FFCP PHASE1:Hg19::chr17:39672442..39672463,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39672442..39672463,+ | |||
|coexpression_cluster_id=C441 | |coexpression_cluster_id=C441 | ||
|description=CAGE_peak_at_chr17:39672442..39672463,+ | |description=CAGE_peak_at_chr17:39672442..39672463,+ | ||
|id=chr17:39672442..39672463,+ | |id=chr17:39672442..39672463,+ | ||
|ontology_enrichment_celltype=CL:0002076!6.88e-19!43;CL:0002251!5.10e-16!21;CL:0000223!1.56e-14!59;CL:0002621!2.39e-12!3;CL:0002327!7.64e-10!4;CL:0000575!3.65e-09!2;CL:0000066!6.35e-07!254 | |ontology_enrichment_celltype=CL:0002076!6.88e-19!43;CL:0002251!5.10e-16!21;CL:0000223!1.56e-14!59;CL:0002621!2.39e-12!3;CL:0002327!7.64e-10!4;CL:0000575!3.65e-09!2;CL:0000066!6.35e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000575;3.70e-11;2!CL:0002231;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,3.02e-11,2;CL:0002231,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.12e-21;1!UBERON:0008814;3.70e-11;2!UBERON:0010056;3.70e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;1.53e-21;1!DOID:3149;1.53e-21;1!DOID:3451;1.82e-11;2!DOID:4159;1.82e-11;2!DOID:0060122;1.82e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.53e-21,1;DOID:3149,1.53e-21,1;DOID:3451,1.82e-11,2;DOID:4159,1.82e-11,2;DOID:0060122,1.82e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000974!3.05e-17!10;UBERON:0000166!1.80e-16!21;UBERON:0000165!3.07e-14!28;UBERON:0000930!3.07e-14!28;UBERON:0000161!2.25e-13!35;UBERON:0001004!1.16e-12!72;UBERON:0001949!2.39e-12!3;UBERON:0003729!4.05e-12!5;UBERON:0006562!1.48e-11!11;UBERON:0001444!1.19e-10!48;UBERON:0000344!1.77e-10!12;UBERON:0003102!5.74e-10!95;UBERON:0001911!7.64e-10!4;UBERON:0005333!7.64e-10!4;UBERON:0008425!7.64e-10!4;UBERON:0005311!7.64e-10!4;UBERON:0003343!3.59e-09!4;UBERON:0004785!3.59e-09!4;UBERON:0001042!3.91e-09!10;UBERON:0009145!3.91e-09!10;UBERON:0004119!1.20e-08!169;UBERON:0000925!1.20e-08!169;UBERON:0006595!1.20e-08!169;UBERON:0000341!1.54e-08!2;UBERON:0003127!2.24e-08!2;UBERON:0001007!4.39e-08!155;UBERON:0001555!4.39e-08!155;UBERON:0007026!4.39e-08!155 | |ontology_enrichment_uberon=UBERON:0000974!3.05e-17!10;UBERON:0000166!1.80e-16!21;UBERON:0000165!3.07e-14!28;UBERON:0000930!3.07e-14!28;UBERON:0000161!2.25e-13!35;UBERON:0001004!1.16e-12!72;UBERON:0001949!2.39e-12!3;UBERON:0003729!4.05e-12!5;UBERON:0006562!1.48e-11!11;UBERON:0001444!1.19e-10!48;UBERON:0000344!1.77e-10!12;UBERON:0003102!5.74e-10!95;UBERON:0001911!7.64e-10!4;UBERON:0005333!7.64e-10!4;UBERON:0008425!7.64e-10!4;UBERON:0005311!7.64e-10!4;UBERON:0003343!3.59e-09!4;UBERON:0004785!3.59e-09!4;UBERON:0001042!3.91e-09!10;UBERON:0009145!3.91e-09!10;UBERON:0004119!1.20e-08!169;UBERON:0000925!1.20e-08!169;UBERON:0006595!1.20e-08!169;UBERON:0000341!1.54e-08!2;UBERON:0003127!2.24e-08!2;UBERON:0001007!4.39e-08!155;UBERON:0001555!4.39e-08!155;UBERON:0007026!4.39e-08!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;4.65e-27;3!UBERON:0001033;4.65e-27;3!UBERON:0000997;6.31e-21;1!UBERON:0005056;6.31e-21;1!UBERON:0004176;6.31e-21;1!UBERON:0000020;2.49e-08;23!UBERON:0001032;5.23e-08;24!UBERON:0004456;5.23e-08;24!UBERON:0001043;5.73e-08;3!UBERON:0000165;5.41e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.65e-27,3;UBERON:0001033,4.65e-27,3;UBERON:0010056,4.65e-27,3;UBERON:0000997,6.31e-21,1;UBERON:0005056,6.31e-21,1;UBERON:0000161,3.97e-09,36;UBERON:0001042,7.96e-09,10;UBERON:0009145,7.96e-09,10;UBERON:0000166,9.68e-09,22;UBERON:0006562,4.18e-08,11;UBERON:0000020,4.98e-08,24;UBERON:0001032,4.98e-08,24;UBERON:0004456,4.98e-08,24;UBERON:0001043,5.54e-08,3;UBERON:0009143,5.54e-08,3;UBERON:0003102,4.13e-07,99;UBERON:0001444,8.24e-07,49;UBERON:0000165,9.13e-07,29;UBERON:0000930,9.13e-07,29 | |||
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| ||
|short_description=p@chr17:39672442..39672463,+ | |short_description=p@chr17:39672442..39672463,+ | ||
}} | }} |
Latest revision as of 16:42, 25 July 2015
Short description: | p@chr17:39672442..39672463, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39672442..39672463, + |
Coexpression cluster: | C441_keratoacanthoma_skin_tongue_esophagus_cervical_salivary_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 3.02e-11 | 2 |
epithelial cell of prostate | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 4.65e-27 | 3 |
gustatory system | 4.65e-27 | 3 |
future tongue | 4.65e-27 | 3 |
mammalian vulva | 6.31e-21 | 1 |
external female genitalia | 6.31e-21 | 1 |
orifice | 3.97e-09 | 36 |
chordate pharynx | 7.96e-09 | 10 |
pharyngeal region of foregut | 7.96e-09 | 10 |
oral opening | 9.68e-09 | 22 |
pharynx | 4.18e-08 | 11 |
sense organ | 4.98e-08 | 24 |
sensory system | 4.98e-08 | 24 |
entire sense organ system | 4.98e-08 | 24 |
esophagus | 5.54e-08 | 3 |
esophageal region | 5.54e-08 | 3 |
surface structure | 4.13e-07 | 99 |
subdivision of head | 8.24e-07 | 49 |
mouth | 9.13e-07 | 29 |
stomodeum | 9.13e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.53e-21 | 1 |
keratoacanthoma | 1.53e-21 | 1 |
skin carcinoma | 1.82e-11 | 2 |
skin cancer | 1.82e-11 | 2 |
integumentary system cancer | 1.82e-11 | 2 |