FFCP PHASE1:Hg19::chr15:41136463..41136477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:41136463..41136477,- | |||
|description=CAGE_peak_at_chr15:41136463..41136477,- | |description=CAGE_peak_at_chr15:41136463..41136477,- | ||
|id=chr15:41136463..41136477,- | |id=chr15:41136463..41136477,- | ||
|ontology_enrichment_celltype=CL:0000066!4.29e-23!254;CL:0002076!4.92e-18!43;CL:0000223!8.03e-12!59;CL:0002368!2.32e-09!13;CL:0002251!1.22e-07!21 | |ontology_enrichment_celltype=CL:0000066!4.29e-23!254;CL:0002076!4.92e-18!43;CL:0000223!8.03e-12!59;CL:0002368!2.32e-09!13;CL:0002251!1.22e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0000244;1.14e-10;4!CL:0000731;1.14e-10;4!CL:0002076;7.49e-10;42!CL:0002368;7.04e-09;13!CL:0002149;1.14e-07;6!CL:0002255;1.14e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.23e-13,42;CL:0000244,8.04e-11,4;CL:0000731,8.04e-11,4;CL:0000223,5.16e-09,58;CL:0002368,7.25e-09,13;CL:0000066,5.05e-08,253;CL:0002149,1.11e-07,6;CL:0002255,1.11e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.08e-10;2 | |||
|ontology_enrichment_disease=DOID:305!2.40e-11!106;DOID:1749!6.01e-09!14;DOID:0050687!9.25e-09!143;DOID:299!4.86e-08!25 | |ontology_enrichment_disease=DOID:305!2.40e-11!106;DOID:1749!6.01e-09!14;DOID:0050687!9.25e-09!143;DOID:299!4.86e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:5093;3.65e-19;4!DOID:1612;3.65e-19;4!DOID:3001;1.14e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.77e-19,4;DOID:1612,3.77e-19,4;DOID:3001,1.11e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.19e-15!169;UBERON:0000925!1.19e-15!169;UBERON:0006595!1.19e-15!169;UBERON:0001007!1.50e-11!155;UBERON:0001555!1.50e-11!155;UBERON:0007026!1.50e-11!155;UBERON:0000464!4.76e-11!104;UBERON:0001004!4.61e-10!72;UBERON:0005153!8.41e-10!37;UBERON:0004921!1.31e-09!129;UBERON:0004185!1.31e-09!129;UBERON:0006554!2.48e-09!44;UBERON:0000481!5.78e-09!347;UBERON:0001008!5.97e-09!45;UBERON:0000466!7.83e-09!126;UBERON:0005178!1.55e-08!34;UBERON:0002224!1.55e-08!34;UBERON:0005911!1.90e-08!82;UBERON:0005181!4.12e-08!35;UBERON:0000077!5.71e-08!130;UBERON:0005177!1.59e-07!107;UBERON:0000062!1.71e-07!511;UBERON:0000065!2.08e-07!53;UBERON:0005157!9.68e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0004175;8.17e-10;21!UBERON:0000365;1.25e-08;5!UBERON:0000310;1.03e-07;10!UBERON:0002110;1.83e-07;3!UBERON:0005910;2.92e-07;6!UBERON:0001443;5.14e-07;11!UBERON:0006947;6.70e-07;3!UBERON:0004054;6.70e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,9.51e-09,5;UBERON:0000080,1.30e-08,9;UBERON:0002120,1.30e-08,9;UBERON:0004875,1.30e-08,9;UBERON:0005721,1.30e-08,9;UBERON:0005754,1.30e-08,9;UBERON:0007297,1.30e-08,9;UBERON:0004175,3.67e-08,25;UBERON:0000310,1.04e-07,10;UBERON:0002110,1.96e-07,3;UBERON:0006242,1.96e-07,3;UBERON:0005910,2.32e-07,6;UBERON:0006947,3.44e-07,3;UBERON:0004054,3.44e-07,3;UBERON:0004876,4.73e-07,11;UBERON:0001443,5.20e-07,11;UBERON:0004119,6.97e-07,160;UBERON:0000925,6.97e-07,160;UBERON:0006595,6.97e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,4.88460817580699,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0,0,0,0.90361775633475,0.739508020333575,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0.472674085820339,0.221729397462564,0.527008714158756,0.327447688744282,0.728590576585084,0.741568885568859,0.324547393654683,0.522389211897802,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.57978255948989,0.818238361772504,0.860413786167011,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0,0.185176890317059,0,0,1.44331342025273,0,0.117408694235822,0,0,0,2.37061319387782,6.00940313466411,0,0.234004265139238,0.148631162288728,0.93733833986777,0.839910640994298,0.850650583454319,0.0895585227028483,0.290633938513962,1.53353071666084,0,0,0,0,0.37872730027914,0,0,0,1.71072446022705,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,1.40354529212299,0.736647911487171,0,0,0,0,0.15403067420883,0,0,0.422206515571503,0,0.170093705276516,0,1.54227252690289,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,1.32227932288782,1.53752053892085,0.765676274967505,2.8324178639554,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.0962221127255121,0.670302275535787,2.17781969722645,0.0941438007767792,1.29151611801369,1.68471475667626,1.7737206141467,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0.37428108081644,0,0,0,0,0.71623345421307,0,0.307160702099232,0,0.281338832821026,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0.311039587661807,0.718946809178615,0.358042349351218,0,0.295930216910801,0,0,0,0,0,1.30213880542617,1.57427999993152,0,0.227586896570999,2.2882828526349,0.945550727071745,0,0,0,0,0,0,0,0.295547618953547,0,0,1.25481369850743,0.615602068030377,0,0.23056390438806,0.179515288819544,0.869178975376065,0,0,0,0,0,0,0.225595660617181,0,0.335643173951685,0,0,0,0.163232808159148,0,0,0,0.619202951523374,0.611030144933625,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0.300646838828985,0.311064574191741,0,0,0,0,1.42304773014896,0,2.2562765983567,0.979923974143776,0.522355239482415,1.92199335066233,0,0,0,0,0.775912131907355,0.0882561266915003,0.90392296312213,0,0,0,2.15106521008283,0.561111741760736,2.56143593687223,0.19980960958213,0.288180834308212,0,0,0,0,2.82832841540154,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.643012593860077,0.550157746388935,0,0,0,0,0,0.394028536495991,0.104909176269996,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0.704815022316672,0.427149650270779,0.314408610199332,2.48543433208317,0,0,0.243585196761792,1.91502377331055,0,0,0,0,1.09937867375164,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0.151649117541648,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0.633936370075881,0,0.213383459388282,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27592034051333,0,0.183428598521679,0.693153996902029,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0.739280431085226,0,0,0,0.0634158101939068,0,0,0,0,2.04419884223352,0,0.336283722218824,1.21393120847326,0.455324382702595,0.0887023701626388,0.115233987555779,0,0,0,0.118193840883968,0.222462803784138,0.39246546425257,0.157115589916002,0.280272163313789,0,0.215927591218621,0,0.285906176706625,0,0,0,0,0,0.51215543128185,1.38251932362818,0.430227358820278,0,0,1.69354820076372,2.52017555398455,0,0,0.111855431797792,0.785201868921944,0.121917924982269,0,0,0,0,1.40363678077263,0.397901550322736,0.356760272332706,0.11294608203896,0,0.603851374266694,0.694567422971502,0.874238242015829,0.470317296361523,0,0.471353094203252,0,0,0,0,0,0.128915775947154,0,0.71421575442263,1.05868461514708,0.320965466756673,2.92134555298607,1.37618785021362,0,0.157771562193185,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0.713921808193872,0,0.0918948995348449,0,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| ||
|short_description=p@chr15:41136463..41136477,- | |short_description=p@chr15:41136463..41136477,- | ||
}} | }} |
Latest revision as of 01:32, 25 July 2015
Short description: | p@chr15:41136463..41136477, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:41136463..41136477, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.23e-13 | 42 |
transitional epithelial cell | 8.04e-11 | 4 |
urothelial cell | 8.04e-11 | 4 |
endodermal cell | 5.16e-09 | 58 |
respiratory epithelial cell | 7.25e-09 | 13 |
epithelial cell | 5.05e-08 | 253 |
epithelial cell of uterus | 1.11e-07 | 6 |
stromal cell of endometrium | 1.11e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
urothelium | 9.51e-09 | 5 |
mesonephros | 1.30e-08 | 9 |
pronephros | 1.30e-08 | 9 |
nephrogenic cord | 1.30e-08 | 9 |
pronephric mesoderm | 1.30e-08 | 9 |
rostral part of nephrogenic cord | 1.30e-08 | 9 |
presumptive pronephric mesoderm | 1.30e-08 | 9 |
internal genitalia | 3.67e-08 | 25 |
breast | 1.04e-07 | 10 |
gallbladder | 1.96e-07 | 3 |
gall bladder primordium | 1.96e-07 | 3 |
transitional epithelium | 2.32e-07 | 6 |
male genital duct | 3.44e-07 | 3 |
internal male genitalia | 3.44e-07 | 3 |
urogenital ridge | 4.73e-07 | 11 |
chest | 5.20e-07 | 11 |
endoderm-derived structure | 6.97e-07 | 160 |
endoderm | 6.97e-07 | 160 |
presumptive endoderm | 6.97e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.77e-19 | 4 |
breast cancer | 3.77e-19 | 4 |
female reproductive endometrioid cancer | 1.11e-07 | 6 |