FFCP PHASE1:Hg19::chr16:17563573..17563582,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:17563573..17563582,+ | |||
|coexpression_cluster_id=C96 | |coexpression_cluster_id=C96 | ||
|description=CAGE_peak_at_chr16:17563573..17563582,+ | |description=CAGE_peak_at_chr16:17563573..17563582,+ | ||
|id=chr16:17563573..17563582,+ | |id=chr16:17563573..17563582,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.66e-11!42;CL:0002009!5.95e-11!65;CL:0000860!1.36e-10!45;CL:0000557!8.68e-10!71;CL:0002194!1.14e-09!63;CL:0000576!1.14e-09!63;CL:0000040!1.14e-09!63;CL:0000559!1.14e-09!63;CL:0000763!2.66e-09!112;CL:0000049!2.66e-09!112;CL:0000766!5.98e-09!76;CL:0000839!1.89e-08!70;CL:0000037!5.41e-08!172;CL:0000566!5.41e-08!172;CL:0000840!1.55e-07!5;CL:0001029!1.55e-07!5;CL:0000784!2.44e-07!3;CL:0000988!2.69e-07!182;CL:0000451!4.80e-07!10 | |ontology_enrichment_celltype=CL:0002057!1.66e-11!42;CL:0002009!5.95e-11!65;CL:0000860!1.36e-10!45;CL:0000557!8.68e-10!71;CL:0002194!1.14e-09!63;CL:0000576!1.14e-09!63;CL:0000040!1.14e-09!63;CL:0000559!1.14e-09!63;CL:0000763!2.66e-09!112;CL:0000049!2.66e-09!112;CL:0000766!5.98e-09!76;CL:0000839!1.89e-08!70;CL:0000037!5.41e-08!172;CL:0000566!5.41e-08!172;CL:0000840!1.55e-07!5;CL:0001029!1.55e-07!5;CL:0000784!2.44e-07!3;CL:0000988!2.69e-07!182;CL:0000451!4.80e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000306;7.14e-26;4!CL:0002222;7.14e-26;4!CL:0002224;7.14e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,7.14e-26,4;CL:0002222,7.14e-26,4;CL:0002224,7.14e-26,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.07e-10!80;UBERON:0001474!7.15e-09!86;UBERON:0002390!4.63e-08!102;UBERON:0003061!4.63e-08!102;UBERON:0004765!4.19e-07!101;UBERON:0001434!4.19e-07!101;UBERON:0002193!4.74e-07!112;UBERON:0002405!8.78e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!9.07e-10!80;UBERON:0001474!7.15e-09!86;UBERON:0002390!4.63e-08!102;UBERON:0003061!4.63e-08!102;UBERON:0004765!4.19e-07!101;UBERON:0001434!4.19e-07!101;UBERON:0002193!4.74e-07!112;UBERON:0002405!8.78e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0010077;7.14e-26;4!UBERON:0005389;7.14e-26;4!UBERON:0000484;7.14e-26;4!UBERON:0000965;7.14e-26;4!UBERON:0001803;7.14e-26;4!UBERON:0007625;2.37e-10;11!UBERON:0001801;2.00e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,7.14e-26,4;UBERON:0005389,7.14e-26,4;UBERON:0000484,7.14e-26,4;UBERON:0002546,7.14e-26,4;UBERON:0000965,7.14e-26,4;UBERON:0001803,7.14e-26,4;UBERON:0003073,7.14e-26,4;UBERON:0005426,7.14e-26,4;UBERON:0000076,1.07e-13,8;UBERON:0007625,2.37e-10,11;UBERON:0001801,2.00e-08,14 | |||
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|short_description=p@chr16:17563573..17563582,+ | |short_description=p@chr16:17563573..17563582,+ | ||
}} | }} |
Latest revision as of 06:43, 25 July 2015
Short description: | p@chr16:17563573..17563582, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:17563573..17563582, + |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 7.14e-26 | 4 |
vertebrate lens cell | 7.14e-26 | 4 |
lens epithelial cell | 7.14e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 7.14e-26 | 4 |
transparent eye structure | 7.14e-26 | 4 |
simple cuboidal epithelium | 7.14e-26 | 4 |
cranial placode | 7.14e-26 | 4 |
lens of camera-type eye | 7.14e-26 | 4 |
epithelium of lens | 7.14e-26 | 4 |
lens placode | 7.14e-26 | 4 |
lens vesicle | 7.14e-26 | 4 |
external ectoderm | 1.07e-13 | 8 |
pigment epithelium of eye | 2.37e-10 | 11 |
anterior segment of eyeball | 2.00e-08 | 14 |