FFCP PHASE1:Hg19::chr16:84600281..84600315,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:84600281..84600315,- | |||
|coexpression_cluster_id=C842 | |||
|description=CAGE_peak_at_chr16:84600281..84600315,- | |description=CAGE_peak_at_chr16:84600281..84600315,- | ||
|id=chr16:84600281..84600315,- | |id=chr16:84600281..84600315,- | ||
|ontology_enrichment_celltype=CL:0000766!1.91e-23!76;CL:0002057!6.02e-23!42;CL:0002194!1.86e-20!63;CL:0000576!1.86e-20!63;CL:0000040!1.86e-20!63;CL:0000559!1.86e-20!63;CL:0000860!1.95e-20!45;CL:0000557!3.16e-19!71;CL:0000839!3.70e-19!70;CL:0002009!1.47e-18!65;CL:0000144!5.92e-15!625;CL:0002371!2.10e-14!591;CL:0000048!1.81e-11!430;CL:0000548!1.88e-11!679;CL:0000004!1.88e-11!679;CL:0000255!1.88e-11!679;CL:0000723!2.54e-11!436;CL:0000763!2.70e-11!112;CL:0000049!2.70e-11!112;CL:0000738!5.80e-11!140;CL:0000012!7.30e-11!682;CL:0000034!1.10e-10!444;CL:0000003!2.04e-10!722;CL:0000222!7.18e-10!119;CL:0002087!1.56e-09!119;CL:0002031!8.09e-08!124;CL:0000183!2.33e-07!59;CL:0000680!9.08e-07!57;CL:0000056!9.08e-07!57;CL:0000355!9.08e-07!57 | |ontology_enrichment_celltype=CL:0000766!1.91e-23!76;CL:0002057!6.02e-23!42;CL:0002194!1.86e-20!63;CL:0000576!1.86e-20!63;CL:0000040!1.86e-20!63;CL:0000559!1.86e-20!63;CL:0000860!1.95e-20!45;CL:0000557!3.16e-19!71;CL:0000839!3.70e-19!70;CL:0002009!1.47e-18!65;CL:0000144!5.92e-15!625;CL:0002371!2.10e-14!591;CL:0000048!1.81e-11!430;CL:0000548!1.88e-11!679;CL:0000004!1.88e-11!679;CL:0000255!1.88e-11!679;CL:0000723!2.54e-11!436;CL:0000763!2.70e-11!112;CL:0000049!2.70e-11!112;CL:0000738!5.80e-11!140;CL:0000012!7.30e-11!682;CL:0000034!1.10e-10!444;CL:0000003!2.04e-10!722;CL:0000222!7.18e-10!119;CL:0002087!1.56e-09!119;CL:0002031!8.09e-08!124;CL:0000183!2.33e-07!59;CL:0000680!9.08e-07!57;CL:0000056!9.08e-07!57;CL:0000355!9.08e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.24e-20;33!CL:0002057;1.24e-20;33!CL:0000576;4.47e-18;48!CL:0000473;1.20e-17;39!CL:0000234;1.20e-17;39!CL:0000766;1.60e-14;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.31e-30,72;CL:0000473,1.15e-28,48;CL:0000234,1.15e-28,48;CL:0000860,1.20e-28,42;CL:0002057,1.20e-28,42;CL:0002194,5.41e-26,59;CL:0000576,5.41e-26,59;CL:0000040,5.41e-26,59;CL:0000559,5.41e-26,59;CL:0000557,6.88e-25,67;CL:0000839,8.16e-25,66;CL:0002009,2.34e-24,61;CL:0000763,6.17e-16,108;CL:0000049,6.17e-16,108;CL:0000738,5.63e-14,136;CL:0000048,6.19e-12,427;CL:0000723,7.29e-12,433;CL:0002087,6.24e-11,115;CL:0000034,6.98e-11,441;CL:0002031,1.23e-09,120;CL:0000222,2.59e-09,121;CL:0000037,7.79e-08,168;CL:0000988,9.18e-08,177;CL:0002032,1.14e-07,161;CL:0000837,1.14e-07,161;CL:0002393,3.27e-07,9;CL:0002397,3.27e-07,9;CL:0002320,8.12e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;7.85e-21;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.11e-16!167;UBERON:0002371!7.95e-15!80;UBERON:0003081!7.81e-14!216;UBERON:0002193!1.65e-13!112;UBERON:0002390!2.88e-13!102;UBERON:0003061!2.88e-13!102;UBERON:0001474!7.30e-13!86;UBERON:0004765!3.79e-12!101;UBERON:0001434!3.79e-12!101;UBERON:0002405!7.54e-09!115 | |ontology_enrichment_uberon=UBERON:0002204!2.11e-16!167;UBERON:0002371!7.95e-15!80;UBERON:0003081!7.81e-14!216;UBERON:0002193!1.65e-13!112;UBERON:0002390!2.88e-13!102;UBERON:0003061!2.88e-13!102;UBERON:0001474!7.30e-13!86;UBERON:0004765!3.79e-12!101;UBERON:0001434!3.79e-12!101;UBERON:0002405!7.54e-09!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.32e-19,76;UBERON:0002390,4.32e-18,98;UBERON:0003061,4.32e-18,98;UBERON:0003081,1.09e-17,203;UBERON:0002204,2.89e-17,167;UBERON:0001474,3.31e-17,82;UBERON:0002193,8.36e-17,108;UBERON:0002405,2.19e-16,93;UBERON:0000926,3.06e-15,315;UBERON:0004120,3.06e-15,315;UBERON:0006603,3.06e-15,315;UBERON:0004765,4.06e-15,90;UBERON:0001434,1.43e-14,100 | |||
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| ||
|short_description=p@chr16:84600281..84600315,- | |short_description=p@chr16:84600281..84600315,- | ||
}} | }} |
Latest revision as of 12:54, 25 July 2015
Short description: | p@chr16:84600281..84600315, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:84600281..84600315, - |
Coexpression cluster: | C842_Neutrophils_CD14CD16_CD14_Eosinophils_migratory_Mesenchymal_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.31e-30 | 72 |
defensive cell | 1.15e-28 | 48 |
phagocyte | 1.15e-28 | 48 |
classical monocyte | 1.20e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.20e-28 | 42 |
monopoietic cell | 5.41e-26 | 59 |
monocyte | 5.41e-26 | 59 |
monoblast | 5.41e-26 | 59 |
promonocyte | 5.41e-26 | 59 |
granulocyte monocyte progenitor cell | 6.88e-25 | 67 |
myeloid lineage restricted progenitor cell | 8.16e-25 | 66 |
macrophage dendritic cell progenitor | 2.34e-24 | 61 |
myeloid cell | 6.17e-16 | 108 |
common myeloid progenitor | 6.17e-16 | 108 |
leukocyte | 5.63e-14 | 136 |
multi fate stem cell | 6.19e-12 | 427 |
somatic stem cell | 7.29e-12 | 433 |
nongranular leukocyte | 6.24e-11 | 115 |
stem cell | 6.98e-11 | 441 |
hematopoietic lineage restricted progenitor cell | 1.23e-09 | 120 |
mesodermal cell | 2.59e-09 | 121 |
hematopoietic stem cell | 7.79e-08 | 168 |
hematopoietic cell | 9.18e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.14e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-07 | 161 |
intermediate monocyte | 3.27e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.27e-07 | 9 |
connective tissue cell | 8.12e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.32e-19 | 76 |
hematopoietic system | 4.32e-18 | 98 |
blood island | 4.32e-18 | 98 |
lateral plate mesoderm | 1.09e-17 | 203 |
musculoskeletal system | 2.89e-17 | 167 |
bone element | 3.31e-17 | 82 |
hemolymphoid system | 8.36e-17 | 108 |
immune system | 2.19e-16 | 93 |
mesoderm | 3.06e-15 | 315 |
mesoderm-derived structure | 3.06e-15 | 315 |
presumptive mesoderm | 3.06e-15 | 315 |
skeletal element | 4.06e-15 | 90 |
skeletal system | 1.43e-14 | 100 |