FFCP PHASE1:Hg19::chr15:90344690..90344735,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:90344690..90344735,- to FFCP PHASE1:Hg19::chr15:90344690..90344735,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:90344690..90344735,- | |||
|coexpression_cluster_id=C403 | |||
|description=CAGE_peak_at_chr15:90344690..90344735,- | |||
|id=chr15:90344690..90344735,- | |||
|ontology_enrichment_celltype=CL:0000048!4.66e-22!430;CL:0000723!3.20e-21!436;CL:0000034!1.17e-19!444;CL:0002371!1.89e-16!591;CL:0000055!3.02e-16!180;CL:0002320!9.54e-15!365;CL:0000057!1.96e-14!75;CL:0000134!1.67e-12!358;CL:0000144!3.91e-12!625;CL:0000680!1.82e-11!57;CL:0000056!1.82e-11!57;CL:0000355!1.82e-11!57;CL:0000183!2.37e-10!59;CL:0000187!7.80e-10!54;CL:0000219!1.39e-09!390;CL:0002620!4.11e-09!23;CL:0002057!6.74e-09!42;CL:0000192!5.13e-08!42;CL:0000514!5.13e-08!42;CL:0000548!1.08e-07!679;CL:0000004!1.08e-07!679;CL:0000255!1.08e-07!679;CL:0000393!1.16e-07!60;CL:0000211!1.16e-07!60;CL:0000860!1.19e-07!45;CL:0000766!1.67e-07!76;CL:0002334!1.71e-07!12;CL:0000222!1.85e-07!119;CL:0000012!2.33e-07!682;CL:0000359!3.67e-07!32;CL:0002194!6.14e-07!63;CL:0000576!6.14e-07!63;CL:0000040!6.14e-07!63;CL:0000559!6.14e-07!63;CL:0002009!8.11e-07!65;CL:0000557!8.24e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.95e-07;39!CL:0000234;3.95e-07;39!CL:0000860;3.96e-07;33!CL:0002057;3.96e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.79e-12,427;CL:0000723,5.57e-12,433;CL:0000034,2.40e-11,441;CL:0002320,2.37e-08,361;CL:0000057,2.83e-08,76;CL:0000680,1.28e-07,58;CL:0000056,1.28e-07,58;CL:0000355,1.28e-07,58;CL:0000134,4.78e-07,354;CL:0000473,7.23e-07,48;CL:0000234,7.23e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.36e-16!167;UBERON:0002384!7.37e-14!375;UBERON:0004290!1.80e-12!70;UBERON:0000914!1.03e-11!83;UBERON:0002329!1.03e-11!83;UBERON:0003077!1.03e-11!83;UBERON:0003059!1.03e-11!83;UBERON:0007282!1.03e-11!83;UBERON:0009618!1.03e-11!83;UBERON:0007285!1.03e-11!83;UBERON:0000926!1.79e-10!448;UBERON:0004120!1.79e-10!448;UBERON:0006603!1.79e-10!448;UBERON:0002385!4.92e-10!63;UBERON:0001015!4.92e-10!63;UBERON:0000383!4.92e-10!63;UBERON:0001637!5.31e-10!42;UBERON:0003509!5.31e-10!42;UBERON:0004572!5.31e-10!42;UBERON:0003081!6.90e-10!216;UBERON:0001134!8.15e-10!61;UBERON:0002036!8.15e-10!61;UBERON:0003082!8.15e-10!61;UBERON:0000486!1.52e-09!82;UBERON:0004573!7.49e-09!33;UBERON:0004571!7.49e-09!33;UBERON:0005256!2.91e-08!143;UBERON:0002049!2.96e-08!79;UBERON:0007798!2.96e-08!79;UBERON:0001981!3.91e-08!60;UBERON:0007500!3.91e-08!60;UBERON:0004537!3.91e-08!60;UBERON:0006965!3.91e-08!60;UBERON:0000055!5.24e-08!69;UBERON:0002199!5.47e-08!45;UBERON:0002416!5.47e-08!45;UBERON:0004535!1.15e-07!110;UBERON:0001009!4.85e-07!113;UBERON:0003914!5.20e-07!118;UBERON:0002371!7.54e-07!80;UBERON:0002405!7.54e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.07e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.87e-10,71;UBERON:0003059,1.87e-10,71;UBERON:0007282,1.87e-10,71;UBERON:0004290,1.87e-10,71;UBERON:0009618,1.87e-10,71;UBERON:0002204,2.98e-10,167;UBERON:0003077,3.29e-10,72;UBERON:0007285,3.29e-10,72;UBERON:0007524,5.68e-10,73;UBERON:0007503,6.96e-09,78;UBERON:0002384,4.59e-08,371;UBERON:0000486,6.11e-08,83;UBERON:0002199,1.18e-07,46;UBERON:0002416,1.18e-07,46;UBERON:0002385,2.28e-07,64;UBERON:0001015,2.28e-07,64;UBERON:0000383,2.28e-07,64;UBERON:0001013,2.57e-07,14;UBERON:0001134,8.40e-07,62;UBERON:0002036,8.40e-07,62;UBERON:0003082,8.40e-07,62;UBERON:0002067,8.82e-07,9;UBERON:0004016,8.82e-07,9;UBERON:0010083,8.82e-07,9 | |||
|phase1_expression=0.181678379270557,1.2846031433459,0.281908808191942,1.0007329835313,0.446961094427288,0,0,2.52687949370732,2.61185628199839,0,0,0,0.263766978228454,1.11389717664042,0.994192127183747,3.36162573225888,3.01347264011988,0,0.487932798790507,0.492484232307152,1.22400414746552,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,1.00272223735071,0,0.447830948479849,0,0.257575567634187,1.30858414901608,0.377875943688809,1.21292030593908,0.697287110717054,0.411167888021826,0.309706370895104,3.45230870786581,1.0246428261164,0.236482229888585,1.37898272294647,1.29096936716765,0,3.9530891303947,0.818718450173537,0.449446968890169,3.67300670845083,0.641858054152187,1.27867425159808,2.96866170168044,1.79517291859469,0.852449501065388,3.48251086354301,0,0,3.26623264833766,1.5644487552606,0.434377689410233,1.21079900526674,0.736555271975129,0.949387162322653,0,0,0,0.112328631146495,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0.361439152384566,0,0.434539556882471,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.654895377488563,0,0,0,0.174129737299267,2.52620124985844,0,0,0,0,0,0.694281003215189,0,1.25849830862972,0.275118041940067,0.626984899610432,0.258416759169329,0,0,0.805658634218294,0,0.24406205754817,1.10298924103761,0.81014194788176,0.357198913136319,0.44905874525234,0,0,0.949265659568129,0.366403487860815,0,0,0,0,0.759783069987479,0.264818361626438,3.72887606973458,0.354668382198357,0,0,0,0,0.404132016209064,0.653847612453835,0.756787138224657,0,0,1.5608003841516,0,3.28787097213962,1.76151747965647,1.13311061057692,0.421352420106746,0.61246251376468,0.368502951935304,1.44656093646072,0,0.247266929278557,3.64064544775211,5.03032699271367,0,0.625592599359821,0.277064115484183,0,0.612975591598039,0,0.113432183160021,1.25572744982203,0.213557388818567,0.635795703478686,3.00091096084402,1.23663035086127,1.8034837803194,1.11670113798954,1.18143432568886,0.584622030967192,0.757301322732344,0.460249493211497,0.484938170456436,1.06502877754984,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0,0,5.78916844373597,4.14404764057442,6.03678306441573,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,6.33775174109154,4.91413608338813,0.590789906681404,0,0,0.171567810298526,0.109750285408626,0,0,0,0,1.03993478527958,0,0,0,0,0.462985512576611,0,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0.205654985406647,0,0,0.224262168690721,0.43596006883328,0.4400297149257,0,14.3062578340753,3.381211010224,0.26593811658487,0,0,0,0.799266537048298,0.142977993658148,1.62786481617433,0,0.325736184293735,0,0,0,0,0,0,1.00451418286425,4.21667878966063,0,0,0,1.59259437334337,4.31500277355805,1.61154866915906,0,0,0,0,0,0,0,0,0,2.24702107184155,17.9496875522415,1.24324654030811,0.49076596687656,2.50085260529839,0.542530047399471,0.207970861530807,1.24900292158013,0.788512075169673,0.35142424497814,0.902838299183157,0,1.03473071292505,0,0.553107505625109,3.99664626553181,1.76221041716467,1.37257369524342,0.206768026122887,0,0,0,0,0.30239029332968,0.744323423456331,0.306923946576125,1.12264037773229,0.128139149255701,0.511707249066704,0.160853921143607,2.96836132889982,2.62156479464514,2.84098760501003,2.54594183642808,3.11552657510173,3.60252173225874,0,0.802025881213139,0,0,0.546273504020151,0.131124414959424,0,0,0,1.46139224653261,0.105551628892876,0,0.680374821106063,0,0,0,0,0.509752546090077,1.66215201785745,0.671624264166535,0,0,0,0,0,1.03041011647722,0,0,0.574265537996172,0,0,1.25671933779759,1.3864375540318,0.767518373630648,1.37836572484531,0.859361958946189,1.16013355131383,0.767039646744908,0,0,0,0,0,1.39453664789186,5.98143458978216,1.3940745403212,0.924100740528266,0,0.869932992075073,0.74129687641568,0,0,0.632758849437452,0,0.511795582622668,0,1.27281299170375,0,0,0.274537029736055,0.353437207037059,0.202182481573316,4.75530963519025,0.842516912477962,0,2.68084838594413,2.11300293513511,0.545999645631943,0.707027159768564,2.26016233240486,0.551365343546124,1.99031692572366,1.31535265576129,2.31510213706675,0,0.405820753925408,0,0.281695602532241,0.143411352204052,0,0,0.354761064070598,0.422215270595328,0.987884678879706,0,1.74967360122491,0,0,0,0.659006605437454,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0.199579371432817,0.766021480529467,0.423347165447766,0,1.12318871245384,0,0.626719583092093,0,0,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,1.99052386215701,5.66128412821371,0.611030144933625,0,0,0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| ||
|short_description=p@chr15:90344690..90344735,- | |||
}} | }} |
Latest revision as of 05:21, 25 July 2015
Short description: | p@chr15:90344690..90344735, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:90344690..90344735, - |
Coexpression cluster: | C403_small_Neutrophils_temporal_leiomyoma_Hair_colon_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.79e-12 | 427 |
somatic stem cell | 5.57e-12 | 433 |
stem cell | 2.40e-11 | 441 |
connective tissue cell | 2.37e-08 | 361 |
fibroblast | 2.83e-08 | 76 |
muscle precursor cell | 1.28e-07 | 58 |
myoblast | 1.28e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.28e-07 | 58 |
mesenchymal cell | 4.78e-07 | 354 |
defensive cell | 7.23e-07 | 48 |
phagocyte | 7.23e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
somite | 1.87e-10 | 71 |
presomitic mesoderm | 1.87e-10 | 71 |
presumptive segmental plate | 1.87e-10 | 71 |
dermomyotome | 1.87e-10 | 71 |
trunk paraxial mesoderm | 1.87e-10 | 71 |
musculoskeletal system | 2.98e-10 | 167 |
paraxial mesoderm | 3.29e-10 | 72 |
presumptive paraxial mesoderm | 3.29e-10 | 72 |
dense mesenchyme tissue | 5.68e-10 | 73 |
epithelial vesicle | 6.96e-09 | 78 |
connective tissue | 4.59e-08 | 371 |
multilaminar epithelium | 6.11e-08 | 83 |
integument | 1.18e-07 | 46 |
integumental system | 1.18e-07 | 46 |
muscle tissue | 2.28e-07 | 64 |
musculature | 2.28e-07 | 64 |
musculature of body | 2.28e-07 | 64 |
adipose tissue | 2.57e-07 | 14 |
skeletal muscle tissue | 8.40e-07 | 62 |
striated muscle tissue | 8.40e-07 | 62 |
myotome | 8.40e-07 | 62 |
dermis | 8.82e-07 | 9 |
dermatome | 8.82e-07 | 9 |
future dermis | 8.82e-07 | 9 |