FFCP PHASE1:Hg19::chr15:48703363..48703377,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:48703363..48703377,- to FFCP PHASE1:Hg19::chr15:48703363..48703377,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:48703363..48703377,- | |||
|coexpression_cluster_id=C834 | |||
|description=CAGE_peak_at_chr15:48703363..48703377,- | |||
|id=chr15:48703363..48703377,- | |||
|ontology_enrichment_celltype=CL:0000055!6.44e-28!180;CL:0000057!3.94e-24!75;CL:0000048!1.53e-11!430;CL:0002620!4.30e-11!23;CL:0000723!6.69e-11!436;CL:0000034!8.96e-10!444;CL:0000680!9.99e-10!57;CL:0000056!9.99e-10!57;CL:0000355!9.99e-10!57;CL:0002334!1.14e-09!12;CL:0000499!4.10e-09!27;CL:0000144!4.70e-09!625;CL:0002371!7.90e-09!591;CL:0000187!1.82e-08!54;CL:0000183!7.85e-08!59;CL:0000393!1.96e-07!60;CL:0000211!1.96e-07!60;CL:0000192!5.14e-07!42;CL:0000514!5.14e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.78e-14;12!CL:0000134;1.28e-12;55!CL:0002620;2.04e-11;23!CL:0000723;2.59e-11;61!CL:0000048;1.35e-10;58!CL:0000057;9.48e-10;73!CL:0000349;1.12e-09;19!CL:0000034;8.13e-09;69!CL:0002320;1.24e-08;188!CL:0000499;3.23e-08;28!CL:0000153;1.20e-07;9!CL:0000447;1.20e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.54e-25,76;CL:0000048,8.90e-19,427;CL:0000723,5.06e-18,433;CL:0000034,4.73e-17,441;CL:0002334,1.33e-14,12;CL:0002320,8.43e-13,361;CL:0000134,1.08e-12,354;CL:0002620,1.73e-11,23;CL:0000219,4.28e-10,386;CL:0000349,1.17e-09,19;CL:0000499,3.19e-08,28;CL:0000153,1.35e-07,9;CL:0000447,1.35e-07,9;CL:0000680,8.01e-07,58;CL:0000056,8.01e-07,58;CL:0000355,8.01e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.06e-07;5!DOID:450;1.06e-07;5!DOID:66;1.06e-07;5!DOID:423;1.06e-07;5!DOID:0080000;1.06e-07;5!DOID:11722;1.06e-07;5!DOID:2394;3.18e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.09e-07,5;DOID:450,1.09e-07,5;DOID:66,1.09e-07,5;DOID:423,1.09e-07,5;DOID:0080000,1.09e-07,5;DOID:11722,1.09e-07,5;DOID:2394,3.81e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.43e-11!83;UBERON:0002329!2.43e-11!83;UBERON:0003077!2.43e-11!83;UBERON:0003059!2.43e-11!83;UBERON:0007282!2.43e-11!83;UBERON:0009618!2.43e-11!83;UBERON:0007285!2.43e-11!83;UBERON:0004290!4.39e-10!70;UBERON:0001134!1.22e-09!61;UBERON:0002036!1.22e-09!61;UBERON:0003082!1.22e-09!61;UBERON:0002385!2.08e-09!63;UBERON:0001015!2.08e-09!63;UBERON:0000383!2.08e-09!63;UBERON:0005256!3.77e-09!143;UBERON:0004872!7.46e-09!84;UBERON:0000486!8.72e-09!82;UBERON:0004923!1.25e-08!57;UBERON:0005631!2.30e-08!14;UBERON:0000158!2.30e-08!14;UBERON:0002199!4.78e-08!45;UBERON:0002416!4.78e-08!45;UBERON:0004573!6.78e-07!33;UBERON:0004571!6.78e-07!33;UBERON:0002384!8.93e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.06e-10;9!UBERON:0000042;3.06e-10;9!UBERON:0002384;2.05e-09;198!UBERON:0003688;4.59e-09;6!UBERON:0002358;4.59e-09;6!UBERON:0003684;4.59e-09;6!UBERON:0001178;4.59e-09;6!UBERON:0005631;1.32e-08;10!UBERON:0000158;1.32e-08;10!UBERON:0002385;3.31e-07;31!UBERON:0001015;3.31e-07;31!UBERON:0000383;3.31e-07;31!UBERON:0000478;6.60e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.15e-13,371;UBERON:0003688,4.41e-09,6;UBERON:0002358,4.41e-09,6;UBERON:0003684,4.41e-09,6;UBERON:0001178,4.41e-09,6;UBERON:0004923,1.08e-08,66;UBERON:0005631,2.02e-08,14;UBERON:0000158,2.02e-08,14;UBERON:0002199,3.74e-08,46;UBERON:0002416,3.74e-08,46;UBERON:0004457,3.67e-07,12;UBERON:0000042,3.67e-07,12;UBERON:0002097,5.54e-07,41;UBERON:0000478,6.81e-07,24 | |||
|phase1_expression=5.26867299884614,10.2768251467672,3.66481450649525,11.0080628188443,5.81049422755474,5.23403114460221,2.53299878168311,0.631719873426831,0.783556884599516,0,0,0.655324116390517,1.58260186937072,0.74259811776028,0.994192127183747,2.6893005858071,1.20538905604795,1.46062018077475,1.46379839637152,0,0.204000691244253,0,0,0.273748850145768,0,0.0764134057479513,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.255725123687061,10.4817354191524,8.02140657017423,8.40109809972778,2.3858578411533,4.37971383272372,1.79616152611729,2.66075276955077,1.93236528524877,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.357198913136319,0,0,0,0,0,0,0,0,11.9273268406876,5.06522046658319,5.16395805171553,26.1021324881421,4.25602058638028,2.24271040056923,2.1349799145941,2.96001058100592,0.311211035399766,1.21239604862719,0.163461903113459,0.454072282934794,5.18558332031999,0,0.936480230490962,0,1.19558944441441,0.23486899728753,0.323745888736263,0.421352420106746,0.61246251376468,0.122834317311768,0,2.37600571456411,5.43987244412825,0,0,0.168336113954066,0.625592599359821,0,1.31693286264251,2.45190236639216,1.50238058906597,0.567160915800105,13.2748330409758,5.33893472046419,6.35795703478686,10.2030972668697,2.57631323096097,15.973713482829,2.79175284497385,10.6329089311998,1.94874010322397,15.6508940031351,4.51044503347267,1.61646056818812,14.2003837006646,2.51880245569101,1.3564847384839,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,2.78620756819187,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.514703430895577,0,0,0.100528972411631,0,0,0,4.3299402607582,0.231860809950154,1.52631302506568,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.87192013766656,0.22001485746285,0.646358578788889,0,0.845302752556,1.06375246633948,1.04007436911366,0.257207374262142,0,0,2.14466990487221,7.05408087008876,0,0,4.6200953336531,1.58390374586686,0,0,0.799783929456456,0,0,0,3.83399768786532,0,0,4.92256442669769,2.4657158706046,1.07436577943937,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.858840442033979,1.00034104211935,0.271265023699736,2.9115920614313,5.35286966391485,2.83864347061082,2.81139395982512,0,0,0,3.32112799267718,0.368738337083406,1.04260337361699,0,1.37257369524342,0,0,0,0.909382714338778,4.99306318531491,1.5119514666484,8.18755765801964,8.74733247741956,17.1202657604175,6.53509661204075,5.11707249066703,12.3857519280578,2.96836132889982,1.69630663182921,3.9063579568888,1.39616165223476,2.59627214591811,2.44041794765914,0,0.802025881213139,0,1.03333003348146,1.82091168006717,1.83574180943194,0,0.15403067420883,0,1.46139224653261,0.316654886678627,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,19.2820715812991,0.773365746336976,0.154048617114644,1.38153307253517,0,1.6113036730241,1.16013355131383,1.02271952899321,1.24644849905432,0,0,0.127612712494584,0,0.929691098594572,17.9443037693465,0,3.08033580176089,0,1.73986598415015,0.55597265731176,0.286249773483982,0,0.632758849437452,2.09693213316207,0.255897791311334,3.42351190427136,0.636406495851874,0,0.719489830333259,2.74537029736055,1.41374882814824,0.202182481573316,1.58510321173008,0.421258456238981,0,1.21856744815642,2.11300293513511,0.818999468447914,2.68670320712054,0,1.65409603063837,0.66343897524122,0.438450885253763,0,0.655894752046633,0,0,1.40847801266121,0.860468113224309,1.57198465620994,0,0,9.49984358839489,18.1112191127946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,4.7748896947538,1.48482340416319,5.22173193568695,0,0.140669416410513,0.333926115068718,0.329607748453519,0,0.996239941255349,0,0,0.306806047506464,0,8.70910845453061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0.615602068030377,2.05095700524602,0,0,0.108647371922008,5.74202087517455,1.55715908783166,16.5240780565777,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.277349346026277,0,0,0,1.04836000945218,0,0,0,0,0.290967049465258,0,0.677942222341597,0.137041924646751,0,0,0,0,0.213452994739353,0.39961921916426,0,0,0,0,0.124252535565433,0.235694034616795,0.951329442515298,1.46443984837266,0.305994652908965,0,0,0,0,0.859530882839914,0,1.11712960508902,0.458320848023367,0,0,0.429226048136571,0,0.268733889946905,2.88239906833923,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0.25426853765475,1.62899880526114,1.72844298240254,1.959524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| ||
|short_description=p@chr15:48703363..48703377,- | |||
}} | }} |
Latest revision as of 02:09, 25 July 2015
Short description: | p@chr15:48703363..48703377, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:48703363..48703377, - |
Coexpression cluster: | C834_Fibroblast_Sertoli_chorionic_Smooth_Synoviocyte_Preadipocyte_normal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.54e-25 | 76 |
multi fate stem cell | 8.90e-19 | 427 |
somatic stem cell | 5.06e-18 | 433 |
stem cell | 4.73e-17 | 441 |
preadipocyte | 1.33e-14 | 12 |
connective tissue cell | 8.43e-13 | 361 |
mesenchymal cell | 1.08e-12 | 354 |
skin fibroblast | 1.73e-11 | 23 |
motile cell | 4.28e-10 | 386 |
extraembryonic cell | 1.17e-09 | 19 |
stromal cell | 3.19e-08 | 28 |
GAG secreting cell | 1.35e-07 | 9 |
carbohydrate secreting cell | 1.35e-07 | 9 |
muscle precursor cell | 8.01e-07 | 58 |
myoblast | 8.01e-07 | 58 |
multi-potent skeletal muscle stem cell | 8.01e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.15e-13 | 371 |
omentum | 4.41e-09 | 6 |
peritoneum | 4.41e-09 | 6 |
abdominal cavity | 4.41e-09 | 6 |
visceral peritoneum | 4.41e-09 | 6 |
organ component layer | 1.08e-08 | 66 |
extraembryonic membrane | 2.02e-08 | 14 |
membranous layer | 2.02e-08 | 14 |
integument | 3.74e-08 | 46 |
integumental system | 3.74e-08 | 46 |
cavity lining | 3.67e-07 | 12 |
serous membrane | 3.67e-07 | 12 |
skin of body | 5.54e-07 | 41 |
extraembryonic structure | 6.81e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.09e-07 | 5 |
myotonic disease | 1.09e-07 | 5 |
muscle tissue disease | 1.09e-07 | 5 |
myopathy | 1.09e-07 | 5 |
muscular disease | 1.09e-07 | 5 |
myotonic dystrophy | 1.09e-07 | 5 |
ovarian cancer | 3.81e-07 | 14 |