FFCP PHASE1:Hg19::chr16:86256667..86256687,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:86256667..86256687,- | |||
|coexpression_cluster_id=C1770 | |coexpression_cluster_id=C1770 | ||
|description=CAGE_peak_at_chr16:86256667..86256687,- | |description=CAGE_peak_at_chr16:86256667..86256687,- | ||
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|ontology_enrichment_celltype=CL:0000055!2.27e-11!180;CL:0000057!5.00e-11!75;CL:0002556!9.36e-09!6 | |ontology_enrichment_celltype=CL:0000055!2.27e-11!180;CL:0000057!5.00e-11!75;CL:0002556!9.36e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0002622;2.81e-16;3!CL:0002504;3.34e-15;3!CL:1000279;3.34e-15;3!CL:1000280;3.34e-15;3!CL:1000487;2.40e-11;2!CL:0002195;9.53e-11;2!CL:0002571;9.53e-11;2!CL:0002552;1.44e-09;5!CL:0002615;1.93e-07;3 | |ontology_enrichment_celltype_v019=CL:0002622;2.81e-16;3!CL:0002504;3.34e-15;3!CL:1000279;3.34e-15;3!CL:1000280;3.34e-15;3!CL:1000487;2.40e-11;2!CL:0002195;9.53e-11;2!CL:0002571;9.53e-11;2!CL:0002552;1.44e-09;5!CL:0002615;1.93e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002622,2.82e-16,3;CL:0002504,2.96e-15,3;CL:1000279,2.96e-15,3;CL:1000280,2.96e-15,3;CL:1000487,2.34e-11,2;CL:0002195,8.23e-11,2;CL:0002571,8.23e-11,2;CL:0002552,1.88e-09,5;CL:0002615,1.30e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;1.43e-11;2 | |ontology_enrichment_disease_v019=DOID:3307;1.43e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3307,1.40e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001758!9.36e-09!6;UBERON:0003672!9.36e-09!6;UBERON:0000059!5.82e-08!11;UBERON:0001155!8.92e-08!9;UBERON:0001046!1.44e-07!19;UBERON:0000162!1.71e-07!14;UBERON:0001353!1.71e-07!14;UBERON:0000163!1.71e-07!14;UBERON:0006866!1.71e-07!14;UBERON:0000164!1.71e-07!14;UBERON:0000931!1.71e-07!14;UBERON:0003102!1.73e-07!95;UBERON:0004122!7.56e-07!15 | |ontology_enrichment_uberon=UBERON:0001758!9.36e-09!6;UBERON:0003672!9.36e-09!6;UBERON:0000059!5.82e-08!11;UBERON:0001155!8.92e-08!9;UBERON:0001046!1.44e-07!19;UBERON:0000162!1.71e-07!14;UBERON:0001353!1.71e-07!14;UBERON:0000163!1.71e-07!14;UBERON:0006866!1.71e-07!14;UBERON:0000164!1.71e-07!14;UBERON:0000931!1.71e-07!14;UBERON:0003102!1.73e-07!95;UBERON:0004122!7.56e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002367;1.29e-11;11!UBERON:0010147;1.29e-11;11!UBERON:0003937;1.27e-10;12!UBERON:0005399;1.27e-10;12!UBERON:0003688;8.45e-08;6!UBERON:0002358;8.45e-08;6!UBERON:0003684;8.45e-08;6!UBERON:0001178;8.45e-08;6!UBERON:0003104;7.00e-07;7!UBERON:0009142;7.00e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0002367;1.29e-11;11!UBERON:0010147;1.29e-11;11!UBERON:0003937;1.27e-10;12!UBERON:0005399;1.27e-10;12!UBERON:0003688;8.45e-08;6!UBERON:0002358;8.45e-08;6!UBERON:0003684;8.45e-08;6!UBERON:0001178;8.45e-08;6!UBERON:0003104;7.00e-07;7!UBERON:0009142;7.00e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,1.28e-11,11;UBERON:0010147,1.28e-11,11;UBERON:0009846,1.28e-11,11;UBERON:0003353,1.28e-11,11;UBERON:0004902,1.28e-11,11;UBERON:0003820,1.28e-11,11;UBERON:0009847,1.28e-11,11;UBERON:0003937,1.26e-10,12;UBERON:0005399,1.26e-10,12;UBERON:0000161,6.26e-10,36;UBERON:0000162,4.60e-09,14;UBERON:0001353,4.60e-09,14;UBERON:0000163,4.60e-09,14;UBERON:0006866,4.60e-09,14;UBERON:0000164,4.60e-09,14;UBERON:0000931,4.60e-09,14;UBERON:0004122,1.94e-08,15;UBERON:0003688,6.28e-08,6;UBERON:0002358,6.28e-08,6;UBERON:0003684,6.28e-08,6;UBERON:0001178,6.28e-08,6;UBERON:0001007,4.12e-07,145;UBERON:0001555,4.12e-07,145;UBERON:0007026,4.12e-07,145 | |||
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| ||
|short_description=p@chr16:86256667..86256687,- | |short_description=p@chr16:86256667..86256687,- | ||
}} | }} |
Latest revision as of 13:05, 25 July 2015
Short description: | p@chr16:86256667..86256687, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:86256667..86256687, - |
Coexpression cluster: | C1770_normal_sacrococcigeal_tridermal_Prostate_Smooth_rectum_smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 2.82e-16 | 3 |
enteric smooth muscle cell | 2.96e-15 | 3 |
smooth muscle cell of large intestine | 2.96e-15 | 3 |
smooth muscle cell of colon | 2.96e-15 | 3 |
smooth muscle cell of prostate | 2.34e-11 | 2 |
hepatic stem cell | 8.23e-11 | 2 |
hepatic mesenchymal stem cell | 8.23e-11 | 2 |
fibroblast of gingiva | 1.88e-09 | 5 |
adipocyte of omentum tissue | 1.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 1.28e-11 | 11 |
male accessory sex gland | 1.28e-11 | 11 |
embryonic cloacal epithelium | 1.28e-11 | 11 |
epithelium of hindgut | 1.28e-11 | 11 |
urogenital sinus epithelium | 1.28e-11 | 11 |
prostate bud | 1.28e-11 | 11 |
prostate field | 1.28e-11 | 11 |
sex gland | 1.26e-10 | 12 |
male reproductive gland | 1.26e-10 | 12 |
orifice | 6.26e-10 | 36 |
cloaca | 4.60e-09 | 14 |
anal region | 4.60e-09 | 14 |
embryonic cloaca | 4.60e-09 | 14 |
terminal part of digestive tract | 4.60e-09 | 14 |
primitive urogenital sinus | 4.60e-09 | 14 |
proctodeum | 4.60e-09 | 14 |
genitourinary system | 1.94e-08 | 15 |
omentum | 6.28e-08 | 6 |
peritoneum | 6.28e-08 | 6 |
abdominal cavity | 6.28e-08 | 6 |
visceral peritoneum | 6.28e-08 | 6 |
digestive system | 4.12e-07 | 145 |
digestive tract | 4.12e-07 | 145 |
primitive gut | 4.12e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.40e-11 | 2 |