FFCP PHASE1:Hg19::chr16:86256667..86256687,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:86256667..86256687,- | |||
|coexpression_cluster_id=C1770 | |||
|description=CAGE_peak_at_chr16:86256667..86256687,- | |||
|id=chr16:86256667..86256687,- | |||
|ontology_enrichment_celltype=CL:0000055!2.27e-11!180;CL:0000057!5.00e-11!75;CL:0002556!9.36e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002622;2.81e-16;3!CL:0002504;3.34e-15;3!CL:1000279;3.34e-15;3!CL:1000280;3.34e-15;3!CL:1000487;2.40e-11;2!CL:0002195;9.53e-11;2!CL:0002571;9.53e-11;2!CL:0002552;1.44e-09;5!CL:0002615;1.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,2.82e-16,3;CL:0002504,2.96e-15,3;CL:1000279,2.96e-15,3;CL:1000280,2.96e-15,3;CL:1000487,2.34e-11,2;CL:0002195,8.23e-11,2;CL:0002571,8.23e-11,2;CL:0002552,1.88e-09,5;CL:0002615,1.30e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.43e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.40e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001758!9.36e-09!6;UBERON:0003672!9.36e-09!6;UBERON:0000059!5.82e-08!11;UBERON:0001155!8.92e-08!9;UBERON:0001046!1.44e-07!19;UBERON:0000162!1.71e-07!14;UBERON:0001353!1.71e-07!14;UBERON:0000163!1.71e-07!14;UBERON:0006866!1.71e-07!14;UBERON:0000164!1.71e-07!14;UBERON:0000931!1.71e-07!14;UBERON:0003102!1.73e-07!95;UBERON:0004122!7.56e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;1.29e-11;11!UBERON:0010147;1.29e-11;11!UBERON:0003937;1.27e-10;12!UBERON:0005399;1.27e-10;12!UBERON:0003688;8.45e-08;6!UBERON:0002358;8.45e-08;6!UBERON:0003684;8.45e-08;6!UBERON:0001178;8.45e-08;6!UBERON:0003104;7.00e-07;7!UBERON:0009142;7.00e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,1.28e-11,11;UBERON:0010147,1.28e-11,11;UBERON:0009846,1.28e-11,11;UBERON:0003353,1.28e-11,11;UBERON:0004902,1.28e-11,11;UBERON:0003820,1.28e-11,11;UBERON:0009847,1.28e-11,11;UBERON:0003937,1.26e-10,12;UBERON:0005399,1.26e-10,12;UBERON:0000161,6.26e-10,36;UBERON:0000162,4.60e-09,14;UBERON:0001353,4.60e-09,14;UBERON:0000163,4.60e-09,14;UBERON:0006866,4.60e-09,14;UBERON:0000164,4.60e-09,14;UBERON:0000931,4.60e-09,14;UBERON:0004122,1.94e-08,15;UBERON:0003688,6.28e-08,6;UBERON:0002358,6.28e-08,6;UBERON:0003684,6.28e-08,6;UBERON:0001178,6.28e-08,6;UBERON:0001007,4.12e-07,145;UBERON:0001555,4.12e-07,145;UBERON:0007026,4.12e-07,145 | |||
|phase1_expression=0,0,2.96004248601539,0,1.78784437770915,0.872338524100369,0,0,0,0.737201809504527,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,1.25381888591235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,1.43418310374407,0.709336764396714,0,0,0,0,0.404132016209064,0,0,0,2.57753575017176,0,0,0,0,0,0,0,0.245668634623536,2.47981874821837,1.18800285728205,6.42894016124248,0,1.43723628363248,0.673344455816265,0.500474079487857,0.277064115484183,1.75591048352335,0.612975591598039,4.35690370829131,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0,0.0920498986422993,0.969876340912871,0.355009592516614,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.84197441151682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0.26593811658487,0,0,0,0,2.85955987316295,0,0,0,1.42156779497018,1.58390374586686,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0,0.813795071099207,0.415941723061614,0.356857977594324,2.68094105557689,0.937131319941706,0.300946099727719,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0,0,1.40953064181271,0,0.965123526861645,0,0,0,0,0.519254429183621,0,0,0,0.276242966807689,7.69256802702865,4.00600569614778,5.50722542829581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.96670718292122,0,0.15350367472613,0.137836572484531,0.214840489736547,0,0,0.712256285173899,0,0,0,0,1.39453664789186,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0.855877976067841,0,0,3.23770423649967,1.64722217841633,1.29593642580255,0.404364963146632,0,0,0.975267478179181,0.487426979262569,0,6.55199574758332,3.39373036688911,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,2.48332744849418,0,0,0,0.349934720244983,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74301541630384,0.139423744278603,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.530745387020035,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0.0967563312890851,1.16942907337897,0.246346371159628,0.0969890164884194,0.0882561266915003,0,0,0.19871461170299,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,1.1524383839052,0,0,0,0,7.64986632272413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0.701139929541673,0,0,0,0,7.32288218870155,0.151230923763239,0.15543720058278,0,0,0.449803112163605,0.155262956876259,0.414706207840855,0.53168342911599,0,0,0.380805212168795,0,0,0.214821114084977,0,0,0,0.343395705182793,0.336749488765919,0,0,0,1.30497145982606,0,0,0.734210113519403,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.8168985922671,17.1497467317792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0.313972371402056,0,0,0.913158720509496,0,0,0,0,0,0,5.61197955311177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0,0,0.490296643507811,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0,0.401206833445841,0,0,0,0,0.0679914901909147,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.476128862927481,0,0,0,0,0,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,11.5843369372164,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr16:86256667..86256687,- | |||
}} |
Latest revision as of 13:05, 25 July 2015
Short description: | p@chr16:86256667..86256687, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:86256667..86256687, - |
Coexpression cluster: | C1770_normal_sacrococcigeal_tridermal_Prostate_Smooth_rectum_smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 2.82e-16 | 3 |
enteric smooth muscle cell | 2.96e-15 | 3 |
smooth muscle cell of large intestine | 2.96e-15 | 3 |
smooth muscle cell of colon | 2.96e-15 | 3 |
smooth muscle cell of prostate | 2.34e-11 | 2 |
hepatic stem cell | 8.23e-11 | 2 |
hepatic mesenchymal stem cell | 8.23e-11 | 2 |
fibroblast of gingiva | 1.88e-09 | 5 |
adipocyte of omentum tissue | 1.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 1.28e-11 | 11 |
male accessory sex gland | 1.28e-11 | 11 |
embryonic cloacal epithelium | 1.28e-11 | 11 |
epithelium of hindgut | 1.28e-11 | 11 |
urogenital sinus epithelium | 1.28e-11 | 11 |
prostate bud | 1.28e-11 | 11 |
prostate field | 1.28e-11 | 11 |
sex gland | 1.26e-10 | 12 |
male reproductive gland | 1.26e-10 | 12 |
orifice | 6.26e-10 | 36 |
cloaca | 4.60e-09 | 14 |
anal region | 4.60e-09 | 14 |
embryonic cloaca | 4.60e-09 | 14 |
terminal part of digestive tract | 4.60e-09 | 14 |
primitive urogenital sinus | 4.60e-09 | 14 |
proctodeum | 4.60e-09 | 14 |
genitourinary system | 1.94e-08 | 15 |
omentum | 6.28e-08 | 6 |
peritoneum | 6.28e-08 | 6 |
abdominal cavity | 6.28e-08 | 6 |
visceral peritoneum | 6.28e-08 | 6 |
digestive system | 4.12e-07 | 145 |
digestive tract | 4.12e-07 | 145 |
primitive gut | 4.12e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.40e-11 | 2 |