FFCP PHASE1:Hg19::chr15:101445823..101445841,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:101445823..101445841,+ | |||
|coexpression_cluster_id=C908 | |||
|description=CAGE_peak_at_chr15:101445823..101445841,+ | |||
|id=chr15:101445823..101445841,+ | |||
|ontology_enrichment_celltype=CL:0000077!1.83e-15!19;CL:0000076!1.35e-12!62;CL:0000066!1.98e-12!254;CL:0002321!3.28e-11!248;CL:0000220!4.60e-11!246;CL:0002076!8.93e-09!43;CL:0000223!2.79e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000077;9.90e-17;19!CL:0000317;5.32e-09;2!CL:1000448;5.32e-09;2!CL:0002308;5.32e-09;2!CL:0002140;5.32e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,7.22e-17,19;CL:0000076,1.88e-13,63;CL:0000066,2.08e-10,253;CL:0000317,9.82e-09,2;CL:1000448,9.82e-09,2;CL:0002308,9.82e-09,2;CL:0002140,9.82e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!1.10e-12!29;DOID:120!1.59e-12!27;DOID:14566!1.61e-11!239;DOID:162!1.25e-10!235;DOID:2394!9.48e-10!14;DOID:1749!1.22e-08!14;DOID:305!2.89e-08!106;DOID:0050687!1.76e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.94e-18;14!DOID:120;8.75e-17;27!DOID:193;1.81e-15;29!DOID:4468;1.37e-09;2!DOID:1749;2.10e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.31e-18,14;DOID:120,9.33e-17,27;DOID:193,1.93e-15,29;DOID:162,6.67e-10,235;DOID:4468,1.18e-09,2;DOID:14566,1.49e-09,239;DOID:1749,2.14e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002323!5.05e-10!46;UBERON:0004458!5.41e-10!49;UBERON:0005156!2.00e-09!59;UBERON:0000990!2.00e-09!59;UBERON:0003886!2.67e-09!63;UBERON:0000464!2.93e-08!104;UBERON:0003100!3.21e-08!41;UBERON:0000992!4.12e-08!13;UBERON:0003134!6.94e-08!37;UBERON:0000474!6.94e-08!37;UBERON:0004176!1.15e-07!22;UBERON:0002553!1.73e-07!70;UBERON:0003133!1.75e-07!48;UBERON:0000466!7.99e-07!126;UBERON:0000991!8.10e-07!21;UBERON:0009196!8.10e-07!21;UBERON:0009117!8.10e-07!21;UBERON:0005564!8.10e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;7.96e-15;13!UBERON:0000991;2.20e-11;21!UBERON:0002119;1.30e-09;4!UBERON:0002419;5.32e-09;2!UBERON:0007771;5.32e-09;2!UBERON:0003297;5.32e-09;2!UBERON:0001821;5.32e-09;2!UBERON:0003487;5.32e-09;2!UBERON:0001820;5.32e-09;2!UBERON:0002118;2.92e-08;5!UBERON:0003134;4.20e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,8.28e-15,13;UBERON:0004176,1.01e-13,22;UBERON:0000991,2.08e-11,21;UBERON:0009196,2.08e-11,21;UBERON:0009117,2.08e-11,21;UBERON:0005564,2.08e-11,21;UBERON:0004458,3.00e-11,49;UBERON:0002323,2.90e-10,46;UBERON:0002119,1.18e-09,4;UBERON:0005156,4.58e-09,59;UBERON:0000990,4.58e-09,59;UBERON:0002419,9.82e-09,2;UBERON:0007771,9.82e-09,2;UBERON:0003297,9.82e-09,2;UBERON:0001821,9.82e-09,2;UBERON:0003487,9.82e-09,2;UBERON:0001820,9.82e-09,2;UBERON:0005089,9.82e-09,2;UBERON:0005088,9.82e-09,2;UBERON:0003886,2.19e-08,54;UBERON:0002118,3.44e-08,5;UBERON:0003134,1.50e-07,37;UBERON:0000474,1.50e-07,37;UBERON:0002553,3.73e-07,61;UBERON:0003133,8.86e-07,48;UBERON:0004122,9.90e-07,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,1.0007329835313,0.893922188854576,0,0,1.89515962028049,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.369363174230364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0.709336764396714,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0.337552664482532,0,0,0.276149695926898,0.646584227275248,0,0,0,0.966304265816484,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0.904902010304444,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,15.3734082300389,1.74306691720059,8.89759621520308,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.482561763430822,0,0,0,0.0821271560138091,0,0.348631135379878,0,1.80455823272956,1.19705285616665,0,0.364182336013434,0.786746489756545,0,0.0770153371044148,0,1.46139224653261,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0,0,0,1.14853107599234,1.30012049207304,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.826424576804891,0.192190067365106,0.127612712494584,0.30347334256665,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0.842516912477962,0,1.46228093778771,0,0,0.141405431953713,0,0,0,0.876901770507525,1.15755106853338,0,0.405820753925408,0.30982349809975,0,0,0,0.7133421029625,0,0,0,0,0,0.48111056362756,0.670302275535787,2.17781969722645,0,0,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,0.622079175323615,1.43789361835723,0,0,0,0,0,0,0,0,0,0,0,0.682760689712998,0.762760950878299,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,10.1279070973453,1.46909527343233,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.391329237864179,1.21390189767046,0,0,0,0,0,0,0,1.323967823502,0,0,0,0,2.08271686002157,1.86185555087318,0.783532859223623,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0,0.586654148204409,0.64127056201227,0,1.19885765749278,0.288180834308212,0.343609788497747,0,0,0,0,0,0,0.203996435272644,0.577901179803038,0,0,0,0.859530882839914,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0.303298235083296,0,1.6468607378872,0,0.144921028610825,0.298509605773748,0.233713309847224,1.10961172300523,0,0,0.889811221596536,0.228840068396924,1.20984739010591,0.310874401165561,0.443565449968902,1.75226443880073,1.34940933649081,0.776314784381297,1.24411862352257,0.797525143673985,0,5.10875870590543,8.3777146677135,2.84809513243263,0.363697318405119,4.29642228169954,0,1.19428766609585,0.800055529326307,0,0.336749488765919,0,0,0.428883182749851,0.260994291965212,2.493765180635,1.389134845943,0.489473409012935,3.58177682162975,0.308801447160972,3.28926074368061,0.706756583783524,2.70079653579281,0.337884881306145,0,0.345430341731199,0.303859956177382,0,0,0,0,0.982829546539238,0,2.53574548030352,0,0,0,0,0,0.139879507719444,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51479505104718,0.11796972334774,0,1.03973099535304,0,0,0,0.0752103283492573,0,0,0,0.327543835020193,0.443568258651136,0,0,0,0,0,0,0,0,1.91643641459393,0,0,0,0,0,0,0,0,0,0,3.00324785108587,0,0,0,0,0.215927591218621,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0.511280428554946,0,0.4582137370881,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,2.49975514047921,7.41079230602953,0.802413666891683,0,0,0,1.57771562193185,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0.332660356546013,2.11648498388534,0,1.9307228228694,0.538951212639521,0,0,0,0,0,0 | |||
|short_description=p@chr15:101445823..101445841,+ | |||
}} |
Latest revision as of 00:18, 25 July 2015
Short description: | p@chr15:101445823..101445841, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:101445823..101445841, + |
Coexpression cluster: | C908_Mesothelial_mesenchymal_squamous_mesothelioma_mucinous_oral_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 7.22e-17 | 19 |
squamous epithelial cell | 1.88e-13 | 63 |
epithelial cell | 2.08e-10 | 253 |
sebum secreting cell | 9.82e-09 | 2 |
epithelial cell of sweat gland | 9.82e-09 | 2 |
epithelial cell of skin gland | 9.82e-09 | 2 |
acinar cell of sebaceous gland | 9.82e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
female gonad | 8.28e-15 | 13 |
external genitalia | 1.01e-13 | 22 |
gonad | 2.08e-11 | 21 |
indifferent external genitalia | 2.08e-11 | 21 |
indifferent gonad | 2.08e-11 | 21 |
gonad primordium | 2.08e-11 | 21 |
body cavity or lining | 3.00e-11 | 49 |
body cavity | 2.90e-10 | 46 |
left ovary | 1.18e-09 | 4 |
reproductive structure | 4.58e-09 | 59 |
reproductive system | 4.58e-09 | 59 |
skin gland | 9.82e-09 | 2 |
epidermis gland | 9.82e-09 | 2 |
gland of integumental system | 9.82e-09 | 2 |
sebaceous gland | 9.82e-09 | 2 |
skin sebaceous gland | 9.82e-09 | 2 |
sweat gland | 9.82e-09 | 2 |
sweat gland placode | 9.82e-09 | 2 |
sebaceous gland placode | 9.82e-09 | 2 |
body cavity precursor | 2.19e-08 | 54 |
right ovary | 3.44e-08 | 5 |
female reproductive organ | 1.50e-07 | 37 |
female reproductive system | 1.50e-07 | 37 |
anatomical cavity | 3.73e-07 | 61 |
reproductive organ | 8.86e-07 | 48 |
genitourinary system | 9.90e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.31e-18 | 14 |
female reproductive organ cancer | 9.33e-17 | 27 |
reproductive organ cancer | 1.93e-15 | 29 |
cancer | 6.67e-10 | 235 |
clear cell adenocarcinoma | 1.18e-09 | 2 |
disease of cellular proliferation | 1.49e-09 | 239 |
squamous cell carcinoma | 2.14e-07 | 14 |