FFCP PHASE1:Hg19::chr15:33025787..33025805,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:33025787..33025805,+
|short_description=p@chr15:33025787..33025805,+
|description=CAGE_peak_at_chr15:33025787..33025805,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:33025787..33025805,+ | |||
|coexpression_cluster_id=C316 | |||
|description=CAGE_peak_at_chr15:33025787..33025805,+ | |||
|id=chr15:33025787..33025805,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.16e-21!75;CL:0000055!1.23e-20!180;CL:0002620!6.69e-17!23;CL:0002334!1.29e-16!12;CL:0000048!8.04e-12!430;CL:0000723!2.85e-11!436;CL:0000034!5.53e-11!444;CL:0002320!1.28e-07!365;CL:0000499!1.34e-07!27;CL:0000134!2.12e-07!358;CL:0000192!9.16e-07!42;CL:0000514!9.16e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.85e-24;23!CL:0002334;4.52e-18;12!CL:0002579;7.09e-10;3!CL:0000135;1.10e-09;3!CL:0000388;1.10e-09;3!CL:0002580;3.17e-09;3!CL:0000057;5.74e-09;73!CL:0002539;4.79e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.91e-28,76;CL:0002620,9.25e-24,23;CL:0002334,3.07e-18,12;CL:0000048,7.57e-10,427;CL:0002579,8.24e-10,3;CL:0000135,8.48e-10,3;CL:0000388,8.48e-10,3;CL:0000723,1.61e-09,433;CL:0000134,1.65e-09,354;CL:0002580,2.33e-09,3;CL:0000034,4.25e-09,441;CL:0002320,4.35e-09,361;CL:0000219,3.55e-08,386;CL:0002539,3.75e-07,10;CL:0002617,8.27e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.58e-09!14;DOID:17!2.92e-08!5;DOID:450!2.92e-08!5;DOID:66!2.92e-08!5;DOID:423!2.92e-08!5;DOID:0080000!2.92e-08!5;DOID:11722!2.92e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;2.26e-14;5!DOID:450;2.26e-14;5!DOID:66;2.26e-14;5!DOID:423;2.26e-14;5!DOID:0080000;2.26e-14;5!DOID:11722;2.26e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.15e-14,5;DOID:450,2.15e-14,5;DOID:66,2.15e-14,5;DOID:423,2.15e-14,5;DOID:0080000,2.15e-14,5;DOID:11722,2.15e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.86e-11!45;UBERON:0002416!1.86e-11!45;UBERON:0002097!4.31e-11!40;UBERON:0003102!1.01e-09!95;UBERON:0003688!3.21e-09!6;UBERON:0002358!3.21e-09!6;UBERON:0003684!3.21e-09!6;UBERON:0001178!3.21e-09!6;UBERON:0004457!8.82e-09!12;UBERON:0000042!8.82e-09!12;UBERON:0002384!3.65e-08!375;UBERON:0000914!1.04e-07!83;UBERON:0002329!1.04e-07!83;UBERON:0003077!1.04e-07!83;UBERON:0003059!1.04e-07!83;UBERON:0007282!1.04e-07!83;UBERON:0009618!1.04e-07!83;UBERON:0007285!1.04e-07!83;UBERON:0000475!3.68e-07!365;UBERON:0004458!5.81e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.46e-15;41!UBERON:0002199;7.20e-13;46!UBERON:0002416;7.20e-13;46!UBERON:0004457;4.74e-11;9!UBERON:0000042;4.74e-11;9!UBERON:0007846;1.10e-09;3!UBERON:0000043;1.10e-09;3!UBERON:0007845;1.10e-09;3!UBERON:0003102;2.08e-09;50!UBERON:0003688;2.44e-08;6!UBERON:0002358;2.44e-08;6!UBERON:0003684;2.44e-08;6!UBERON:0001178;2.44e-08;6!UBERON:0005406;1.71e-07;2!UBERON:0004237;4.79e-07;10!UBERON:0004695;4.79e-07;10!UBERON:0002111;4.79e-07;10!UBERON:0004178;4.79e-07;10!UBERON:0000310;6.03e-07;10!UBERON:0002384;7.09e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,8.40e-20,41;UBERON:0002199,3.92e-19,46;UBERON:0002416,3.92e-19,46;UBERON:0003102,3.83e-10,99;UBERON:0002384,7.86e-10,371;UBERON:0007846,8.48e-10,3;UBERON:0000043,8.48e-10,3;UBERON:0007845,8.48e-10,3;UBERON:0003688,3.04e-08,6;UBERON:0002358,3.04e-08,6;UBERON:0003684,3.04e-08,6;UBERON:0001178,3.04e-08,6;UBERON:0004457,6.08e-08,12;UBERON:0000042,6.08e-08,12;UBERON:0005406,1.61e-07,2;UBERON:0004237,3.75e-07,10;UBERON:0004695,3.75e-07,10;UBERON:0002111,3.75e-07,10;UBERON:0004178,3.75e-07,10;UBERON:0000310,4.77e-07,10 | |||
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| ||
|short_description=p@chr15:33025787..33025805,+ | |||
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Latest revision as of 00:50, 25 July 2015
Short description: | p@chr15:33025787..33025805, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:33025787..33025805, + |
Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.91e-28 | 76 |
skin fibroblast | 9.25e-24 | 23 |
preadipocyte | 3.07e-18 | 12 |
multi fate stem cell | 7.57e-10 | 427 |
omentum preadipocyte | 8.24e-10 | 3 |
fibrocyte | 8.48e-10 | 3 |
tendon cell | 8.48e-10 | 3 |
somatic stem cell | 1.61e-09 | 433 |
mesenchymal cell | 1.65e-09 | 354 |
preadipocyte of the breast | 2.33e-09 | 3 |
stem cell | 4.25e-09 | 441 |
connective tissue cell | 4.35e-09 | 361 |
motile cell | 3.55e-08 | 386 |
aortic smooth muscle cell | 3.75e-07 | 10 |
adipocyte of breast | 8.27e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin of body | 8.40e-20 | 41 |
integument | 3.92e-19 | 46 |
integumental system | 3.92e-19 | 46 |
surface structure | 3.83e-10 | 99 |
connective tissue | 7.86e-10 | 371 |
dense regular connective tissue | 8.48e-10 | 3 |
tendon | 8.48e-10 | 3 |
regular connective tissue | 8.48e-10 | 3 |
omentum | 3.04e-08 | 6 |
peritoneum | 3.04e-08 | 6 |
abdominal cavity | 3.04e-08 | 6 |
visceral peritoneum | 3.04e-08 | 6 |
cavity lining | 6.08e-08 | 12 |
serous membrane | 6.08e-08 | 12 |
perirenal fat | 1.61e-07 | 2 |
blood vessel smooth muscle | 3.75e-07 | 10 |
arterial system smooth muscle | 3.75e-07 | 10 |
artery smooth muscle tissue | 3.75e-07 | 10 |
aorta smooth muscle tissue | 3.75e-07 | 10 |
breast | 4.77e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.15e-14 | 5 |
myotonic disease | 2.15e-14 | 5 |
muscle tissue disease | 2.15e-14 | 5 |
myopathy | 2.15e-14 | 5 |
muscular disease | 2.15e-14 | 5 |
myotonic dystrophy | 2.15e-14 | 5 |