FFCP PHASE1:Hg19::chr17:2679600..2679618,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:2679600..2679618,+ | |||
|coexpression_cluster_id=C755 | |||
|description=CAGE_peak_at_chr17:2679600..2679618,+ | |description=CAGE_peak_at_chr17:2679600..2679618,+ | ||
|id=chr17:2679600..2679618,+ | |id=chr17:2679600..2679618,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.98e-131;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!2.15e-77!32;UBERON:0002619!1.33e-73!22;UBERON:0001893!9.93e-73!34;UBERON:0002020!1.03e-72!34;UBERON:0003528!1.03e-72!34;UBERON:0001950!2.09e-71!20;UBERON:0002791!5.26e-68!33;UBERON:0001049!3.50e-66!57;UBERON:0005068!3.50e-66!57;UBERON:0006241!3.50e-66!57;UBERON:0007135!3.50e-66!57;UBERON:0000956!1.03e-64!25;UBERON:0000203!1.03e-64!25;UBERON:0002780!6.69e-60!41;UBERON:0001890!6.69e-60!41;UBERON:0006240!6.69e-60!41;UBERON:0002616!8.32e-59!59;UBERON:0003080!2.08e-58!42;UBERON:0001017!9.56e-56!82;UBERON:0000955!3.96e-53!69;UBERON:0006238!3.96e-53!69;UBERON:0005743!5.65e-53!86;UBERON:0000073!1.42e-47!94;UBERON:0001016!1.42e-47!94;UBERON:0003075!1.83e-42!86;UBERON:0007284!1.83e-42!86;UBERON:0002346!2.24e-40!90;UBERON:0003056!3.40e-39!61;UBERON:0001871!5.19e-37!7;UBERON:0000033!1.64e-30!123;UBERON:0000153!7.09e-29!129;UBERON:0007811!7.09e-29!129;UBERON:0007023!3.76e-28!115;UBERON:0004121!1.68e-24!169;UBERON:0000200!2.02e-24!6;UBERON:0000924!8.03e-24!173;UBERON:0006601!8.03e-24!173;UBERON:0000349!2.00e-20!5;UBERON:0002021!1.06e-19!5;UBERON:0002771!2.64e-18!3;UBERON:0002420!2.94e-17!9;UBERON:0007245!2.94e-17!9;UBERON:0010009!2.94e-17!9;UBERON:0010011!2.94e-17!9;UBERON:0000454!2.94e-17!9;UBERON:0000025!4.05e-16!194;UBERON:0000369!2.19e-14!4;UBERON:0002435!2.19e-14!4;UBERON:0000204!2.19e-14!4;UBERON:0010082!2.19e-14!4;UBERON:0001876!5.51e-14!2;UBERON:0000064!2.03e-12!219;UBERON:0004111!5.54e-12!241;UBERON:0001872!7.76e-12!5;UBERON:0002680!4.09e-11!9;UBERON:0001895!4.09e-11!9;UBERON:0010092!4.09e-11!9;UBERON:0002308!6.07e-11!9;UBERON:0000125!6.07e-11!9;UBERON:0000477!2.59e-10!286;UBERON:0003076!5.26e-10!15;UBERON:0003057!5.26e-10!15;UBERON:0005383!2.99e-09!3;UBERON:0005382!2.99e-09!3;UBERON:0000988!1.27e-08!3;UBERON:0009663!1.97e-08!7;UBERON:0004733!2.31e-08!12;UBERON:0002028!2.31e-08!12;UBERON:0007277!2.31e-08!12;UBERON:0000483!3.25e-08!309;UBERON:0000119!4.37e-08!312;UBERON:0004732!1.00e-07!13;UBERON:0000475!1.08e-07!365;UBERON:0002022!1.18e-07!1;UBERON:0003112!1.51e-07!1;UBERON:0000032!1.51e-07!1;UBERON:0005253!1.51e-07!1;UBERON:0003128!1.51e-07!1;UBERON:0002241!1.51e-07!1;UBERON:0001703!1.51e-07!1;UBERON:0004761!1.51e-07!1;UBERON:0009617!1.51e-07!1;UBERON:0001874!1.72e-07!1;UBERON:0002902!2.21e-07!1;UBERON:0009899!2.21e-07!1;UBERON:0002581!2.50e-07!1;UBERON:0001882!2.83e-07!1;UBERON:0005403!2.83e-07!1;UBERON:0007190!3.84e-07!1;UBERON:0000481!8.99e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.83e-66;6!UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0004733;5.97e-34;12!UBERON:0002028;5.97e-34;12!UBERON:0004732;1.86e-31;13!UBERON:0000073;3.42e-07;53!UBERON:0002616;3.42e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.83e-66,6;UBERON:0006215,2.83e-66,6;UBERON:0002680,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p@chr17:2679600..2679618,+ | |short_description=p@chr17:2679600..2679618,+ | ||
}} | }} |
Latest revision as of 14:58, 25 July 2015
Short description: | p@chr17:2679600..2679618, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:2679600..2679618, + |
Coexpression cluster: | C755_cerebellum_parietal_temporal_occipital_duodenum_brain_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.83e-66 | 6 |
rhombic lip | 2.83e-66 | 6 |
regional part of metencephalon | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |