FFCP PHASE1:Hg19::chr16:68679512..68679523,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:68679512..68679523,+ | |||
|description=CAGE_peak_at_chr16:68679512..68679523,+ | |||
|id=chr16:68679512..68679523,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.52e-28!254;CL:0002077!1.65e-14!33;CL:0002076!7.66e-14!43;CL:0002251!4.07e-12!21;CL:0000223!6.67e-11!59;CL:0000150!7.90e-11!9;CL:0000076!1.16e-09!62;CL:0002159!3.61e-09!13;CL:0000148!6.37e-08!10;CL:0000541!6.37e-08!10;CL:0002621!9.94e-08!3;CL:0000622!1.37e-07!5;CL:0000075!1.90e-07!27;CL:0000220!2.90e-07!246;CL:0000710!3.07e-07!20;CL:0002321!4.09e-07!248;CL:0000221!4.32e-07!71;CL:0000039!8.20e-07!7;CL:0000586!8.20e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000148;4.67e-45;10!CL:0000147;2.80e-32;14!CL:0002567;3.17e-25;3!CL:0002621;6.20e-25;3!CL:0000710;1.13e-22;20!CL:0002566;2.47e-19;1!CL:0002077;7.83e-18;34!CL:0000075;7.63e-17;27!CL:0000317;2.37e-10;2!CL:1000448;2.37e-10;2!CL:0002308;2.37e-10;2!CL:0002140;2.37e-10;2!CL:0002251;9.60e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.62e-45,10;CL:0000541,5.62e-45,10;CL:0000147,3.20e-32,14;CL:0002567,2.64e-25,3;CL:0002621,2.64e-25,3;CL:0000710,1.24e-22,20;CL:0002566,2.25e-19,1;CL:0002077,6.15e-19,34;CL:0000075,8.17e-17,27;CL:0000333,1.34e-10,41;CL:0000317,2.99e-10,2;CL:1000448,2.99e-10,2;CL:0002308,2.99e-10,2;CL:0002140,2.99e-10,2;CL:0002251,7.26e-09,20;CL:0000221,1.24e-08,72;CL:0000133,1.76e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.87e-12!14;DOID:305!5.41e-10!106;DOID:0050687!9.04e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.47e-19;1!DOID:3149;2.47e-19;1!DOID:3451;2.37e-10;2!DOID:4159;2.37e-10;2!DOID:0060122;2.37e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.62e-19,1;DOID:3149,5.62e-19,1;DOID:3451,3.58e-10,2;DOID:4159,3.58e-10,2;DOID:0060122,3.58e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.10e-10!72;UBERON:0003729!2.24e-10!5;UBERON:0001737!1.02e-09!9;UBERON:0000161!2.97e-09!35;UBERON:0003343!1.12e-08!4;UBERON:0004785!1.12e-08!4;UBERON:0000064!8.79e-08!219;UBERON:0001949!9.94e-08!3;UBERON:0005157!1.45e-07!51;UBERON:0004119!5.40e-07!169;UBERON:0000925!5.40e-07!169;UBERON:0006595!5.40e-07!169;UBERON:0000166!8.79e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.20e-25;3!UBERON:0003729;4.02e-13;13!UBERON:0003929;2.83e-11;7!UBERON:0002419;2.37e-10;2!UBERON:0007771;2.37e-10;2!UBERON:0003297;2.37e-10;2!UBERON:0001821;2.37e-10;2!UBERON:0003487;2.37e-10;2!UBERON:0001820;2.37e-10;2!UBERON:0003350;5.54e-10;8!UBERON:0001828;5.54e-10;8!UBERON:0000161;3.57e-09;19!UBERON:0000166;3.57e-09;19!UBERON:0000344;9.60e-09;20!UBERON:0000486;5.98e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.64e-25,3;UBERON:0003729,2.60e-13,13;UBERON:0002419,2.99e-10,2;UBERON:0007771,2.99e-10,2;UBERON:0003297,2.99e-10,2;UBERON:0001821,2.99e-10,2;UBERON:0003487,2.99e-10,2;UBERON:0001820,2.99e-10,2;UBERON:0005089,2.99e-10,2;UBERON:0005088,2.99e-10,2;UBERON:0003350,4.03e-10,8;UBERON:0001828,4.03e-10,8;UBERON:0000344,7.26e-09,20;UBERON:0000166,4.13e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93260853163297,0.545492241181669,1.72082757233402,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0.505754070234305,0.482022059766964,0.220587945464788,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.100528972411631,0.370353780634118,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0.895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,1.46045156871989,1.52795370223311,3.51652341630141,0,1.02827492703324,1.20137223137567,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.40101294060657,0.0920809889358963,0,0,0,0.902399225814824,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.671624264166535,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0.661139661443912,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.153900517007594,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0.293977192243133,0.522355239482415,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0,1.0063040627978,0.0788057072991982,0.0524545881349981,0.316801009558219,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0.231522474323834,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,1.86480665151949,0.11796972334774,0.366857197043358,0.577628330751691,0,0,0,0.376051641746286,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0.357382720883282,0,0,0,0,0.62164849248911,0.85359238546975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0.315543124386369,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0,0,0.534434810531121,0.459474497674225,0.50141507858475,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:68679512..68679523,+ | |||
}} |
Latest revision as of 11:46, 25 July 2015
Short description: | p@chr16:68679512..68679523, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:68679512..68679523, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.62e-45 | 10 |
melanoblast | 5.62e-45 | 10 |
pigment cell | 3.20e-32 | 14 |
light melanocyte | 2.64e-25 | 3 |
gingival epithelial cell | 2.64e-25 | 3 |
neurecto-epithelial cell | 1.24e-22 | 20 |
dark melanocyte | 2.25e-19 | 1 |
ecto-epithelial cell | 6.15e-19 | 34 |
columnar/cuboidal epithelial cell | 8.17e-17 | 27 |
migratory neural crest cell | 1.34e-10 | 41 |
sebum secreting cell | 2.99e-10 | 2 |
epithelial cell of sweat gland | 2.99e-10 | 2 |
epithelial cell of skin gland | 2.99e-10 | 2 |
acinar cell of sebaceous gland | 2.99e-10 | 2 |
epithelial cell of alimentary canal | 7.26e-09 | 20 |
ectodermal cell | 1.24e-08 | 72 |
neurectodermal cell | 1.76e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.64e-25 | 3 |
mouth mucosa | 2.60e-13 | 13 |
skin gland | 2.99e-10 | 2 |
epidermis gland | 2.99e-10 | 2 |
gland of integumental system | 2.99e-10 | 2 |
sebaceous gland | 2.99e-10 | 2 |
skin sebaceous gland | 2.99e-10 | 2 |
sweat gland | 2.99e-10 | 2 |
sweat gland placode | 2.99e-10 | 2 |
sebaceous gland placode | 2.99e-10 | 2 |
epithelium of mucosa | 4.03e-10 | 8 |
gingiva | 4.03e-10 | 8 |
mucosa | 7.26e-09 | 20 |
oral opening | 4.13e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.62e-19 | 1 |
keratoacanthoma | 5.62e-19 | 1 |
skin carcinoma | 3.58e-10 | 2 |
skin cancer | 3.58e-10 | 2 |
integumentary system cancer | 3.58e-10 | 2 |