FFCP PHASE1:Hg19::chr15:63354440..63354463,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:63354440..63354463,- | |||
|coexpression_cluster_id=C910 | |coexpression_cluster_id=C910 | ||
|description=CAGE_peak_at_chr15:63354440..63354463,- | |description=CAGE_peak_at_chr15:63354440..63354463,- | ||
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|ontology_enrichment_celltype=CL:0000055!2.00e-22!180;CL:0000359!7.65e-13!32;CL:0000680!7.09e-12!57;CL:0000056!7.09e-12!57;CL:0000355!7.09e-12!57;CL:0000192!9.26e-12!42;CL:0000514!9.26e-12!42;CL:0000057!2.86e-11!75;CL:0000183!3.62e-11!59;CL:0000187!3.83e-11!54;CL:0000393!9.38e-11!60;CL:0000211!9.38e-11!60;CL:0000222!8.04e-08!119 | |ontology_enrichment_celltype=CL:0000055!2.00e-22!180;CL:0000359!7.65e-13!32;CL:0000680!7.09e-12!57;CL:0000056!7.09e-12!57;CL:0000355!7.09e-12!57;CL:0000192!9.26e-12!42;CL:0000514!9.26e-12!42;CL:0000057!2.86e-11!75;CL:0000183!3.62e-11!59;CL:0000187!3.83e-11!54;CL:0000393!9.38e-11!60;CL:0000211!9.38e-11!60;CL:0000222!8.04e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.11e-14;32!CL:0000192;3.13e-10;43 | |ontology_enrichment_celltype_v019=CL:0000359;3.11e-14;32!CL:0000192;3.13e-10;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.51e-15,32;CL:0000192,1.64e-14,43;CL:0000514,1.64e-14,43;CL:0000680,1.95e-11,58;CL:0000056,1.95e-11,58;CL:0000355,1.95e-11,58;CL:0000187,1.83e-10,55;CL:0000393,9.94e-10,61;CL:0000211,9.94e-10,61;CL:0000057,1.21e-09,76 | |||
|ontology_enrichment_development_v019=CL:0000514;3.13e-10;43 | |ontology_enrichment_development_v019=CL:0000514;3.13e-10;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001135;1.34e-09;15!UBERON:0002385;2.41e-08;31!UBERON:0001015;2.41e-08;31!UBERON:0000383;2.41e-08;31!UBERON:0007100;6.26e-08;25 | |ontology_enrichment_uberon_v019=UBERON:0001135;1.34e-09;15!UBERON:0002385;2.41e-08;31!UBERON:0001015;2.41e-08;31!UBERON:0000383;2.41e-08;31!UBERON:0007100;6.26e-08;25 | ||
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| ||
|short_description=p@chr15:63354440..63354463,- | |short_description=p@chr15:63354440..63354463,- | ||
}} | }} |
Latest revision as of 03:12, 25 July 2015
Short description: | p@chr15:63354440..63354463, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:63354440..63354463, - |
Coexpression cluster: | C910_hepatic_smooth_Ewing_Adipocyte_left_Olfactory_umbilical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.51e-15 | 32 |
smooth muscle cell | 1.64e-14 | 43 |
smooth muscle myoblast | 1.64e-14 | 43 |
muscle precursor cell | 1.95e-11 | 58 |
myoblast | 1.95e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.95e-11 | 58 |
muscle cell | 1.83e-10 | 55 |
electrically responsive cell | 9.94e-10 | 61 |
electrically active cell | 9.94e-10 | 61 |
fibroblast | 1.21e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 2.24e-14 | 64 |
musculature | 2.24e-14 | 64 |
musculature of body | 2.24e-14 | 64 |
skeletal muscle tissue | 4.50e-13 | 62 |
striated muscle tissue | 4.50e-13 | 62 |
myotome | 4.50e-13 | 62 |
dense mesenchyme tissue | 2.17e-12 | 73 |
somite | 3.60e-12 | 71 |
presomitic mesoderm | 3.60e-12 | 71 |
presumptive segmental plate | 3.60e-12 | 71 |
dermomyotome | 3.60e-12 | 71 |
trunk paraxial mesoderm | 3.60e-12 | 71 |
epithelial vesicle | 7.06e-12 | 78 |
paraxial mesoderm | 8.14e-12 | 72 |
presumptive paraxial mesoderm | 8.14e-12 | 72 |
multilaminar epithelium | 5.94e-10 | 83 |
mesenchyme | 9.98e-10 | 160 |
entire embryonic mesenchyme | 9.98e-10 | 160 |
smooth muscle tissue | 1.49e-09 | 15 |
trunk mesenchyme | 1.72e-09 | 122 |
artery | 1.33e-08 | 42 |
arterial blood vessel | 1.33e-08 | 42 |
arterial system | 1.33e-08 | 42 |
trunk | 4.71e-08 | 199 |
primary circulatory organ | 5.07e-08 | 27 |
splanchnic layer of lateral plate mesoderm | 8.31e-08 | 83 |
circulatory system | 2.14e-07 | 112 |
systemic artery | 2.33e-07 | 33 |
systemic arterial system | 2.33e-07 | 33 |
vasculature | 5.91e-07 | 78 |
vascular system | 5.91e-07 | 78 |