6.14e-07 | 3 |
gastrointestinal system serosa | 6.14e-07 | 3 |
mesentery of stomach | 6.14e-07 | 3 |
gut mesentery | 6.14e-07 | 3 |
dorsal mesentery | 6.14e-07 | 3 |
dorsal mesogastrium | 6.14e-07 | 3 |
peritoneal cavity | 6.14e-07 | 3 |
spleen primordium | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 2.66e-18 | 1 |
hematopoietic system disease | 7.98e-10 | 2 |
lymphoma | 1.02e-07 | 10 |