FFCP PHASE1:Hg19::chr15:33023369..33023426,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:33023369..33023426,- to FFCP PHASE1:Hg19::chr15:33023369..33023426,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_CU686887_5end | |||
|cluster_id=chr15:33023369..33023426,- | |||
|coexpression_cluster_id=C316 | |||
|description=CAGE_peak_1_at_CU686887_5end | |||
|id=chr15:33023369..33023426,- | |||
|ontology_enrichment_celltype=CL:0000055!2.29e-37!180;CL:0000057!6.83e-24!75;CL:0000680!1.14e-16!57;CL:0000056!1.14e-16!57;CL:0000355!1.14e-16!57;CL:0000187!7.49e-15!54;CL:0000192!1.70e-14!42;CL:0000514!1.70e-14!42;CL:0000048!3.88e-14!430;CL:0002620!6.45e-14!23;CL:0000723!3.11e-13!436;CL:0000183!4.20e-13!59;CL:0000359!9.02e-13!32;CL:0000034!9.54e-13!444;CL:0000393!1.17e-12!60;CL:0000211!1.17e-12!60;CL:0002334!1.13e-10!12;CL:0002371!1.49e-08!591;CL:0002539!1.45e-07!10;CL:0000144!4.62e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.92e-17;23!CL:0002334;8.34e-15;12!CL:0002320;4.56e-10;188!CL:0000134;1.59e-09;55!CL:0000057;3.33e-09;73!CL:0000048;6.29e-09;58!CL:0000723;1.25e-08;61!CL:0000192;8.09e-08;43!CL:0000359;1.30e-07;32!CL:0000499;1.90e-07;28!CL:0002539;2.47e-07;10!CL:0002559;2.49e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.03e-26,76;CL:0000048,4.52e-22,427;CL:0000723,3.11e-21,433;CL:0000034,3.71e-20,441;CL:0002620,5.92e-17,23;CL:0002334,8.60e-15,12;CL:0002320,2.78e-13,361;CL:0000680,2.80e-13,58;CL:0000056,2.80e-13,58;CL:0000355,2.80e-13,58;CL:0000134,1.49e-11,354;CL:0000192,2.39e-11,43;CL:0000514,2.39e-11,43;CL:0000187,3.59e-11,55;CL:0000393,2.92e-09,61;CL:0000211,2.92e-09,61;CL:0000219,3.61e-09,386;CL:0000359,1.15e-07,32;CL:0000499,2.00e-07,28;CL:0002539,2.24e-07,10;CL:0002559,2.59e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;8.09e-08;43!CL:0000355;9.85e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!2.61e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.56e-10;14!DOID:17;1.12e-07;5!DOID:450;1.12e-07;5!DOID:66;1.12e-07;5!DOID:423;1.12e-07;5!DOID:0080000;1.12e-07;5!DOID:11722;1.12e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.03e-10,14;DOID:17,1.12e-07,5;DOID:450,1.12e-07,5;DOID:66,1.12e-07,5;DOID:423,1.12e-07,5;DOID:0080000,1.12e-07,5;DOID:11722,1.12e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.58e-20!83;UBERON:0002329!1.58e-20!83;UBERON:0003077!1.58e-20!83;UBERON:0003059!1.58e-20!83;UBERON:0007282!1.58e-20!83;UBERON:0009618!1.58e-20!83;UBERON:0007285!1.58e-20!83;UBERON:0004290!2.66e-19!70;UBERON:0000486!2.01e-16!82;UBERON:0001134!2.27e-15!61;UBERON:0002036!2.27e-15!61;UBERON:0003082!2.27e-15!61;UBERON:0002385!4.54e-15!63;UBERON:0001015!4.54e-15!63;UBERON:0000383!4.54e-15!63;UBERON:0005256!6.08e-14!143;UBERON:0002199!7.97e-12!45;UBERON:0002416!7.97e-12!45;UBERON:0000475!2.07e-11!365;UBERON:0002097!2.84e-10!40;UBERON:0002100!5.15e-09!216;UBERON:0001135!1.06e-08!15;UBERON:0003102!1.24e-08!95;UBERON:0001637!1.30e-07!42;UBERON:0003509!1.30e-07!42;UBERON:0004572!1.30e-07!42;UBERON:0004237!1.45e-07!10;UBERON:0004695!1.45e-07!10;UBERON:0002111!1.45e-07!10;UBERON:0004178!1.45e-07!10;UBERON:0004573!1.47e-07!33;UBERON:0004571!1.47e-07!33;UBERON:0002384!5.37e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.38e-12;41!UBERON:0004457;5.64e-11;9!UBERON:0000042;5.64e-11;9!UBERON:0002199;5.69e-11;46!UBERON:0002416;5.69e-11;46!UBERON:0002385;5.28e-09;31!UBERON:0001015;5.28e-09;31!UBERON:0000383;5.28e-09;31!UBERON:0002384;6.81e-09;198!UBERON:0003102;9.90e-09;50!UBERON:0001135;1.99e-08;15!UBERON:0003688;2.01e-08;6!UBERON:0002358;2.01e-08;6!UBERON:0003684;2.01e-08;6!UBERON:0001178;2.01e-08;6!UBERON:0004905;2.59e-08;8!UBERON:0000982;2.59e-08;8!UBERON:0004770;2.59e-08;8!UBERON:0002204;4.36e-08;70!UBERON:0000992;2.11e-07;13!UBERON:0004237;2.47e-07;10!UBERON:0004695;2.47e-07;10!UBERON:0002111;2.47e-07;10!UBERON:0004178;2.47e-07;10!UBERON:0002073;2.49e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,7.60e-17,46;UBERON:0002416,7.60e-17,46;UBERON:0007524,2.43e-16,73;UBERON:0002329,7.32e-16,71;UBERON:0003059,7.32e-16,71;UBERON:0007282,7.32e-16,71;UBERON:0004290,7.32e-16,71;UBERON:0009618,7.32e-16,71;UBERON:0003077,1.79e-15,72;UBERON:0007285,1.79e-15,72;UBERON:0002097,2.07e-15,41;UBERON:0000486,1.41e-14,83;UBERON:0007503,3.38e-14,78;UBERON:0002384,7.83e-14,371;UBERON:0001134,8.34e-12,62;UBERON:0002036,8.34e-12,62;UBERON:0003082,8.34e-12,62;UBERON:0002385,3.82e-11,64;UBERON:0001015,3.82e-11,64;UBERON:0000383,3.82e-11,64;UBERON:0003102,1.22e-10,99;UBERON:0005256,3.91e-10,122;UBERON:0001135,1.87e-08,15;UBERON:0003688,1.99e-08,6;UBERON:0002358,1.99e-08,6;UBERON:0003684,1.99e-08,6;UBERON:0001178,1.99e-08,6;UBERON:0004905,2.17e-08,8;UBERON:0000982,2.17e-08,8;UBERON:0004770,2.17e-08,8;UBERON:0003104,3.82e-08,160;UBERON:0009142,3.82e-08,160;UBERON:0004457,1.10e-07,12;UBERON:0000042,1.10e-07,12;UBERON:0000992,1.59e-07,13;UBERON:0004237,2.24e-07,10;UBERON:0004695,2.24e-07,10;UBERON:0002111,2.24e-07,10;UBERON:0004178,2.24e-07,10;UBERON:0002073,2.59e-07,5;UBERON:0005086,2.59e-07,5;UBERON:0000926,3.46e-07,315;UBERON:0004120,3.46e-07,315;UBERON:0006603,3.46e-07,315;UBERON:0000490,9.42e-07,148 | |||
|phase1_expression=19.6212649612201,10.2768251467672,6.90676580070259,21.0153926541574,20.113249249228,60.1913581629254,15.1979926900986,0.631719873426831,0,0,0,0,0,6.06455129504228,13.9186897805725,22.8590549793604,21.6970030088632,24.1002329827833,25.3725055371064,0.246242116153576,0.612002073732759,0,0,0,1.75759695432724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,4.01070328508712,2.02785126545153,0,9.73269740605272,0.378139268656271,0.221729397462564,0.87834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.600297623782,0.886413581652058,4.36950296683622,11.4734648299525,2.12801029319014,2.80338800071154,0,1.97334038733728,0.311211035399766,0.67355336034844,0.326923806226917,0,2.30470369792,0,8.42832207441865,0,5.08125513876124,0.939475989150119,2.42809416552197,2.24721290723598,0.204154171254893,1.71968044236475,0.206651562351531,9.50402285825643,32.1447008062124,0,0,0.841680569770331,0,0,15.3642167308293,44.4407303908579,26.2916603086544,0.226864366320042,28.8817313459068,19.4337223824896,27.551147150743,43.5132089322383,7.72893969288292,15.2007918626921,20.2867373401433,8.43881661206331,15.7847948361142,23.4763410047026,22.460175268721,0.646584227275248,37.9860263992777,13.1985248678209,31.1991489851297,0,0,0,0,0,0,0.10366105501537,0.504641701751257,0,42.2413737290503,65.6105756956743,4.14404764057442,13.9310378409594,14.4375896333917,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,2.88662684050547,0,0.821860859650752,0,0,0,0,0,0,0.468008530278475,0.743155811443641,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.719792448923265,0,0,0,0,1.24675085895615,1.93907573636667,0,6.762422020448,18.6156681609409,12.4808924293639,0.771622122786426,1.41849132023278,0.266422179016099,3.14551586047925,0,0,4.23457039581856,2.13235169245527,0,0.602878754119172,0.871533458600294,0,0,0,0,0.718874566474748,0,1.42636905040718,9.70034754672781,5.75333703141074,12.1761455003129,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,2.08575535922538,4.50153468953709,1.89885516589815,15.1818728917489,31.0466440507061,50.9378800559609,18.0397779088778,0,0,2.0694614258501,5.31380478828349,3.31864503375066,4.77859879574456,0.587403472388222,0,0,0,0,0,0,0,17.8637621629519,10.4354141835882,36.4858122762996,15.5048370599398,9.21073048320066,35.5487165727373,40.0728779401476,10.0236300971726,6.92490728721196,5.17401082886998,6.23105315020345,15.5721907136345,0.120859449591622,0,0,1.49258782613989,5.64482620820823,6.03172308813351,0,0.15403067420883,0,0,0.73886140225013,0,0,1.51141141271498,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0.976135183992909,0.103041011647722,0.457847324091717,0.660075999364704,0,0,12.8547143875328,1.06337790121334,0.154048617114644,0,4.27293374702045,0.322260734604821,0.290033387828457,1.19317278382541,1.24644849905432,0,0,0,0,5.57814659156743,17.9443037693465,1.3940745403212,0.616067160352178,0.532306030317022,1.73986598415015,1.29726953372744,0.143124886741991,2.97726695487734,4.11293252134344,4.5751246541718,1.535386747868,1.71175595213568,0.636406495851874,0.78494864019923,11.1520923701655,6.58888871366531,7.06874414074119,0.808729926293264,0,8.8464275810186,0,11.6982475023017,5.28250733783777,4.23149725364756,2.54529777516683,0,0.551365343546124,0,0.438450885253763,0,1.31178950409327,5.47858017799301,1.54911749049875,0.563391205064483,0.430234056612155,0.294747123039363,2.1400263088875,0,5.69990615303693,9.22025700287725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,2.22617410045812,0,0,0,0.276283915531148,0,0,0,25.5052461882682,0,0,0,0.394573622547734,0,3.33410970433911,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.265372693510018,0.611030144933625,0,0,0,0.404406797884062,0.802577647298789,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0,0,1.9871461170299,0.0633107959558787,0,0,1.06726497369676,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0.717873024576814,0,0,0,0,94.7588693716521,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,1.62899880526114,6.04955043840887,1.30634944043764,0,0,6.81552087141687,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0.895528817321244,5.84283274618061,0,5.3032841477025,1.0062716070103,4.44905610798268,2.51724075236616,1.20984739010591,7.46098562797346,18.6297488986939,6.8497609880392,4.49803112163605,4.9684146200403,7.879417948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| ||
|short_description=p1@CU686887 | |||
}} | }} |
Latest revision as of 00:48, 25 July 2015
Short description: | p1@CU686887 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU686887_5end |
Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
Association with transcript: | 18bp_to_CU686887_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.03e-26 | 76 |
multi fate stem cell | 4.52e-22 | 427 |
somatic stem cell | 3.11e-21 | 433 |
stem cell | 3.71e-20 | 441 |
skin fibroblast | 5.92e-17 | 23 |
preadipocyte | 8.60e-15 | 12 |
connective tissue cell | 2.78e-13 | 361 |
muscle precursor cell | 2.80e-13 | 58 |
myoblast | 2.80e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.80e-13 | 58 |
mesenchymal cell | 1.49e-11 | 354 |
smooth muscle cell | 2.39e-11 | 43 |
smooth muscle myoblast | 2.39e-11 | 43 |
muscle cell | 3.59e-11 | 55 |
electrically responsive cell | 2.92e-09 | 61 |
electrically active cell | 2.92e-09 | 61 |
motile cell | 3.61e-09 | 386 |
vascular associated smooth muscle cell | 1.15e-07 | 32 |
stromal cell | 2.00e-07 | 28 |
aortic smooth muscle cell | 2.24e-07 | 10 |
hair follicle cell | 2.59e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.03e-10 | 14 |
musculoskeletal system disease | 1.12e-07 | 5 |
myotonic disease | 1.12e-07 | 5 |
muscle tissue disease | 1.12e-07 | 5 |
myopathy | 1.12e-07 | 5 |
muscular disease | 1.12e-07 | 5 |
myotonic dystrophy | 1.12e-07 | 5 |