FFCP PHASE1:Hg19::chr15:85360580..85360595,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:85360580..85360595,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr15:85360580..85360595,+ | |description=CAGE_peak_at_chr15:85360580..85360595,+ | ||
|id=chr15:85360580..85360595,+ | |id=chr15:85360580..85360595,+ | ||
|ontology_enrichment_celltype=CL:0000115!1.43e-18!35;CL:0002139!3.61e-17!24;CL:0002078!2.38e-16!44;CL:1000449!2.43e-12!16;CL:0000071!1.25e-11!18;CL:0002546!1.25e-11!18;CL:1000497!2.38e-10!18;CL:0002518!2.38e-10!18;CL:0002681!4.07e-10!13;CL:0002584!4.07e-10!13;CL:1000507!6.31e-09!12;CL:1000494!6.31e-09!12;CL:0000213!2.14e-07!57;CL:0000215!2.14e-07!57;CL:0005020!2.40e-07!6;CL:0002138!2.40e-07!6;CL:0005022!2.40e-07!6;CL:1000612!2.71e-07!7;CL:1000746!2.71e-07!7;CL:0000222!3.57e-07!119 | |ontology_enrichment_celltype=CL:0000115!1.43e-18!35;CL:0002139!3.61e-17!24;CL:0002078!2.38e-16!44;CL:1000449!2.43e-12!16;CL:0000071!1.25e-11!18;CL:0002546!1.25e-11!18;CL:1000497!2.38e-10!18;CL:0002518!2.38e-10!18;CL:0002681!4.07e-10!13;CL:0002584!4.07e-10!13;CL:1000507!6.31e-09!12;CL:1000494!6.31e-09!12;CL:0000213!2.14e-07!57;CL:0000215!2.14e-07!57;CL:0005020!2.40e-07!6;CL:0002138!2.40e-07!6;CL:0005022!2.40e-07!6;CL:1000612!2.71e-07!7;CL:1000746!2.71e-07!7;CL:0000222!3.57e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.12e-24;24!CL:0000115;4.17e-23;36!CL:1000449;2.96e-20;15!CL:1000497;2.43e-17;17!CL:0002518;2.43e-17;17!CL:0002681;8.05e-17;12!CL:0002584;8.05e-17;12!CL:0002078;3.56e-16;45!CL:0000071;4.28e-16;18!CL:1000507;1.73e-13;10!CL:1000494;1.73e-13;10!CL:0002138;1.26e-10;6!CL:1000746;1.58e-10;7!CL:1000612;1.58e-10;7!CL:0000213;3.74e-09;58!CL:0000215;3.74e-09;58!CL:0002543;5.85e-09;6!CL:0002188;2.01e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.50e-28,36;CL:0002078,5.07e-26,45;CL:0002139,1.00e-24,24;CL:1000449,2.63e-20,15;CL:1000497,2.19e-17,17;CL:0002518,2.19e-17,17;CL:0002681,7.98e-17,12;CL:0002584,7.98e-17,12;CL:0000071,3.80e-16,18;CL:0002546,3.80e-16,18;CL:0000213,6.46e-14,58;CL:0000215,6.46e-14,58;CL:1000507,1.60e-13,10;CL:1000494,1.60e-13,10;CL:0005020,1.29e-10,6;CL:0002138,1.29e-10,6;CL:0005022,1.29e-10,6;CL:1000746,1.56e-10,7;CL:1000612,1.56e-10,7;CL:0000222,1.89e-10,121;CL:0002543,5.80e-09,6;CL:0002188,1.93e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002546;4.28e-16;18!CL:0005022;1.26e-10;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.08e-26!115;UBERON:0000025!1.46e-24!194;UBERON:0004111!6.41e-23!241;UBERON:0000477!3.51e-20!286;UBERON:0000483!7.92e-20!309;UBERON:0000119!3.10e-19!312;UBERON:0003914!3.19e-15!118;UBERON:0003103!4.69e-15!69;UBERON:0000481!5.57e-13!347;UBERON:0006555!5.87e-13!17;UBERON:0005103!5.87e-13!17;UBERON:0000083!5.87e-13!17;UBERON:0009201!5.87e-13!17;UBERON:0004819!5.87e-13!17;UBERON:0006553!5.87e-13!17;UBERON:0003074!5.87e-13!17;UBERON:0003060!5.87e-13!17;UBERON:0004211!2.43e-12!16;UBERON:0001285!2.43e-12!16;UBERON:0007684!2.43e-12!16;UBERON:0003220!2.43e-12!16;UBERON:0004208!2.43e-12!16;UBERON:0000080!6.68e-12!18;UBERON:0002120!6.68e-12!18;UBERON:0004875!6.68e-12!18;UBERON:0005721!6.68e-12!18;UBERON:0005754!6.68e-12!18;UBERON:0007297!6.68e-12!18;UBERON:0004876!8.00e-12!20;UBERON:0003887!1.07e-11!21;UBERON:0003075!1.08e-11!86;UBERON:0007284!1.08e-11!86;UBERON:0001986!1.25e-11!18;UBERON:0004638!1.25e-11!18;UBERON:0004852!1.25e-11!18;UBERON:0001049!6.02e-11!57;UBERON:0005068!6.02e-11!57;UBERON:0006241!6.02e-11!57;UBERON:0007135!6.02e-11!57;UBERON:0002346!1.60e-10!90;UBERON:0001225!4.07e-10!13;UBERON:0008987!4.07e-10!13;UBERON:0000487!9.84e-10!22;UBERON:0000353!1.13e-09!17;UBERON:0000468!1.27e-09!659;UBERON:0005743!1.43e-09!86;UBERON:0000489!2.03e-09!32;UBERON:0000055!3.59e-09!69;UBERON:0009773!6.31e-09!12;UBERON:0001231!6.31e-09!12;UBERON:0004810!6.31e-09!12;UBERON:0002616!7.28e-09!59;UBERON:0002049!7.52e-09!79;UBERON:0007798!7.52e-09!79;UBERON:0001017!1.37e-08!82;UBERON:0000467!1.58e-08!625;UBERON:0001009!1.71e-08!113;UBERON:0000480!1.98e-08!626;UBERON:0002113!3.22e-08!27;UBERON:0003918!3.22e-08!27;UBERON:0005095!3.22e-08!27;UBERON:0007687!3.22e-08!27;UBERON:0003080!3.75e-08!42;UBERON:0000922!4.98e-08!612;UBERON:0000073!6.19e-08!94;UBERON:0001016!6.19e-08!94;UBERON:0004872!7.01e-08!84;UBERON:0006914!7.12e-08!25;UBERON:0003056!1.17e-07!61;UBERON:0002780!1.34e-07!41;UBERON:0001890!1.34e-07!41;UBERON:0006240!1.34e-07!41;UBERON:0005172!1.57e-07!55;UBERON:0005173!1.57e-07!55;UBERON:0001851!1.91e-07!16;UBERON:0000074!2.71e-07!7;UBERON:0001229!2.71e-07!7;UBERON:0001230!2.71e-07!7;UBERON:0005749!2.71e-07!7;UBERON:0004199!2.71e-07!7;UBERON:0004209!2.71e-07!7;UBERON:0004198!2.71e-07!7;UBERON:0004535!4.22e-07!110;UBERON:0000064!6.51e-07!219;UBERON:0001981!8.92e-07!60;UBERON:0007500!8.92e-07!60;UBERON:0004537!8.92e-07!60;UBERON:0006965!8.92e-07!60 | |||
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| ||
|short_description=p@chr15:85360580..85360595,+ | |short_description=p@chr15:85360580..85360595,+ | ||
}} | }} |
Latest revision as of 05:02, 25 July 2015
Short description: | p@chr15:85360580..85360595, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:85360580..85360595, + |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.50e-28 | 36 |
meso-epithelial cell | 5.07e-26 | 45 |
endothelial cell of vascular tree | 1.00e-24 | 24 |
epithelial cell of nephron | 2.63e-20 | 15 |
kidney cell | 2.19e-17 | 17 |
kidney epithelial cell | 2.19e-17 | 17 |
kidney cortical cell | 7.98e-17 | 12 |
renal cortical epithelial cell | 7.98e-17 | 12 |
blood vessel endothelial cell | 3.80e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.80e-16 | 18 |
lining cell | 6.46e-14 | 58 |
barrier cell | 6.46e-14 | 58 |
kidney tubule cell | 1.60e-13 | 10 |
nephron tubule epithelial cell | 1.60e-13 | 10 |
lymphangioblast | 1.29e-10 | 6 |
endothelial cell of lymphatic vessel | 1.29e-10 | 6 |
vascular lymphangioblast | 1.29e-10 | 6 |
glomerular cell | 1.56e-10 | 7 |
kidney corpuscule cell | 1.56e-10 | 7 |
mesodermal cell | 1.89e-10 | 121 |
vein endothelial cell | 5.80e-09 | 6 |
glomerular endothelial cell | 1.93e-08 | 5 |