FFCP PHASE1:Hg19::chr17:39812242..39812247,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39812242..39812247,+ | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_at_chr17:39812242..39812247,+ | |description=CAGE_peak_at_chr17:39812242..39812247,+ | ||
|id=chr17:39812242..39812247,+ | |id=chr17:39812242..39812247,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.76e-20!43;CL:0002368!9.37e-16!13;CL:0000223!5.98e-15!59;CL:0000066!1.55e-13!254;CL:0002202!1.66e-10!9;CL:0002632!1.66e-10!9;CL:0000622!5.48e-10!5;CL:0002623!7.74e-10!3;CL:0002328!4.47e-09!3;CL:0000154!2.62e-08!6;CL:0000240!1.44e-07!6;CL:0000311!1.44e-07!6;CL:0000079!1.44e-07!6;CL:0000237!1.44e-07!6;CL:0000036!1.44e-07!6;CL:0000357!1.44e-07!6;CL:0000114!1.44e-07!6;CL:0000244!1.45e-07!4;CL:0000731!1.45e-07!4;CL:0002159!2.46e-07!13;CL:0002251!4.04e-07!21;CL:0000575!5.91e-07!2 | |ontology_enrichment_celltype=CL:0002076!2.76e-20!43;CL:0002368!9.37e-16!13;CL:0000223!5.98e-15!59;CL:0000066!1.55e-13!254;CL:0002202!1.66e-10!9;CL:0002632!1.66e-10!9;CL:0000622!5.48e-10!5;CL:0002623!7.74e-10!3;CL:0002328!4.47e-09!3;CL:0000154!2.62e-08!6;CL:0000240!1.44e-07!6;CL:0000311!1.44e-07!6;CL:0000079!1.44e-07!6;CL:0000237!1.44e-07!6;CL:0000036!1.44e-07!6;CL:0000357!1.44e-07!6;CL:0000114!1.44e-07!6;CL:0000244!1.45e-07!4;CL:0000731!1.45e-07!4;CL:0002159!2.46e-07!13;CL:0002251!4.04e-07!21;CL:0000575!5.91e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000622;4.10e-28;5!CL:0002623;7.50e-27;3!CL:0000154;1.75e-23;6!CL:0000244;2.89e-20;4!CL:0000731;2.89e-20;4!CL:0000575;3.15e-18;2!CL:0000150;9.50e-16;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.02e-27,5;CL:0002623,1.74e-26,3;CL:0000154,3.73e-23,6;CL:0000244,2.23e-20,4;CL:0000731,2.23e-20,4;CL:0000575,8.24e-18,2;CL:0000150,1.57e-15,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.06e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;5.53e-10;1!DOID:3149;5.53e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.85e-10,1;DOID:3149,4.85e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.45e-17!72;UBERON:0004119!1.17e-16!169;UBERON:0000925!1.17e-16!169;UBERON:0006595!1.17e-16!169;UBERON:0000065!6.06e-14!53;UBERON:0000072!2.12e-11!46;UBERON:0007196!2.63e-11!14;UBERON:0001558!2.63e-11!14;UBERON:0000077!3.13e-11!130;UBERON:0001007!2.16e-10!155;UBERON:0001555!2.16e-10!155;UBERON:0007026!2.16e-10!155;UBERON:0004921!3.49e-10!129;UBERON:0004185!3.49e-10!129;UBERON:0003408!5.18e-10!10;UBERON:0000166!1.69e-09!21;UBERON:0001041!4.28e-09!98;UBERON:0004815!4.47e-09!3;UBERON:0002031!4.47e-09!3;UBERON:0000161!4.91e-09!35;UBERON:0006562!5.06e-09!11;UBERON:0000165!2.80e-08!28;UBERON:0000930!2.80e-08!28;UBERON:0001044!3.87e-08!6;UBERON:0003293!3.87e-08!6;UBERON:0003294!3.87e-08!6;UBERON:0010047!3.87e-08!6;UBERON:0000167!3.87e-08!6;UBERON:0001557!4.06e-08!19;UBERON:0003102!7.94e-08!95;UBERON:0001042!2.75e-07!10;UBERON:0009145!2.75e-07!10;UBERON:0000078!2.95e-07!18;UBERON:0002185!6.82e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.45e-16;5!UBERON:0001044;9.67e-14;6!UBERON:0003293;9.67e-14;6!UBERON:0003294;9.67e-14;6!UBERON:0010047;9.67e-14;6!UBERON:0003408;9.67e-14;6!UBERON:0000167;9.67e-14;6!UBERON:0005910;1.03e-13;6!UBERON:0001723;8.56e-13;3!UBERON:0001033;8.56e-13;3!UBERON:0000165;7.81e-11;28!UBERON:0001041;2.60e-10;14!UBERON:0002372;5.53e-10;1!UBERON:0007029;5.53e-10;1!UBERON:0001961;5.53e-10;1!UBERON:0001744;5.53e-10;1!UBERON:0001042;5.53e-10;1!UBERON:0001735;5.53e-10;1!UBERON:0000014;1.39e-09;4!UBERON:0000964;1.39e-09;4!UBERON:0010409;1.39e-09;4!UBERON:0007811;3.63e-08;52!UBERON:0000153;4.94e-08;54!UBERON:0000033;8.15e-08;50!UBERON:0000161;1.50e-07;19!UBERON:0000166;1.50e-07;19!UBERON:0000486;4.17e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.99e-16,5;UBERON:0000166,7.11e-14,22;UBERON:0005910,8.70e-14,6;UBERON:0001044,1.46e-13,6;UBERON:0003293,1.46e-13,6;UBERON:0003294,1.46e-13,6;UBERON:0010047,1.46e-13,6;UBERON:0000167,1.46e-13,6;UBERON:0001723,7.41e-13,3;UBERON:0001033,7.41e-13,3;UBERON:0010056,7.41e-13,3;UBERON:0000161,4.25e-11,36;UBERON:0003102,1.45e-10,99;UBERON:0000165,2.04e-10,29;UBERON:0000930,2.04e-10,29;UBERON:0007029,2.59e-10,1;UBERON:0001444,2.75e-10,49;UBERON:0002372,4.06e-10,1;UBERON:0001961,4.06e-10,1;UBERON:0001744,4.06e-10,1;UBERON:0001735,4.06e-10,1;UBERON:0000153,4.73e-10,62;UBERON:0007811,4.73e-10,62;UBERON:0000014,9.02e-10,4;UBERON:0000964,2.24e-09,4;UBERON:0010409,2.24e-09,4;UBERON:0004348,2.24e-09,4;UBERON:0005427,2.24e-09,4;UBERON:0000033,7.12e-09,56;UBERON:0001042,1.56e-08,10;UBERON:0009145,1.56e-08,10;UBERON:0003408,2.40e-08,10;UBERON:0006562,8.43e-08,11;UBERON:0004119,6.48e-07,160;UBERON:0000925,6.48e-07,160;UBERON:0006595,6.48e-07,160 | |||
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| ||
|short_description=p@chr17:39812242..39812247,+ | |short_description=p@chr17:39812242..39812247,+ | ||
}} | }} |
Latest revision as of 16:47, 25 July 2015
Short description: | p@chr17:39812242..39812247, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39812242..39812247, + |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.02e-27 | 5 |
acinar cell of salivary gland | 1.74e-26 | 3 |
protein secreting cell | 3.73e-23 | 6 |
transitional epithelial cell | 2.23e-20 | 4 |
urothelial cell | 2.23e-20 | 4 |
corneal epithelial cell | 8.24e-18 | 2 |
glandular epithelial cell | 1.57e-15 | 9 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.99e-16 | 5 |
oral opening | 7.11e-14 | 22 |
transitional epithelium | 8.70e-14 | 6 |
saliva-secreting gland | 1.46e-13 | 6 |
gland of oral region | 1.46e-13 | 6 |
gland of foregut | 1.46e-13 | 6 |
oral gland | 1.46e-13 | 6 |
oral cavity | 1.46e-13 | 6 |
tongue | 7.41e-13 | 3 |
gustatory system | 7.41e-13 | 3 |
future tongue | 7.41e-13 | 3 |
orifice | 4.25e-11 | 36 |
surface structure | 1.45e-10 | 99 |
mouth | 2.04e-10 | 29 |
stomodeum | 2.04e-10 | 29 |
surface | 2.59e-10 | 1 |
subdivision of head | 2.75e-10 | 49 |
tonsil | 4.06e-10 | 1 |
mucosa-associated lymphoid tissue | 4.06e-10 | 1 |
lymphoid tissue | 4.06e-10 | 1 |
tonsillar ring | 4.06e-10 | 1 |
anterior region of body | 4.73e-10 | 62 |
craniocervical region | 4.73e-10 | 62 |
zone of skin | 9.02e-10 | 4 |
cornea | 2.24e-09 | 4 |
eye surface | 2.24e-09 | 4 |
optic eminence | 2.24e-09 | 4 |
corneal primordium | 2.24e-09 | 4 |
head | 7.12e-09 | 56 |
chordate pharynx | 1.56e-08 | 10 |
pharyngeal region of foregut | 1.56e-08 | 10 |
gland of gut | 2.40e-08 | 10 |
pharynx | 8.43e-08 | 11 |
endoderm-derived structure | 6.48e-07 | 160 |
endoderm | 6.48e-07 | 160 |
presumptive endoderm | 6.48e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.85e-10 | 1 |
keratoacanthoma | 4.85e-10 | 1 |