FFCP PHASE1:Hg19::chr15:61133476..61133530,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:61133476..61133530,- | |||
|coexpression_cluster_id=C1370 | |coexpression_cluster_id=C1370 | ||
|description=CAGE_peak_at_chr15:61133476..61133530,- | |description=CAGE_peak_at_chr15:61133476..61133530,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000791!4.95e-29!18;CL:0000789!4.95e-29!18;CL:0002420!4.95e-29!18;CL:0002419!4.95e-29!18;CL:0000790!4.95e-29!18;CL:0000084!3.50e-24!25;CL:0000827!3.50e-24!25;CL:0000625!1.28e-20!11;CL:0000838!4.12e-16!52;CL:0000542!1.17e-15!53;CL:0000051!1.17e-15!53;CL:0000624!4.41e-12!6;CL:0000738!1.33e-11!140;CL:0002087!2.77e-08!119;CL:0000094!1.29e-07!8;CL:0000037!2.12e-07!172;CL:0000566!2.12e-07!172 | |ontology_enrichment_celltype=CL:0000791!4.95e-29!18;CL:0000789!4.95e-29!18;CL:0002420!4.95e-29!18;CL:0002419!4.95e-29!18;CL:0000790!4.95e-29!18;CL:0000084!3.50e-24!25;CL:0000827!3.50e-24!25;CL:0000625!1.28e-20!11;CL:0000838!4.12e-16!52;CL:0000542!1.17e-15!53;CL:0000051!1.17e-15!53;CL:0000624!4.41e-12!6;CL:0000738!1.33e-11!140;CL:0002087!2.77e-08!119;CL:0000094!1.29e-07!8;CL:0000037!2.12e-07!172;CL:0000566!2.12e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.50e-51;18!CL:0000789;1.50e-51;18!CL:0002419;1.50e-51;18!CL:0000084;2.68e-40;25!CL:0000625;6.04e-36;11!CL:0000624;1.92e-20;6!CL:0000542;3.33e-12;53!CL:0000623;7.47e-11;3!CL:0000898;1.18e-10;3!CL:0000226;1.89e-10;3!CL:0000842;1.89e-10;3!CL:0000094;2.01e-09;8!CL:0000815;2.42e-07;2!CL:0000792;2.42e-07;2!CL:0002677;2.42e-07;2!CL:0000081;9.09e-07;11 | |ontology_enrichment_celltype_v019=CL:0000791;1.50e-51;18!CL:0000789;1.50e-51;18!CL:0002419;1.50e-51;18!CL:0000084;2.68e-40;25!CL:0000625;6.04e-36;11!CL:0000624;1.92e-20;6!CL:0000542;3.33e-12;53!CL:0000623;7.47e-11;3!CL:0000898;1.18e-10;3!CL:0000226;1.89e-10;3!CL:0000842;1.89e-10;3!CL:0000094;2.01e-09;8!CL:0000815;2.42e-07;2!CL:0000792;2.42e-07;2!CL:0002677;2.42e-07;2!CL:0000081;9.09e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.42e-51,18;CL:0000789,1.42e-51,18;CL:0002420,1.42e-51,18;CL:0002419,1.42e-51,18;CL:0000790,1.42e-51,18;CL:0000084,2.45e-40,25;CL:0000827,2.45e-40,25;CL:0000625,6.37e-36,11;CL:0000838,1.19e-23,52;CL:0000542,4.26e-23,53;CL:0000051,4.26e-23,53;CL:0000624,1.71e-20,6;CL:0000738,1.20e-17,136;CL:0002087,3.25e-15,115;CL:0000037,9.95e-13,168;CL:0000988,1.13e-11,177;CL:0000623,8.25e-11,3;CL:0000825,8.25e-11,3;CL:0002031,8.95e-11,120;CL:0000898,1.07e-10,3;CL:0002032,1.43e-10,161;CL:0000837,1.43e-10,161;CL:0000226,1.86e-10,3;CL:0000842,1.86e-10,3;CL:0000094,2.11e-09,8;CL:0000815,2.16e-07,2;CL:0000792,2.16e-07,2;CL:0002677,2.16e-07,2;CL:0000081,9.40e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.50e-51;18!CL:0000051;3.33e-12;53 | |ontology_enrichment_development_v019=CL:0000790;1.50e-51;18!CL:0000051;3.33e-12;53 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.44e-21!115;UBERON:0000178!9.07e-16!15;UBERON:0000179!9.07e-16!15;UBERON:0000463!9.07e-16!15 | |ontology_enrichment_uberon=UBERON:0007023!4.44e-21!115;UBERON:0000178!9.07e-16!15;UBERON:0000179!9.07e-16!15;UBERON:0000463!9.07e-16!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.63e-28;15!UBERON:0000179;4.63e-28;15!UBERON:0000463;4.63e-28;15!UBERON:0002390;4.55e-13;32!UBERON:0002193;2.46e-08;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.63e-28;15!UBERON:0000179;4.63e-28;15!UBERON:0000463;4.63e-28;15!UBERON:0002390;4.55e-13;32!UBERON:0002193;2.46e-08;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.94e-28,15;UBERON:0000179,3.94e-28,15;UBERON:0000463,3.94e-28,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,10.747223146722,0.619264493264304,0,0,0,0,0,0,1.10799081706375,3.00816671205213,1.30206522429511,0,1.6194683300949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,3.92355994087075,0,16.7203304596758,18.0784950864616,21.382555895949,0,2.60737813306872,1.89379122293893,1.94826728407911,0.111410456885174,5.89211814949674,4.87374568083967,4.60366568400527,0,0,2.79544437826249,1.93445012450094,4.05724320029073,9.49034004237187,5.88589821797369,3.1360657141493,2.37949619664889,21.0771271481057,17.8686271650968,23.2778116657943,6.05274287215784,6.51083453856419,9.50452044448374,11.4437090499107,12.9266477265963,9.99445812418767,9.23431282971666,8.21127996921047,8.0642697289893,17.1161725301445,5.79297615531196,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10795356625974,10.1344960183973,5.26206448746968,0,0,0,0,0,0,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.2707210449155,2.5885704098234,5.44310544797566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,4.56702848308952,2.29391162142713,1.70894156152249,5.24109906007136,7.81588318863769,1.94541993357815,6.48037724685738,3.17250070517708,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,6.59215496907038,0,0,1.38141957765574,0,0,0,0,0,0,0,0.0986434056369336,4.7896618469388,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.687481272035051,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0,0.320362237703084,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,4.77398933079059,0.300841313397029,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0.308696632431779,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.563903507879121,0.0644578879735772,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.968833647540092,1.11734485732544,0,0,0,0.435433495793923,0,2.42467390852515,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,10.747223146722,0.619264493264304,0,0,0,0,0,0,1.10799081706375,3.00816671205213,1.30206522429511,0,1.6194683300949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,3.92355994087075,0,16.7203304596758,18.0784950864616,21.382555895949,0,2.60737813306872,1.89379122293893,1.94826728407911,0.111410456885174,5.89211814949674,4.87374568083967,4.60366568400527,0,0,2.79544437826249,1.93445012450094,4.05724320029073,9.49034004237187,5.88589821797369,3.1360657141493,2.37949619664889,21.0771271481057,17.8686271650968,23.2778116657943,6.05274287215784,6.51083453856419,9.50452044448374,11.4437090499107,12.9266477265963,9.99445812418767,9.23431282971666,8.21127996921047,8.0642697289893,17.1161725301445,5.79297615531196,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10795356625974,10.1344960183973,5.26206448746968,0,0,0,0,0,0,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.2707210449155,2.5885704098234,5.44310544797566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,4.56702848308952,2.29391162142713,1.70894156152249,5.24109906007136,7.81588318863769,1.94541993357815,6.48037724685738,3.17250070517708,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,6.59215496907038,0,0,1.38141957765574,0,0,0,0,0,0,0,0.0986434056369336,4.7896618469388,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.687481272035051,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0,0.320362237703084,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,4.77398933079059,0.300841313397029,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0.308696632431779,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.563903507879121,0.0644578879735772,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.968833647540092,1.11734485732544,0,0,0,0.435433495793923,0,2.42467390852515,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0 | ||
|short_description=p@chr15:61133476..61133530,- | |short_description=p@chr15:61133476..61133530,- | ||
}} | }} |
Latest revision as of 03:05, 25 July 2015
Short description: | p@chr15:61133476..61133530, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:61133476..61133530, - |
Coexpression cluster: | C1370_CD8_CD4_Natural_Peripheral_Whole_Basophils_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.42e-51 | 18 |
alpha-beta T cell | 1.42e-51 | 18 |
immature T cell | 1.42e-51 | 18 |
mature T cell | 1.42e-51 | 18 |
immature alpha-beta T cell | 1.42e-51 | 18 |
T cell | 2.45e-40 | 25 |
pro-T cell | 2.45e-40 | 25 |
CD8-positive, alpha-beta T cell | 6.37e-36 | 11 |
lymphoid lineage restricted progenitor cell | 1.19e-23 | 52 |
lymphocyte | 4.26e-23 | 53 |
common lymphoid progenitor | 4.26e-23 | 53 |
CD4-positive, alpha-beta T cell | 1.71e-20 | 6 |
leukocyte | 1.20e-17 | 136 |
nongranular leukocyte | 3.25e-15 | 115 |
hematopoietic stem cell | 9.95e-13 | 168 |
hematopoietic cell | 1.13e-11 | 177 |
natural killer cell | 8.25e-11 | 3 |
pro-NK cell | 8.25e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 8.95e-11 | 120 |
naive T cell | 1.07e-10 | 3 |
hematopoietic oligopotent progenitor cell | 1.43e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.43e-10 | 161 |
single nucleate cell | 1.86e-10 | 3 |
mononuclear cell | 1.86e-10 | 3 |
granulocyte | 2.11e-09 | 8 |
regulatory T cell | 2.16e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.16e-07 | 2 |
naive regulatory T cell | 2.16e-07 | 2 |
blood cell | 9.40e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 3.94e-28 | 15 |
haemolymphatic fluid | 3.94e-28 | 15 |
organism substance | 3.94e-28 | 15 |