FFCP PHASE1:Hg19::chr16:29168624..29168639,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:29168624..29168639,+
|short_description=p@chr16:29168624..29168639,+
|description=CAGE_peak_at_chr16:29168624..29168639,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:29168624..29168639,+ | |||
|coexpression_cluster_id=C3313 | |||
|description=CAGE_peak_at_chr16:29168624..29168639,+ | |||
|id=chr16:29168624..29168639,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.31e-73!42;CL:0000860!6.59e-72!45;CL:0000766!6.52e-58!76;CL:0002194!1.69e-47!63;CL:0000576!1.69e-47!63;CL:0000040!1.69e-47!63;CL:0000559!1.69e-47!63;CL:0002009!9.52e-46!65;CL:0000839!8.30e-42!70;CL:0000557!4.38e-41!71;CL:0000763!1.28e-37!112;CL:0000049!1.28e-37!112;CL:0000738!1.55e-37!140;CL:0002087!1.74e-31!119;CL:0000037!3.82e-31!172;CL:0000566!3.82e-31!172;CL:0000988!1.04e-28!182;CL:0002032!2.00e-28!165;CL:0000837!2.00e-28!165;CL:0002031!1.67e-26!124;CL:0002393!1.62e-24!9;CL:0002397!1.62e-24!9;CL:0000094!1.74e-18!8;CL:0000081!4.29e-13!11;CL:0000134!7.96e-11!358;CL:0002320!2.29e-10!365;CL:0000775!3.12e-10!3;CL:0000767!5.79e-10!3;CL:0000048!1.27e-09!430;CL:0000034!1.62e-09!444;CL:0000723!2.69e-09!436;CL:0000875!6.75e-09!3;CL:0002396!6.75e-09!3;CL:0000219!9.34e-09!390 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.57e-61;8!CL:0000081;1.81e-44;11!CL:0000775;2.16e-31;3!CL:0000767;1.10e-30;3!CL:0000766;1.84e-15;69!CL:0002393;2.08e-15;6!CL:0002397;2.08e-15;6!CL:0000576;8.88e-11;48!CL:0000860;4.00e-10;33!CL:0002057;4.00e-10;33!CL:0000473;1.60e-08;39!CL:0000234;1.60e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.39e-61,8;CL:0000081,2.21e-44,11;CL:0000766,9.98e-33,72;CL:0000775,1.96e-31,3;CL:0000767,1.66e-30,3;CL:0000763,3.76e-21,108;CL:0000049,3.76e-21,108;CL:0000738,1.29e-18,136;CL:0000860,5.43e-18,42;CL:0002057,5.43e-18,42;CL:0000473,1.34e-15,48;CL:0000234,1.34e-15,48;CL:0000037,1.30e-14,168;CL:0000988,9.62e-14,177;CL:0002032,1.94e-13,161;CL:0000837,1.94e-13,161;CL:0002194,3.03e-12,59;CL:0000576,3.03e-12,59;CL:0000040,3.03e-12,59;CL:0000559,3.03e-12,59;CL:0002009,8.22e-12,61;CL:0000839,7.68e-11,66;CL:0000557,1.15e-10,67;CL:0002393,1.43e-10,9;CL:0002397,1.43e-10,9;CL:0002087,4.00e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.60e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.28e-44!102;UBERON:0003061!5.28e-44!102;UBERON:0002193!4.98e-39!112;UBERON:0002371!1.07e-37!80;UBERON:0001474!2.20e-34!86;UBERON:0004765!8.05e-28!101;UBERON:0001434!8.05e-28!101;UBERON:0002405!3.04e-23!115;UBERON:0003081!1.81e-16!216;UBERON:0002204!6.39e-15!167;UBERON:0000178!5.65e-11!15;UBERON:0000179!5.65e-11!15;UBERON:0000463!5.65e-11!15;UBERON:0002384!9.68e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.34e-12,98;UBERON:0003061,1.34e-12,98;UBERON:0002193,2.83e-11,108;UBERON:0002371,2.81e-09,76;UBERON:0001474,1.61e-08,82;UBERON:0004765,1.16e-07,90;UBERON:0002405,2.22e-07,93;UBERON:0001434,8.74e-07,100 | |||
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| ||
|short_description=p@chr16:29168624..29168639,+ | |||
}} | }} |
Latest revision as of 07:49, 25 July 2015
Short description: | p@chr16:29168624..29168639, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:29168624..29168639, + |
Coexpression cluster: | C3313_Eosinophils_Basophils_CD14_Neutrophils_Peripheral_Whole_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.39e-61 | 8 |
blood cell | 2.21e-44 | 11 |
myeloid leukocyte | 9.98e-33 | 72 |
neutrophil | 1.96e-31 | 3 |
basophil | 1.66e-30 | 3 |
myeloid cell | 3.76e-21 | 108 |
common myeloid progenitor | 3.76e-21 | 108 |
leukocyte | 1.29e-18 | 136 |
classical monocyte | 5.43e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.43e-18 | 42 |
defensive cell | 1.34e-15 | 48 |
phagocyte | 1.34e-15 | 48 |
hematopoietic stem cell | 1.30e-14 | 168 |
hematopoietic cell | 9.62e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.94e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.94e-13 | 161 |
monopoietic cell | 3.03e-12 | 59 |
monocyte | 3.03e-12 | 59 |
monoblast | 3.03e-12 | 59 |
promonocyte | 3.03e-12 | 59 |
macrophage dendritic cell progenitor | 8.22e-12 | 61 |
myeloid lineage restricted progenitor cell | 7.68e-11 | 66 |
granulocyte monocyte progenitor cell | 1.15e-10 | 67 |
intermediate monocyte | 1.43e-10 | 9 |
CD14-positive, CD16-positive monocyte | 1.43e-10 | 9 |
nongranular leukocyte | 4.00e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.34e-12 | 98 |
blood island | 1.34e-12 | 98 |
hemolymphoid system | 2.83e-11 | 108 |
bone marrow | 2.81e-09 | 76 |
bone element | 1.61e-08 | 82 |
skeletal element | 1.16e-07 | 90 |
immune system | 2.22e-07 | 93 |
skeletal system | 8.74e-07 | 100 |