FFCP PHASE1:Hg19::chr15:49090180..49090194,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:49090180..49090194,- | |||
|description=CAGE_peak_at_chr15:49090180..49090194,- | |||
|id=chr15:49090180..49090194,- | |||
|ontology_enrichment_celltype=CL:0002334!2.03e-10!12;CL:1000306!9.17e-09!4;CL:0002547!9.17e-09!4;CL:0000569!9.75e-09!4;CL:0000011!9.75e-09!4;CL:0002582!1.76e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.93e-23;1!CL:0002625;2.93e-23;1!CL:0000228;2.93e-23;1!CL:0000216;2.93e-23;1!CL:0002372;2.93e-23;1!CL:0002582;1.17e-08;3!CL:0000136;9.84e-08;13!CL:0000083;6.49e-07;4!CL:0000056;8.37e-07;4!CL:0000737;8.37e-07;4!CL:1000306;8.37e-07;4!CL:0002547;8.37e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.67e-23,1;CL:0002625,1.67e-23,1;CL:0000216,1.67e-23,1;CL:0000228,2.62e-23,1;CL:0002372,2.62e-23,1;CL:0002582,1.51e-08,3;CL:0000083,6.50e-07,4;CL:0000136,7.41e-07,15;CL:0000737,8.14e-07,4;CL:0000515,8.14e-07,4;CL:1000306,9.63e-07,4;CL:0002547,9.63e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;8.37e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;1.48e-12;2!DOID:1793;6.49e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.48e-12,2;DOID:1793,6.50e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000415!9.17e-09!4;UBERON:0007240!9.17e-09!4;UBERON:0005742!9.17e-09!4;UBERON:0005734!9.17e-09!4;UBERON:0004664!9.17e-09!4;UBERON:0004663!9.17e-09!4;UBERON:0004458!3.19e-07!49;UBERON:0000991!6.89e-07!21;UBERON:0009196!6.89e-07!21;UBERON:0009117!6.89e-07!21;UBERON:0005564!6.89e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.93e-23;1!UBERON:0001343;2.93e-23;1!UBERON:0004910;2.93e-23;1!UBERON:0004813;2.93e-23;1!UBERON:0004909;2.45e-12;2!UBERON:0005904;8.37e-07;4!UBERON:0004797;8.37e-07;4!UBERON:0000415;8.37e-07;4!UBERON:0007240;8.37e-07;4!UBERON:0005742;8.37e-07;4!UBERON:0005734;8.37e-07;4!UBERON:0004664;8.37e-07;4!UBERON:0004663;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.67e-23,1;UBERON:0001343,1.67e-23,1;UBERON:0004910,1.67e-23,1;UBERON:0005154,1.67e-23,1;UBERON:0005295,1.67e-23,1;UBERON:0004813,1.67e-23,1;UBERON:0005297,1.67e-23,1;UBERON:0005294,1.67e-23,1;UBERON:0010141,1.67e-23,1;UBERON:0005891,1.67e-23,1;UBERON:0004909,1.85e-12,2;UBERON:0005904,7.27e-07,4;UBERON:0000415,9.63e-07,4;UBERON:0007240,9.63e-07,4;UBERON:0005742,9.63e-07,4;UBERON:0005734,9.63e-07,4;UBERON:0004664,9.63e-07,4;UBERON:0004663,9.63e-07,4 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.05927344650575,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,1.18800285728205,0.494533858557114,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.434343920002738,0,0.895304816199478,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992431231275107,0.153461973288062,0,0.384417447767103,0,0,0,0.154209693802656,0.710246901252508,0.739144404124282,1.03850885836724,0.232420756919918,0,0,0,0,0.546273504020151,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0.330991955875499,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0.0821154570532092,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.656740165994712,0.511164065356265,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.5013797880454,1.83807346058077,1.31149052283922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0.466311601748341,0.591420599958536,0.318593534327405,0,0.465788870628778,0,0,0,0,0,0.406870733204662,0.727394636810238,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.313972371402056,0,0,0,0,1.43325506366115,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0.462175628631418,0,0,0,0,0,0,0,0,0.378893491091197,0.803892390468535,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,2.15580485055809,0,0,0,0,0,0 | |||
|short_description=p@chr15:49090180..49090194,- | |||
}} |
Latest revision as of 02:10, 25 July 2015
Short description: | p@chr15:49090180..49090194, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:49090180..49090194, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.67e-23 | 1 |
seminiferous tubule epithelial cell | 1.67e-23 | 1 |
Sertoli cell | 1.67e-23 | 1 |
multinucleate cell | 2.62e-23 | 1 |
myotube | 2.62e-23 | 1 |
visceral preadipocyte | 1.51e-08 | 3 |
epithelial cell of pancreas | 6.50e-07 | 4 |
fat cell | 7.41e-07 | 15 |
striated muscle cell | 8.14e-07 | 4 |
skeletal muscle myoblast | 8.14e-07 | 4 |
fibroblast of tunica adventitia of artery | 9.63e-07 | 4 |
fibroblast of the aortic adventitia | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.67e-23 | 1 |
seminiferous tubule of testis | 1.67e-23 | 1 |
epithelium of male gonad | 1.67e-23 | 1 |
epithelial cord | 1.67e-23 | 1 |
sex cord | 1.67e-23 | 1 |
seminiferous tubule epithelium | 1.67e-23 | 1 |
testis sex cord | 1.67e-23 | 1 |
genital ridge | 1.67e-23 | 1 |
primitive sex cord of indifferent gonad | 1.67e-23 | 1 |
coelomic epithelium | 1.67e-23 | 1 |
epithelium of gonad | 1.85e-12 | 2 |
duct of male reproductive system | 7.27e-07 | 4 |
artery wall | 9.63e-07 | 4 |
tunica adventitia of artery | 9.63e-07 | 4 |
adventitia | 9.63e-07 | 4 |
tunica adventitia of blood vessel | 9.63e-07 | 4 |
aorta tunica adventitia | 9.63e-07 | 4 |
aorta wall | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.48e-12 | 2 |
pancreatic cancer | 6.50e-07 | 4 |