FFCP PHASE1:Hg19::chr16:84600468..84600488,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:84600468..84600488,- to FFCP PHASE1:Hg19::chr16:84600468..84600488,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:84600468..84600488,- | |||
|coexpression_cluster_id=C842 | |||
|description=CAGE_peak_at_chr16:84600468..84600488,- | |||
|id=chr16:84600468..84600488,- | |||
|ontology_enrichment_celltype=CL:0000144!1.27e-24!625;CL:0002371!2.02e-24!591;CL:0002057!4.00e-24!42;CL:0000860!1.67e-23!45;CL:0000548!6.74e-23!679;CL:0000004!6.74e-23!679;CL:0000255!6.74e-23!679;CL:0000003!1.77e-22!722;CL:0000012!1.06e-21!682;CL:0000766!6.88e-21!76;CL:0002194!6.89e-20!63;CL:0000576!6.89e-20!63;CL:0000040!6.89e-20!63;CL:0000559!6.89e-20!63;CL:0000048!2.67e-19!430;CL:0000723!5.89e-19!436;CL:0002009!1.17e-18!65;CL:0000034!2.79e-18!444;CL:0000839!2.12e-16!70;CL:0000557!5.47e-16!71;CL:0000063!5.46e-15!578;CL:0002320!6.67e-14!365;CL:0000134!4.43e-13!358;CL:0000763!7.14e-12!112;CL:0000049!7.14e-12!112;CL:0000738!8.44e-12!140;CL:0002087!2.76e-11!119;CL:0000219!1.04e-09!390;CL:0002031!1.13e-08!124;CL:0000222!2.83e-08!119;CL:0002032!8.78e-08!165;CL:0000837!8.78e-08!165;CL:0000037!3.84e-07!172;CL:0000566!3.84e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-18;33!CL:0002057;1.15e-18;33!CL:0000473;6.98e-16;39!CL:0000234;6.98e-16;39!CL:0000576;2.74e-14;48!CL:0000766;1.30e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.78e-25,48;CL:0000234,8.78e-25,48;CL:0000860,1.83e-24,42;CL:0002057,1.83e-24,42;CL:0000766,2.75e-21,72;CL:0002194,1.33e-20,59;CL:0000576,1.33e-20,59;CL:0000040,1.33e-20,59;CL:0000559,1.33e-20,59;CL:0000048,5.44e-20,427;CL:0000723,1.03e-19,433;CL:0002009,4.26e-19,61;CL:0000034,4.37e-19,441;CL:0000839,1.26e-16,66;CL:0000557,3.40e-16,67;CL:0002320,3.63e-14,361;CL:0000134,2.49e-13,354;CL:0000763,2.99e-12,108;CL:0000049,2.99e-12,108;CL:0000738,3.71e-12,136;CL:0002087,1.24e-11,115;CL:0000219,1.13e-09,386;CL:0002031,1.04e-08,120;CL:0000222,1.05e-08,121;CL:0002032,3.91e-08,161;CL:0000837,3.91e-08,161;CL:0000037,1.44e-07,168;CL:0000988,9.04e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.30e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!7.28e-15!167;UBERON:0002371!2.95e-14!80;UBERON:0003081!1.30e-12!216;UBERON:0002390!1.65e-12!102;UBERON:0003061!1.65e-12!102;UBERON:0002193!2.67e-12!112;UBERON:0004765!4.54e-12!101;UBERON:0001434!4.54e-12!101;UBERON:0002384!7.30e-12!375;UBERON:0001474!1.15e-11!86;UBERON:0002405!3.24e-08!115;UBERON:0000926!5.97e-07!448;UBERON:0004120!5.97e-07!448;UBERON:0006603!5.97e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.31e-15,167;UBERON:0002371,1.88e-14,76;UBERON:0000926,8.25e-13,315;UBERON:0004120,8.25e-13,315;UBERON:0006603,8.25e-13,315;UBERON:0001434,1.16e-12,100;UBERON:0004765,1.52e-12,90;UBERON:0002390,1.65e-12,98;UBERON:0003061,1.65e-12,98;UBERON:0002193,2.69e-12,108;UBERON:0002384,3.18e-12,371;UBERON:0002405,5.70e-12,93;UBERON:0001474,7.07e-12,82;UBERON:0003081,1.08e-11,203;UBERON:0007503,5.63e-07,78 | |||
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| ||
|short_description=p@chr16:84600468..84600488,- | |||
}} | }} |
Latest revision as of 12:54, 25 July 2015
Short description: | p@chr16:84600468..84600488, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:84600468..84600488, - |
Coexpression cluster: | C842_Neutrophils_CD14CD16_CD14_Eosinophils_migratory_Mesenchymal_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.78e-25 | 48 |
phagocyte | 8.78e-25 | 48 |
classical monocyte | 1.83e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-24 | 42 |
myeloid leukocyte | 2.75e-21 | 72 |
monopoietic cell | 1.33e-20 | 59 |
monocyte | 1.33e-20 | 59 |
monoblast | 1.33e-20 | 59 |
promonocyte | 1.33e-20 | 59 |
multi fate stem cell | 5.44e-20 | 427 |
somatic stem cell | 1.03e-19 | 433 |
macrophage dendritic cell progenitor | 4.26e-19 | 61 |
stem cell | 4.37e-19 | 441 |
myeloid lineage restricted progenitor cell | 1.26e-16 | 66 |
granulocyte monocyte progenitor cell | 3.40e-16 | 67 |
connective tissue cell | 3.63e-14 | 361 |
mesenchymal cell | 2.49e-13 | 354 |
myeloid cell | 2.99e-12 | 108 |
common myeloid progenitor | 2.99e-12 | 108 |
leukocyte | 3.71e-12 | 136 |
nongranular leukocyte | 1.24e-11 | 115 |
motile cell | 1.13e-09 | 386 |
hematopoietic lineage restricted progenitor cell | 1.04e-08 | 120 |
mesodermal cell | 1.05e-08 | 121 |
hematopoietic oligopotent progenitor cell | 3.91e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.91e-08 | 161 |
hematopoietic stem cell | 1.44e-07 | 168 |
hematopoietic cell | 9.04e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.31e-15 | 167 |
bone marrow | 1.88e-14 | 76 |
mesoderm | 8.25e-13 | 315 |
mesoderm-derived structure | 8.25e-13 | 315 |
presumptive mesoderm | 8.25e-13 | 315 |
skeletal system | 1.16e-12 | 100 |
skeletal element | 1.52e-12 | 90 |
hematopoietic system | 1.65e-12 | 98 |
blood island | 1.65e-12 | 98 |
hemolymphoid system | 2.69e-12 | 108 |
connective tissue | 3.18e-12 | 371 |
immune system | 5.70e-12 | 93 |
bone element | 7.07e-12 | 82 |
lateral plate mesoderm | 1.08e-11 | 203 |
epithelial vesicle | 5.63e-07 | 78 |