FFCP PHASE1:Hg19::chr16:80552480..80552487,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:80552480..80552487,- | |||
|description=CAGE_peak_at_chr16:80552480..80552487,- | |description=CAGE_peak_at_chr16:80552480..80552487,- | ||
|id=chr16:80552480..80552487,- | |id=chr16:80552480..80552487,- | ||
|ontology_enrichment_celltype=CL:0000064!6.35e-14!3;CL:0005012!6.35e-14!3;CL:0000067!6.35e-14!3;CL:0002304!6.35e-14!3;CL:0002322!7.20e-08!5;CL:0000075!8.76e-07!27 | |ontology_enrichment_celltype=CL:0000064!6.35e-14!3;CL:0005012!6.35e-14!3;CL:0000067!6.35e-14!3;CL:0002304!6.35e-14!3;CL:0002322!7.20e-08!5;CL:0000075!8.76e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000342;3.30e-40;1!CL:0002565;3.30e-40;1!CL:0000064;1.22e-14;3!CL:0000067;1.22e-14;3!CL:0005012;1.22e-14;3!CL:0002304;1.22e-14;3!CL:0000306;3.26e-11;4!CL:0002222;3.26e-11;4!CL:0002224;3.26e-11;4!CL:0000075;6.72e-07;27 | |ontology_enrichment_celltype_v019=CL:0000342;3.30e-40;1!CL:0002565;3.30e-40;1!CL:0000064;1.22e-14;3!CL:0000067;1.22e-14;3!CL:0005012;1.22e-14;3!CL:0002304;1.22e-14;3!CL:0000306;3.26e-11;4!CL:0002222;3.26e-11;4!CL:0002224;3.26e-11;4!CL:0000075;6.72e-07;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0000342,3.30e-40,1;CL:0002565,3.30e-40,1;CL:0000064,1.22e-14,3;CL:0000067,1.22e-14,3;CL:0005012,1.22e-14,3;CL:0002304,1.22e-14,3;CL:0000306,3.10e-11,4;CL:0002222,3.10e-11,4;CL:0002224,3.10e-11,4;CL:0000075,6.62e-07,27 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr16:80552480..80552487,- | |short_description=p@chr16:80552480..80552487,- | ||
}} | }} |
Latest revision as of 12:36, 25 July 2015
Short description: | p@chr16:80552480..80552487, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:80552480..80552487, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 3.30e-40 | 1 |
iris pigment epithelial cell | 3.30e-40 | 1 |
ciliated cell | 1.22e-14 | 3 |
ciliated epithelial cell | 1.22e-14 | 3 |
multi-ciliated epithelial cell | 1.22e-14 | 3 |
non-pigmented ciliary epithelial cell | 1.22e-14 | 3 |
crystallin accumulating cell | 3.10e-11 | 4 |
vertebrate lens cell | 3.10e-11 | 4 |
lens epithelial cell | 3.10e-11 | 4 |
columnar/cuboidal epithelial cell | 6.62e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 2.71e-40 | 4 |
iris epithelium | 3.30e-40 | 1 |
iris | 3.30e-40 | 1 |
pigment epithelium of eye | 5.35e-33 | 11 |
vasculature of eye | 2.72e-27 | 6 |
uvea | 2.72e-27 | 6 |
vasculature of head | 2.72e-27 | 6 |
anterior segment of eyeball | 3.76e-26 | 14 |
camera-type eye | 1.34e-18 | 20 |
simple eye | 1.34e-18 | 20 |
immature eye | 1.34e-18 | 20 |
ocular region | 1.34e-18 | 20 |
eyeball of camera-type eye | 1.34e-18 | 20 |
optic cup | 1.34e-18 | 20 |
optic vesicle | 1.34e-18 | 20 |
eye primordium | 1.34e-18 | 20 |
eye | 9.30e-18 | 21 |
visual system | 9.30e-18 | 21 |
face | 5.41e-17 | 22 |
sense organ | 1.19e-15 | 24 |
sensory system | 1.19e-15 | 24 |
entire sense organ system | 1.19e-15 | 24 |
vasculature of organ | 2.02e-15 | 11 |
ciliary epithelium | 1.22e-14 | 3 |
ciliary body | 1.22e-14 | 3 |
ectodermal placode | 2.58e-12 | 31 |
cuboidal epithelium | 3.10e-11 | 4 |
transparent eye structure | 3.10e-11 | 4 |
simple cuboidal epithelium | 3.10e-11 | 4 |
cranial placode | 3.10e-11 | 4 |
lens of camera-type eye | 3.10e-11 | 4 |
epithelium of lens | 3.10e-11 | 4 |
lens placode | 3.10e-11 | 4 |
lens vesicle | 3.10e-11 | 4 |
subdivision of head | 4.43e-08 | 49 |
neurectoderm | 5.87e-08 | 86 |
head | 3.68e-07 | 56 |