FFCP PHASE1:Hg19::chr16:50914085..50914104,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:50914085..50914104,+ | |||
|description=CAGE_peak_at_chr16:50914085..50914104,+ | |description=CAGE_peak_at_chr16:50914085..50914104,+ | ||
|id=chr16:50914085..50914104,+ | |id=chr16:50914085..50914104,+ | ||
|ontology_enrichment_celltype=CL:0002322!7.54e-11!5;CL:0000066!7.35e-07!254 | |ontology_enrichment_celltype=CL:0002322!7.54e-11!5;CL:0000066!7.35e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000575;9.07e-10;2!CL:0000317;1.12e-09;2!CL:1000448;1.12e-09;2!CL:0002308;1.12e-09;2!CL:0002140;1.12e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,9.46e-10,2;CL:0000317,1.12e-09,2;CL:1000448,1.12e-09,2;CL:0002308,1.12e-09,2;CL:0002140,1.12e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.28e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;2.82e-17;4!DOID:1325;2.70e-10;7!DOID:3904;2.70e-10;7!DOID:3905;3.30e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.59e-17,4;DOID:1325,2.58e-10,7;DOID:3904,2.58e-10,7;DOID:3905,3.18e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0003296!2.35e-10!4;UBERON:0010133!2.35e-10!4;UBERON:0006554!4.03e-09!44;UBERON:0001008!7.88e-09!45;UBERON:0002113!7.12e-08!27;UBERON:0003918!7.12e-08!27;UBERON:0005095!7.12e-08!27;UBERON:0007687!7.12e-08!27;UBERON:0005172!1.06e-07!55;UBERON:0005173!1.06e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.17e-33;2!UBERON:0002757;1.17e-33;2!UBERON:0010134;1.17e-33;2!UBERON:0005408;1.17e-33;2!UBERON:0001899;1.17e-33;2!UBERON:0003296;2.19e-17;4!UBERON:0010133;2.19e-17;4!UBERON:0002784;2.19e-17;4!UBERON:0001894;2.35e-10;7!UBERON:0002419;1.12e-09;2!UBERON:0007771;1.12e-09;2!UBERON:0003297;1.12e-09;2!UBERON:0001821;1.12e-09;2!UBERON:0003487;1.12e-09;2!UBERON:0001820;1.12e-09;2!UBERON:0002368;9.63e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.39e-34,2;UBERON:0002757,8.39e-34,2;UBERON:0010134,8.39e-34,2;UBERON:0005408,8.39e-34,2;UBERON:0001899,8.39e-34,2;UBERON:0003296,1.86e-17,4;UBERON:0010133,1.86e-17,4;UBERON:0002784,1.86e-17,4;UBERON:0001894,2.14e-10,7;UBERON:0006222,2.14e-10,7;UBERON:0002419,1.12e-09,2;UBERON:0007771,1.12e-09,2;UBERON:0003297,1.12e-09,2;UBERON:0001821,1.12e-09,2;UBERON:0003487,1.12e-09,2;UBERON:0001820,1.12e-09,2;UBERON:0005089,1.12e-09,2;UBERON:0005088,1.12e-09,2;UBERON:0002368,6.32e-08,35;UBERON:0002530,4.31e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,4.00724817121796,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.243947412259191,0.265059536642971,0.348581828608555,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0.590789906681404,0,0.122988438543114,0,0.219500570817251,0,0,0.462942225792648,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.447792613514241,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0.902399225814824,1.00119938235739,0,0,0.73886140225013,0,0,0,0,0,0,0.764628819135115,0,0.447749509444357,0,0,0,0,0,0.206082023295445,0,0,3.44559322797703,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0.438770794307945,6.31843088410143,0,0.230850775511391,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0.520679215005393,0.0979923974143777,0,0.52418000472609,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0.782205530939212,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.275078873194468,0.415440338029185,0,0,0.0607495566580247,0,0.551639951094387,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39656701034247,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0.1251909307065,0,0,0.124192805882767,0,0.249960815924213,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,1.60710550763486,2.35398605553177,0.606965604236632,0.682986574053893,0.0887023701626388,0,0.342976018874837,0.135939465953663,0,0,0,0.235479278551542,0,0,0,0.215927591218621,0,0.428859265059938,3.16027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0.994753875806841,0,0.90356865631168,1.20934568419972,1.20770274853339,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0.801652215796681,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0,0.358611026963382,0,0,0,0,0,0,0.244482888365733,0,0,0,0 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| ||
|short_description=p@chr16:50914085..50914104,+ | |short_description=p@chr16:50914085..50914104,+ | ||
}} | }} |
Latest revision as of 09:40, 25 July 2015
Short description: | p@chr16:50914085..50914104, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50914085..50914104, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 9.46e-10 | 2 |
sebum secreting cell | 1.12e-09 | 2 |
epithelial cell of sweat gland | 1.12e-09 | 2 |
epithelial cell of skin gland | 1.12e-09 | 2 |
acinar cell of sebaceous gland | 1.12e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
pineal body | 8.39e-34 | 2 |
regional part of epithalamus | 8.39e-34 | 2 |
secretory circumventricular organ | 8.39e-34 | 2 |
circumventricular organ | 8.39e-34 | 2 |
epithalamus | 8.39e-34 | 2 |
gland of diencephalon | 1.86e-17 | 4 |
neuroendocrine gland | 1.86e-17 | 4 |
regional part of diencephalon | 1.86e-17 | 4 |
diencephalon | 2.14e-10 | 7 |
future diencephalon | 2.14e-10 | 7 |
skin gland | 1.12e-09 | 2 |
epidermis gland | 1.12e-09 | 2 |
gland of integumental system | 1.12e-09 | 2 |
sebaceous gland | 1.12e-09 | 2 |
skin sebaceous gland | 1.12e-09 | 2 |
sweat gland | 1.12e-09 | 2 |
sweat gland placode | 1.12e-09 | 2 |
sebaceous gland placode | 1.12e-09 | 2 |
endocrine gland | 6.32e-08 | 35 |
gland | 4.31e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.59e-17 | 4 |
bronchus cancer | 2.58e-10 | 7 |
bronchogenic carcinoma | 2.58e-10 | 7 |
lung carcinoma | 3.18e-08 | 9 |