FFCP PHASE1:Hg19::chr17:171106..171120,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:171106..171120,+ | |||
|coexpression_cluster_id=C3608 | |coexpression_cluster_id=C3608 | ||
|description=CAGE_peak_at_chr17:171106..171120,+ | |description=CAGE_peak_at_chr17:171106..171120,+ | ||
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|ontology_enrichment_celltype=CL:1000507!1.33e-20!12;CL:1000494!1.33e-20!12;CL:0000239!1.57e-16!3;CL:1000615!1.57e-16!3;CL:0002306!1.57e-16!3;CL:1000449!3.23e-15!16;CL:0002681!3.85e-14!13;CL:0002584!3.85e-14!13;CL:1000497!2.02e-13!18;CL:0002518!2.02e-13!18;CL:0002322!1.75e-09!5;CL:0000075!2.85e-08!27;CL:0000650!4.20e-08!3;CL:1000618!4.20e-08!3;CL:1001318!4.20e-08!3;CL:0002173!4.20e-08!3;CL:1000500!4.20e-08!3;CL:0000322!4.99e-08!3 | |ontology_enrichment_celltype=CL:1000507!1.33e-20!12;CL:1000494!1.33e-20!12;CL:0000239!1.57e-16!3;CL:1000615!1.57e-16!3;CL:0002306!1.57e-16!3;CL:1000449!3.23e-15!16;CL:0002681!3.85e-14!13;CL:0002584!3.85e-14!13;CL:1000497!2.02e-13!18;CL:0002518!2.02e-13!18;CL:0002322!1.75e-09!5;CL:0000075!2.85e-08!27;CL:0000650!4.20e-08!3;CL:1000618!4.20e-08!3;CL:1001318!4.20e-08!3;CL:0002173!4.20e-08!3;CL:1000500!4.20e-08!3;CL:0000322!4.99e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000650;6.43e-14;2!CL:1000500;6.43e-14;2!CL:1000618;6.43e-14;2!CL:1001318;6.43e-14;2!CL:0002173;6.43e-14;2!CL:1000507;6.28e-11;10!CL:1000494;6.28e-11;10!CL:0000322;1.10e-09;3!CL:0000239;1.67e-09;3!CL:1000615;1.67e-09;3!CL:0002306;1.67e-09;3!CL:0002681;2.89e-09;12!CL:0002584;2.89e-09;12!CL:0000669;1.31e-07;4!CL:1000449;1.35e-07;15!CL:1000497;8.34e-07;17!CL:0002518;8.34e-07;17 | |ontology_enrichment_celltype_v019=CL:0000650;6.43e-14;2!CL:1000500;6.43e-14;2!CL:1000618;6.43e-14;2!CL:1001318;6.43e-14;2!CL:0002173;6.43e-14;2!CL:1000507;6.28e-11;10!CL:1000494;6.28e-11;10!CL:0000322;1.10e-09;3!CL:0000239;1.67e-09;3!CL:1000615;1.67e-09;3!CL:0002306;1.67e-09;3!CL:0002681;2.89e-09;12!CL:0002584;2.89e-09;12!CL:0000669;1.31e-07;4!CL:1000449;1.35e-07;15!CL:1000497;8.34e-07;17!CL:0002518;8.34e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000650,6.43e-14,2;CL:1000500,6.43e-14,2;CL:1000618,6.43e-14,2;CL:1001318,6.43e-14,2;CL:0002173,6.43e-14,2;CL:1000507,5.98e-11,10;CL:1000494,5.98e-11,10;CL:0000322,1.10e-09,3;CL:0000239,1.54e-09,3;CL:1000615,1.54e-09,3;CL:0002306,1.54e-09,3;CL:0002681,2.77e-09,12;CL:0002584,2.77e-09,12;CL:1000449,1.31e-07,15;CL:0000669,1.31e-07,4;CL:1000497,8.11e-07,17;CL:0002518,8.11e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0005754;4.61e-26;1!UBERON:0003918;6.92e-23;10!UBERON:0007687;6.92e-23;10!UBERON:0007297;9.40e-14;2!UBERON:0003056;1.30e-09;3!UBERON:0003104;4.22e-08;31 | |ontology_enrichment_development_v019=UBERON:0005754;4.61e-26;1!UBERON:0003918;6.92e-23;10!UBERON:0007687;6.92e-23;10!UBERON:0007297;9.40e-14;2!UBERON:0003056;1.30e-09;3!UBERON:0003104;4.22e-08;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;7.30e-14;2 | |ontology_enrichment_disease_v019=DOID:3910;7.30e-14;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,7.30e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0000058!1.87e-26!26;UBERON:0000080!5.47e-22!18;UBERON:0002120!5.47e-22!18;UBERON:0004875!5.47e-22!18;UBERON:0005721!5.47e-22!18;UBERON:0005754!5.47e-22!18;UBERON:0007297!5.47e-22!18;UBERON:0002113!2.38e-21!27;UBERON:0003918!2.38e-21!27;UBERON:0005095!2.38e-21!27;UBERON:0007687!2.38e-21!27;UBERON:0009773!1.33e-20!12;UBERON:0001231!1.33e-20!12;UBERON:0004810!1.33e-20!12;UBERON:0004876!1.25e-19!20;UBERON:0003887!1.28e-18!21;UBERON:0006555!2.25e-18!17;UBERON:0005103!2.25e-18!17;UBERON:0000083!2.25e-18!17;UBERON:0009201!2.25e-18!17;UBERON:0004819!2.25e-18!17;UBERON:0006553!2.25e-18!17;UBERON:0003074!2.25e-18!17;UBERON:0003060!2.25e-18!17;UBERON:0000489!1.15e-17!32;UBERON:0006853!1.57e-16!3;UBERON:0007685!1.57e-16!3;UBERON:0004134!1.57e-16!3;UBERON:0006947!2.50e-16!3;UBERON:0004054!2.50e-16!3;UBERON:0004211!3.23e-15!16;UBERON:0001285!3.23e-15!16;UBERON:0007684!3.23e-15!16;UBERON:0003220!3.23e-15!16;UBERON:0004208!3.23e-15!16;UBERON:0001225!3.85e-14!13;UBERON:0008987!3.85e-14!13;UBERON:0005172!2.45e-13!55;UBERON:0005173!2.45e-13!55;UBERON:0005904!2.26e-12!4;UBERON:0006554!3.02e-12!44;UBERON:0001008!6.33e-12!45;UBERON:0002417!9.35e-12!61;UBERON:0000916!9.35e-12!61;UBERON:0001851!2.26e-11!16;UBERON:0000353!1.15e-10!17;UBERON:0003064!7.01e-10!37;UBERON:0005177!6.38e-09!107;UBERON:0009569!2.87e-08!113;UBERON:0002553!3.92e-08!70;UBERON:0003567!4.20e-08!3;UBERON:0003838!4.20e-08!3;UBERON:0005169!4.20e-08!3;UBERON:0002321!4.20e-08!3;UBERON:0005215!4.20e-08!3;UBERON:0002303!4.20e-08!3;UBERON:0002319!4.20e-08!3;UBERON:0004821!4.99e-08!3;UBERON:0003215!4.99e-08!3;UBERON:0002299!4.99e-08!3;UBERON:0006524!4.99e-08!3;UBERON:0008874!4.99e-08!3;UBERON:0002169!4.99e-08!3;UBERON:0004894!4.99e-08!3;UBERON:0000466!5.68e-08!126;UBERON:0000464!7.63e-08!104;UBERON:0003886!8.73e-08!63;UBERON:0003135!1.42e-07!11;UBERON:0003103!4.88e-07!69;UBERON:0000998!8.34e-07!1;UBERON:0006868!8.34e-07!1 | |ontology_enrichment_uberon=UBERON:0000058!1.87e-26!26;UBERON:0000080!5.47e-22!18;UBERON:0002120!5.47e-22!18;UBERON:0004875!5.47e-22!18;UBERON:0005721!5.47e-22!18;UBERON:0005754!5.47e-22!18;UBERON:0007297!5.47e-22!18;UBERON:0002113!2.38e-21!27;UBERON:0003918!2.38e-21!27;UBERON:0005095!2.38e-21!27;UBERON:0007687!2.38e-21!27;UBERON:0009773!1.33e-20!12;UBERON:0001231!1.33e-20!12;UBERON:0004810!1.33e-20!12;UBERON:0004876!1.25e-19!20;UBERON:0003887!1.28e-18!21;UBERON:0006555!2.25e-18!17;UBERON:0005103!2.25e-18!17;UBERON:0000083!2.25e-18!17;UBERON:0009201!2.25e-18!17;UBERON:0004819!2.25e-18!17;UBERON:0006553!2.25e-18!17;UBERON:0003074!2.25e-18!17;UBERON:0003060!2.25e-18!17;UBERON:0000489!1.15e-17!32;UBERON:0006853!1.57e-16!3;UBERON:0007685!1.57e-16!3;UBERON:0004134!1.57e-16!3;UBERON:0006947!2.50e-16!3;UBERON:0004054!2.50e-16!3;UBERON:0004211!3.23e-15!16;UBERON:0001285!3.23e-15!16;UBERON:0007684!3.23e-15!16;UBERON:0003220!3.23e-15!16;UBERON:0004208!3.23e-15!16;UBERON:0001225!3.85e-14!13;UBERON:0008987!3.85e-14!13;UBERON:0005172!2.45e-13!55;UBERON:0005173!2.45e-13!55;UBERON:0005904!2.26e-12!4;UBERON:0006554!3.02e-12!44;UBERON:0001008!6.33e-12!45;UBERON:0002417!9.35e-12!61;UBERON:0000916!9.35e-12!61;UBERON:0001851!2.26e-11!16;UBERON:0000353!1.15e-10!17;UBERON:0003064!7.01e-10!37;UBERON:0005177!6.38e-09!107;UBERON:0009569!2.87e-08!113;UBERON:0002553!3.92e-08!70;UBERON:0003567!4.20e-08!3;UBERON:0003838!4.20e-08!3;UBERON:0005169!4.20e-08!3;UBERON:0002321!4.20e-08!3;UBERON:0005215!4.20e-08!3;UBERON:0002303!4.20e-08!3;UBERON:0002319!4.20e-08!3;UBERON:0004821!4.99e-08!3;UBERON:0003215!4.99e-08!3;UBERON:0002299!4.99e-08!3;UBERON:0006524!4.99e-08!3;UBERON:0008874!4.99e-08!3;UBERON:0002169!4.99e-08!3;UBERON:0004894!4.99e-08!3;UBERON:0000466!5.68e-08!126;UBERON:0000464!7.63e-08!104;UBERON:0003886!8.73e-08!63;UBERON:0003135!1.42e-07!11;UBERON:0003103!4.88e-07!69;UBERON:0000998!8.34e-07!1;UBERON:0006868!8.34e-07!1 | ||
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|short_description=p@chr17:171106..171120,+ | |short_description=p@chr17:171106..171120,+ | ||
}} | }} |
Latest revision as of 14:16, 25 July 2015
Short description: | p@chr17:171106..171120, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:171106..171120, + |
Coexpression cluster: | C3608_Renal_ductus_bronchioalveolar_retina_kidney_seminal_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 6.43e-14 | 2 |
kidney interstitial cell | 6.43e-14 | 2 |
juxtaglomerular complex cell | 6.43e-14 | 2 |
renal interstitial pericyte | 6.43e-14 | 2 |
extraglomerular mesangial cell | 6.43e-14 | 2 |
kidney tubule cell | 5.98e-11 | 10 |
nephron tubule epithelial cell | 5.98e-11 | 10 |
pneumocyte | 1.10e-09 | 3 |
brush border epithelial cell | 1.54e-09 | 3 |
kidney cortex tubule cell | 1.54e-09 | 3 |
epithelial cell of proximal tubule | 1.54e-09 | 3 |
kidney cortical cell | 2.77e-09 | 12 |
renal cortical epithelial cell | 2.77e-09 | 12 |
epithelial cell of nephron | 1.31e-07 | 15 |
pericyte cell | 1.31e-07 | 4 |
kidney cell | 8.11e-07 | 17 |
kidney epithelial cell | 8.11e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 7.30e-14 | 2 |