FFCP PHASE1:Hg19::chr15:56365882..56365895,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:56365882..56365895,+ | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_at_chr15:56365882..56365895,+ | |description=CAGE_peak_at_chr15:56365882..56365895,+ | ||
|id=chr15:56365882..56365895,+ | |id=chr15:56365882..56365895,+ | ||
|ontology_enrichment_celltype=CL:0002322!8.69e-14!5 | |ontology_enrichment_celltype=CL:0002322!8.69e-14!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;9.86e-31;5!CL:0000159;3.70e-13;2!CL:0002321;3.96e-10;15!CL:0002621;7.29e-09;3!CL:0000313;1.42e-07;1!CL:0002581;2.91e-07;1!CL:0000319;2.91e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.30e-31,5;CL:0000159,5.20e-13,2;CL:0002621,7.60e-09,3;CL:0000313,1.51e-07,1;CL:0002581,3.01e-07,1;CL:0000319,3.84e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!7.81e-10!25;DOID:120!1.08e-08!27;DOID:4362!4.44e-08!5;DOID:193!6.28e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:5093;3.60e-14;4!DOID:1612;3.60e-14;4!DOID:299;4.64e-11;25!DOID:3151;1.03e-07;1!DOID:3149;1.03e-07;1!DOID:2152;1.42e-07;1!DOID:178;2.91e-07;1!DOID:326;2.91e-07;1!DOID:3978;2.91e-07;1!DOID:3394;2.91e-07;1!DOID:3030;2.91e-07;1!DOID:5844;2.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.61e-14,4;DOID:1612,3.61e-14,4;DOID:299,4.43e-11,25;DOID:3151,1.18e-07,1;DOID:3149,1.18e-07,1;DOID:2152,1.51e-07,1;DOID:3030,3.84e-07,1;DOID:178,4.09e-07,1;DOID:326,4.09e-07,1;DOID:3978,4.09e-07,1;DOID:3394,4.09e-07,1;DOID:5844,4.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005795!4.98e-18!22;UBERON:0003975!6.71e-18!22;UBERON:0000995!3.86e-16!21;UBERON:0003134!4.62e-16!37;UBERON:0000474!4.62e-16!37;UBERON:0003100!7.66e-16!41;UBERON:0004175!2.51e-15!25;UBERON:0003133!2.53e-11!48;UBERON:0000002!6.52e-10!6;UBERON:0001560!6.52e-10!6;UBERON:0005156!2.12e-08!59;UBERON:0000990!2.12e-08!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;7.29e-09;3!UBERON:0003929;2.61e-08;7!UBERON:0004911;1.42e-07;1!UBERON:0003350;2.51e-07;8!UBERON:0005795;2.91e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,7.60e-09,3;UBERON:0004911,1.51e-07,1;UBERON:0003350,2.57e-07,8 | |||
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| ||
|short_description=p@chr15:56365882..56365895,+ | |short_description=p@chr15:56365882..56365895,+ | ||
}} | }} |
Latest revision as of 02:43, 25 July 2015
Short description: | p@chr15:56365882..56365895, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:56365882..56365895, + |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.30e-31 | 5 |
seromucus secreting cell | 5.20e-13 | 2 |
gingival epithelial cell | 7.60e-09 | 3 |
serous secreting cell | 1.51e-07 | 1 |
perirenal preadipocyte | 3.01e-07 | 1 |
mucus secreting cell | 3.84e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 7.60e-09 | 3 |
epithelium of female gonad | 1.51e-07 | 1 |
epithelium of mucosa | 2.57e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.61e-14 | 4 |
breast cancer | 3.61e-14 | 4 |
adenocarcinoma | 4.43e-11 | 25 |
skin squamous cell carcinoma | 1.18e-07 | 1 |
keratoacanthoma | 1.18e-07 | 1 |
ovary epithelial cancer | 1.51e-07 | 1 |
mucinous adenocarcinoma | 3.84e-07 | 1 |
vascular disease | 4.09e-07 | 1 |
ischemia | 4.09e-07 | 1 |
extrinsic cardiomyopathy | 4.09e-07 | 1 |
myocardial ischemia | 4.09e-07 | 1 |
myocardial infarction | 4.09e-07 | 1 |