FFCP PHASE1:Hg19::chr15:30010762..30010785,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:30010762..30010785,- | |||
|coexpression_cluster_id=C52 | |coexpression_cluster_id=C52 | ||
|description=CAGE_peak_at_chr15:30010762..30010785,- | |description=CAGE_peak_at_chr15:30010762..30010785,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000746;7.42e-11;3!CL:0002615;9.90e-11;3!CL:0000737;1.82e-08;4 | |ontology_enrichment_celltype_v019=CL:0000746;7.42e-11;3!CL:0002615;9.90e-11;3!CL:0000737;1.82e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000746,7.42e-11,3;CL:0000513,7.42e-11,3;CL:0002615,1.20e-10,3;CL:0000737,1.82e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.37e-29;1!UBERON:0005754;2.37e-29;1!UBERON:0007297;2.05e-15;2!CL:0000513;7.42e-11;3 | |ontology_enrichment_development_v019=UBERON:0010226;2.37e-29;1!UBERON:0005754;2.37e-29;1!UBERON:0007297;2.05e-15;2!CL:0000513;7.42e-11;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;2.05e-15;2 | |ontology_enrichment_disease_v019=DOID:3307;2.05e-15;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3307,1.54e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-16!115;UBERON:0001049!2.64e-12!57;UBERON:0005068!2.64e-12!57;UBERON:0006241!2.64e-12!57;UBERON:0007135!2.64e-12!57;UBERON:0003075!2.47e-11!86;UBERON:0007284!2.47e-11!86;UBERON:0002346!7.93e-11!90;UBERON:0001017!1.77e-10!82;UBERON:0005743!6.16e-10!86;UBERON:0002616!1.49e-09!59;UBERON:0002780!1.67e-08!41;UBERON:0001890!1.67e-08!41;UBERON:0006240!1.67e-08!41;UBERON:0000073!2.31e-08!94;UBERON:0001016!2.31e-08!94;UBERON:0000119!2.52e-08!312;UBERON:0000025!2.77e-08!194;UBERON:0004111!3.05e-08!241;UBERON:0000483!3.36e-08!309;UBERON:0000955!3.49e-08!69;UBERON:0006238!3.49e-08!69;UBERON:0003080!3.93e-08!42;UBERON:0000477!4.54e-08!286;UBERON:0002020!1.43e-07!34;UBERON:0003528!1.43e-07!34;UBERON:0000481!1.45e-07!347;UBERON:0001893!2.11e-07!34;UBERON:0002791!5.08e-07!33 | |ontology_enrichment_uberon=UBERON:0007023!1.65e-16!115;UBERON:0001049!2.64e-12!57;UBERON:0005068!2.64e-12!57;UBERON:0006241!2.64e-12!57;UBERON:0007135!2.64e-12!57;UBERON:0003075!2.47e-11!86;UBERON:0007284!2.47e-11!86;UBERON:0002346!7.93e-11!90;UBERON:0001017!1.77e-10!82;UBERON:0005743!6.16e-10!86;UBERON:0002616!1.49e-09!59;UBERON:0002780!1.67e-08!41;UBERON:0001890!1.67e-08!41;UBERON:0006240!1.67e-08!41;UBERON:0000073!2.31e-08!94;UBERON:0001016!2.31e-08!94;UBERON:0000119!2.52e-08!312;UBERON:0000025!2.77e-08!194;UBERON:0004111!3.05e-08!241;UBERON:0000483!3.36e-08!309;UBERON:0000955!3.49e-08!69;UBERON:0006238!3.49e-08!69;UBERON:0003080!3.93e-08!42;UBERON:0000477!4.54e-08!286;UBERON:0002020!1.43e-07!34;UBERON:0003528!1.43e-07!34;UBERON:0000481!1.45e-07!347;UBERON:0001893!2.11e-07!34;UBERON:0002791!5.08e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;2.37e-29;1!UBERON:0000998;2.37e-29;1!UBERON:0006868;2.37e-29;1!UBERON:0002082;2.37e-29;1!UBERON:0004151;9.90e-11;3!UBERON:0006947;9.90e-11;3!UBERON:0004054;9.90e-11;3!UBERON:0005904;2.26e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0002084;2.37e-29;1!UBERON:0000998;2.37e-29;1!UBERON:0006868;2.37e-29;1!UBERON:0002082;2.37e-29;1!UBERON:0004151;9.90e-11;3!UBERON:0006947;9.90e-11;3!UBERON:0004054;9.90e-11;3!UBERON:0005904;2.26e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,1.78e-29,1;UBERON:0002082,1.78e-29,1;UBERON:0010226,1.78e-29,1;UBERON:0000998,2.37e-29,1;UBERON:0006868,2.37e-29,1;UBERON:0004151,8.99e-11,3;UBERON:0006947,9.90e-11,3;UBERON:0004054,9.90e-11,3;UBERON:0005904,2.26e-08,4 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0.219500570817251,0,0,0,0,0,0,0.231860809950154,0,0,0,0.380508304469197,0.790204397959275,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.710783897485092,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0.232420756919918,0.120859449591622,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0.308097234229289,0,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.242721043499027,35.9962131216255,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0.569261198172555,0,0.421996129056054,0.163232808159148,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0.664653872707185,0.330991955875499,0,0,0,0.138674673013139,0.520679215005393,0,0.0870592065804026,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0.160317640503067,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.687481272035051,0.717873024576814,0,0,0.223171457441873,0.134366944973453,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0.544813624446302,0,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,0,0.157611414598396,0,0.211200673038813,0,0.191915197319445,0,1.32418394073086,0,0.542999601753713,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.221858103073705,0.18628920882415,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0.506827321959218,0.256241518587947,0.345430341731199,0,0.138258436151731,0,0.132864840313363,0.163565394255844,0,0,0.633936370075881,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0.3062454773532,0.0642292250964595,0,0.319267718114302,0.205116364240755,0.252071696221718,0.138314504928436,0.161475645631851,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0.150420656698515,0,0,0,0,0.295712172434091,0.135075169236789,0.781078098613847,0.206686796501184,0.0634158101939068,0.546974809018219,0,0.992422356778588,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0.342976018874837,0.135939465953663,0,0.118193840883968,0.222462803784138,0,0.314231179832004,0,0,0.215927591218621,0,0.0714765441766563,0,0.116241425368125,0.173858272302579,0,0,0,0.691259661814092,0,0,0,1.27016115057279,0,0,0,0.111855431797792,0.098150233615243,0,0.647428837187895,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0.490296643507811,0,0.196308467114945,0.297046400327086,0.8453114551668,0.509781344063451,0.0939839179798536,0,0,0.178553938605658,0,0.240724100067505,0.730336388246517,0,0.286679166302903,0.157771562193185,0.0679914901909147,0,0,0.371995018166751,0,0,0.126166424835079,0.109265571963696,0.253397002022874,0.101988829741982,0.26721740526556,0.0918948995348449,0,0.151557396436479,0.267964130156178,0,0.310298987585686,0,0.23806443146374,0,0.0620747142958579,0,0.190941474834495,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0.213454691755431,1.9307228228694,0.179650404213174,0,0,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0.219500570817251,0,0,0,0,0,0,0.231860809950154,0,0,0,0.380508304469197,0.790204397959275,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.710783897485092,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0.232420756919918,0.120859449591622,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0.308097234229289,0,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.242721043499027,35.9962131216255,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0.569261198172555,0,0.421996129056054,0.163232808159148,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0.664653872707185,0.330991955875499,0,0,0,0.138674673013139,0.520679215005393,0,0.0870592065804026,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0.160317640503067,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.687481272035051,0.717873024576814,0,0,0.223171457441873,0.134366944973453,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0.544813624446302,0,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,0,0.157611414598396,0,0.211200673038813,0,0.191915197319445,0,1.32418394073086,0,0.542999601753713,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.221858103073705,0.18628920882415,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0.506827321959218,0.256241518587947,0.345430341731199,0,0.138258436151731,0,0.132864840313363,0.163565394255844,0,0,0.633936370075881,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0.3062454773532,0.0642292250964595,0,0.319267718114302,0.205116364240755,0.252071696221718,0.138314504928436,0.161475645631851,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0.150420656698515,0,0,0,0,0.295712172434091,0.135075169236789,0.781078098613847,0.206686796501184,0.0634158101939068,0.546974809018219,0,0.992422356778588,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0.342976018874837,0.135939465953663,0,0.118193840883968,0.222462803784138,0,0.314231179832004,0,0,0.215927591218621,0,0.0714765441766563,0,0.116241425368125,0.173858272302579,0,0,0,0.691259661814092,0,0,0,1.27016115057279,0,0,0,0.111855431797792,0.098150233615243,0,0.647428837187895,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0.490296643507811,0,0.196308467114945,0.297046400327086,0.8453114551668,0.509781344063451,0.0939839179798536,0,0,0.178553938605658,0,0.240724100067505,0.730336388246517,0,0.286679166302903,0.157771562193185,0.0679914901909147,0,0,0.371995018166751,0,0,0.126166424835079,0.109265571963696,0.253397002022874,0.101988829741982,0.26721740526556,0.0918948995348449,0,0.151557396436479,0.267964130156178,0,0.310298987585686,0,0.23806443146374,0,0.0620747142958579,0,0.190941474834495,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0.213454691755431,1.9307228228694,0.179650404213174,0,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p@chr15:30010762..30010785,- | |short_description=p@chr15:30010762..30010785,- | ||
}} | }} |
Latest revision as of 00:38, 25 July 2015
Short description: | p@chr15:30010762..30010785, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:30010762..30010785, - |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 7.42e-11 | 3 |
cardiac muscle myoblast | 7.42e-11 | 3 |
adipocyte of omentum tissue | 1.20e-10 | 3 |
striated muscle cell | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 1.78e-29 | 1 |
cardiac ventricle | 1.78e-29 | 1 |
future cardiac ventricle | 1.78e-29 | 1 |
seminal vesicle | 2.37e-29 | 1 |
seminal fluid secreting gland | 2.37e-29 | 1 |
cardiac chamber | 8.99e-11 | 3 |
male genital duct | 9.90e-11 | 3 |
internal male genitalia | 9.90e-11 | 3 |
duct of male reproductive system | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.54e-15 | 2 |