FFCP PHASE1:Hg19::chr15:22550911..22550920,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:22550911..22550920,+ | |||
|coexpression_cluster_id=C103 | |coexpression_cluster_id=C103 | ||
|description=CAGE_peak_at_chr15:22550911..22550920,+ | |description=CAGE_peak_at_chr15:22550911..22550920,+ | ||
|id=chr15:22550911..22550920,+ | |id=chr15:22550911..22550920,+ | ||
|ontology_enrichment_celltype=CL:0000791!6.06e-19!18;CL:0000789!6.06e-19!18;CL:0002420!6.06e-19!18;CL:0002419!6.06e-19!18;CL:0000790!6.06e-19!18;CL:0000815!1.00e-15!2;CL:0000792!1.00e-15!2;CL:0002677!1.00e-15!2;CL:0000084!2.04e-13!25;CL:0000827!2.04e-13!25;CL:0000624!1.56e-11!6;CL:0000898!8.67e-11!3;CL:0002127!2.46e-08!1;CL:0000914!2.46e-08!1;CL:0000911!2.46e-08!1;CL:0000814!2.46e-08!1;CL:0002042!2.46e-08!1;CL:0002039!2.46e-08!1;CL:0002040!2.46e-08!1;CL:0002041!2.46e-08!1;CL:0002574!3.53e-08!1 | |ontology_enrichment_celltype=CL:0000791!6.06e-19!18;CL:0000789!6.06e-19!18;CL:0002420!6.06e-19!18;CL:0002419!6.06e-19!18;CL:0000790!6.06e-19!18;CL:0000815!1.00e-15!2;CL:0000792!1.00e-15!2;CL:0002677!1.00e-15!2;CL:0000084!2.04e-13!25;CL:0000827!2.04e-13!25;CL:0000624!1.56e-11!6;CL:0000898!8.67e-11!3;CL:0002127!2.46e-08!1;CL:0000914!2.46e-08!1;CL:0000911!2.46e-08!1;CL:0000814!2.46e-08!1;CL:0002042!2.46e-08!1;CL:0002039!2.46e-08!1;CL:0002040!2.46e-08!1;CL:0002041!2.46e-08!1;CL:0002574!3.53e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000815;1.44e-09;2!CL:0000792;1.44e-09;2!CL:0002677;1.44e-09;2!CL:0000791;7.45e-09;18!CL:0000789;7.45e-09;18!CL:0002419;7.45e-09;18!CL:0000625;6.35e-07;11!CL:0000898;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.12e-09,2;CL:0000792,1.12e-09,2;CL:0002677,1.12e-09,2;CL:0000791,7.06e-09,18;CL:0000789,7.06e-09,18;CL:0002420,7.06e-09,18;CL:0002419,7.06e-09,18;CL:0000790,7.06e-09,18;CL:0000625,6.54e-07,11;CL:0000898,7.28e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;7.45e-09;18 | |||
|ontology_enrichment_disease=DOID:3151!1.27e-08!1;DOID:3149!1.27e-08!1 | |ontology_enrichment_disease=DOID:3151!1.27e-08!1;DOID:3149!1.27e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3151;8.72e-18;1!DOID:3149;8.72e-18;1!DOID:3451;1.44e-09;2!DOID:4159;1.44e-09;2!DOID:0060122;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.70e-17,1;DOID:3149,1.70e-17,1;DOID:3451,2.02e-09,2;DOID:4159,2.02e-09,2;DOID:0060122,2.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000029!1.84e-08!1;UBERON:0002372!4.07e-08!1;UBERON:0001961!4.07e-08!1;UBERON:0001744!4.07e-08!1;UBERON:0001735!4.07e-08!1 | |ontology_enrichment_uberon=UBERON:0000029!1.84e-08!1;UBERON:0002372!4.07e-08!1;UBERON:0001961!4.07e-08!1;UBERON:0001744!4.07e-08!1;UBERON:0001735!4.07e-08!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr15:22550911..22550920,+ | |short_description=p@chr15:22550911..22550920,+ | ||
}} | }} |
Latest revision as of 00:22, 25 July 2015
Short description: | p@chr15:22550911..22550920, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:22550911..22550920, + |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.12e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.12e-09 | 2 |
naive regulatory T cell | 1.12e-09 | 2 |
mature alpha-beta T cell | 7.06e-09 | 18 |
alpha-beta T cell | 7.06e-09 | 18 |
immature T cell | 7.06e-09 | 18 |
mature T cell | 7.06e-09 | 18 |
immature alpha-beta T cell | 7.06e-09 | 18 |
CD8-positive, alpha-beta T cell | 6.54e-07 | 11 |
naive T cell | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.70e-17 | 1 |
keratoacanthoma | 1.70e-17 | 1 |
skin carcinoma | 2.02e-09 | 2 |
skin cancer | 2.02e-09 | 2 |
integumentary system cancer | 2.02e-09 | 2 |