FFCP PHASE1:Hg19::chr17:48264032..48264093,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48264032..48264093,+ | |||
|coexpression_cluster_id=C59 | |coexpression_cluster_id=C59 | ||
|description=CAGE_peak_at_chr17:48264032..48264093,+ | |description=CAGE_peak_at_chr17:48264032..48264093,+ | ||
|id=chr17:48264032..48264093,+ | |id=chr17:48264032..48264093,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.38e-38!180;CL:0000057!3.19e-26!75;CL:0000183!5.63e-14!59;CL:0000680!2.82e-13!57;CL:0000056!2.82e-13!57;CL:0000355!2.82e-13!57;CL:0000187!1.34e-12!54;CL:0000048!2.14e-11!430;CL:0000723!8.87e-11!436;CL:0000034!1.93e-10!444;CL:0000393!1.99e-10!60;CL:0000211!1.99e-10!60;CL:0002371!2.08e-10!591;CL:0000144!3.54e-10!625;CL:0000192!5.47e-10!42;CL:0000514!5.47e-10!42;CL:0002620!5.63e-09!23;CL:0002334!2.78e-08!12 | |ontology_enrichment_celltype=CL:0000055!9.38e-38!180;CL:0000057!3.19e-26!75;CL:0000183!5.63e-14!59;CL:0000680!2.82e-13!57;CL:0000056!2.82e-13!57;CL:0000355!2.82e-13!57;CL:0000187!1.34e-12!54;CL:0000048!2.14e-11!430;CL:0000723!8.87e-11!436;CL:0000034!1.93e-10!444;CL:0000393!1.99e-10!60;CL:0000211!1.99e-10!60;CL:0002371!2.08e-10!591;CL:0000144!3.54e-10!625;CL:0000192!5.47e-10!42;CL:0000514!5.47e-10!42;CL:0002620!5.63e-09!23;CL:0002334!2.78e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.76e-12;55!CL:0000048;1.05e-10;58!CL:0000723;1.32e-10;61!CL:0002320;1.86e-09;188!CL:0002334;4.71e-09;12!CL:0000034;1.15e-08;69!CL:0000057;1.60e-08;73!CL:0000499;3.58e-08;28!CL:0002570;7.98e-08;8!CL:0002620;1.37e-07;23!CL:0002569;3.48e-07;6!CL:0000349;6.94e-07;19!CL:0000327;8.85e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.64e-21,76;CL:0000048,2.97e-16,427;CL:0000723,2.02e-15,433;CL:0000034,2.34e-14,441;CL:0002320,2.13e-11,361;CL:0000680,5.93e-10,58;CL:0000056,5.93e-10,58;CL:0000355,5.93e-10,58;CL:0000187,1.14e-09,55;CL:0000134,3.67e-09,354;CL:0002334,4.30e-09,12;CL:0000499,3.95e-08,28;CL:0002570,7.39e-08,8;CL:0000393,8.32e-08,61;CL:0000211,8.32e-08,61;CL:0002620,1.24e-07,23;CL:0000219,1.53e-07,386;CL:0002569,3.65e-07,6;CL:0000192,5.50e-07,43;CL:0000514,5.50e-07,43;CL:0000349,8.30e-07,19;CL:0000327,8.85e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.15e-16!83;UBERON:0002329!1.15e-16!83;UBERON:0003077!1.15e-16!83;UBERON:0003059!1.15e-16!83;UBERON:0007282!1.15e-16!83;UBERON:0009618!1.15e-16!83;UBERON:0007285!1.15e-16!83;UBERON:0004290!4.56e-14!70;UBERON:0001134!4.58e-14!61;UBERON:0002036!4.58e-14!61;UBERON:0003082!4.58e-14!61;UBERON:0002385!1.17e-13!63;UBERON:0001015!1.17e-13!63;UBERON:0000383!1.17e-13!63;UBERON:0000486!6.33e-12!82;UBERON:0005256!8.42e-12!143;UBERON:0000475!3.87e-08!365;UBERON:0003102!1.02e-07!95;UBERON:0002199!2.48e-07!45;UBERON:0002416!2.48e-07!45;UBERON:0002100!3.22e-07!216;UBERON:0001013!9.20e-07!14 | |ontology_enrichment_uberon=UBERON:0000914!1.15e-16!83;UBERON:0002329!1.15e-16!83;UBERON:0003077!1.15e-16!83;UBERON:0003059!1.15e-16!83;UBERON:0007282!1.15e-16!83;UBERON:0009618!1.15e-16!83;UBERON:0007285!1.15e-16!83;UBERON:0004290!4.56e-14!70;UBERON:0001134!4.58e-14!61;UBERON:0002036!4.58e-14!61;UBERON:0003082!4.58e-14!61;UBERON:0002385!1.17e-13!63;UBERON:0001015!1.17e-13!63;UBERON:0000383!1.17e-13!63;UBERON:0000486!6.33e-12!82;UBERON:0005256!8.42e-12!143;UBERON:0000475!3.87e-08!365;UBERON:0003102!1.02e-07!95;UBERON:0002199!2.48e-07!45;UBERON:0002416!2.48e-07!45;UBERON:0002100!3.22e-07!216;UBERON:0001013!9.20e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;8.73e-10;198!UBERON:0001013;1.05e-08;14!UBERON:0003104;3.25e-08;7!UBERON:0009142;3.25e-08;7!UBERON:0003422;3.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.56e-11,371;UBERON:0001134,1.41e-10,62;UBERON:0002036,1.41e-10,62;UBERON:0003082,1.41e-10,62;UBERON:0007524,3.29e-10,73;UBERON:0002385,6.58e-10,64;UBERON:0001015,6.58e-10,64;UBERON:0000383,6.58e-10,64;UBERON:0002329,6.63e-10,71;UBERON:0003059,6.63e-10,71;UBERON:0007282,6.63e-10,71;UBERON:0004290,6.63e-10,71;UBERON:0009618,6.63e-10,71;UBERON:0007503,8.09e-10,78;UBERON:0003077,1.31e-09,72;UBERON:0007285,1.31e-09,72;UBERON:0001013,1.22e-08,14;UBERON:0000486,2.89e-08,83;UBERON:0003104,3.72e-08,160;UBERON:0009142,3.72e-08,160;UBERON:0005256,2.12e-07,122;UBERON:0002199,2.50e-07,46;UBERON:0002416,2.50e-07,46;UBERON:0003422,3.65e-07,6 | |||
|phase1_expression=4.72363786103447,7.70761886007539,5.92008497203079,7.00513088471913,9.83314407740033,6.10636966870258,15.1979926900986,0,1.04474251279935,0.491467873003018,0,1.31064823278103,8.44054330331051,4.45558870656168,3.64537113300707,1.34465029290355,0.602694528023977,2.92124036154949,0.975865597581014,2.09305798730539,6.9360235023046,7.8363680369522,0,0.547497700291537,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70700859703636,9.58969213826478,14.4575660953827,3.00802746381534,9.84956328933601,0,10.2193322763554,0.567208902984407,2.4390233720882,1.84453049955565,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,17.3940183093361,3.67228483827281,2.91300197789081,18.0707071071753,6.73869926176878,7.28880880184999,1.06748995729705,18.7467336797042,0.933633106199299,1.88594940897563,0.653847612453835,4.08665054641315,0.576175924479999,0.937285727335186,0,0,2.83952493048422,0.587172493218824,0.161872944368132,0.140450806702248,1.22492502752936,0.859840221182376,0.826606249406124,10.6920257155385,17.5559519787775,0.910161361938026,11.4978902690598,0.336672227908132,0.750711119231785,0,1.75591048352335,7.35570709917647,4.6573798261045,3.74326204428069,11.1221574127094,9.39652510801697,6.99375273826554,18.0054657650641,2.78241828943785,8.50213782150576,6.51408997160564,11.4767905924061,3.70260619612555,10.6022185182528,3.68199594569197,4.0411514204703,14.5553932931812,1.61203357164224,3.05209066158878,0.193260853163297,0.272746120590835,0,0,0,0.464775771478074,0.207322110030741,0.252320850875628,0,0,8.36213219650751,1.38134921352481,3.71494342425583,7.21879481669586,0,0,0,0.110293972732394,0,0,0,0,0,0,2.80483547606892,13.5819423739362,17.641045366265,0,0,0,0,0,2.91665277507493,0.219500570817251,0,0,0,0.651616610620649,4.15973914111831,0,1.15930404975077,1.40890433082986,0,0,0,0,0,0,0,0,0,1.34385702559088,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0,0.672786506072164,3.48768055066624,1.7601188597028,4.26596662000667,17.8828222925941,9.298330278116,6.38251479803689,8.32059495290929,2.05765899409714,4.25547396069835,2.1313774321288,15.2986453214218,30.9294315073123,12.3486050517115,4.88604276440603,11.727934308504,7.12756685640086,1.20575750823834,0.871533458600294,0.899756920638513,0,0,0,11.7416179190875,21.8237678084816,0,1.44781306667579,1.43833425785268,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0.502548796003046,0,0,0,0,3.18997878469764,7.00238729483548,3.52644530809656,55.5282200287255,52.8149806839599,37.8485796081443,3.98280810975225,0.601892199455438,0,11.3820378421755,8.63493278096067,2.58116835958384,1.56390506042549,6.2656370388077,16.4708843429211,0,0,0,1.21251028578504,9.98612637062982,12.0956117331872,3.96972492510043,11.3561860233166,19.6462066103152,8.84160129864337,0.511707249066704,21.8761332755306,11.8734453155993,3.85524234506639,10.2985800681614,2.05317890034523,3.63478100428535,5.694308544538,0,0.200506470303285,0,4.13332013392584,6.00900854422166,6.03172308813351,0,0,0,0,0.105551628892876,0,0,0.215915916102139,1.54227252690289,1.89662506280697,4.01351819083883,0,0,0,0,0,0,0.656029291399411,0,0,1.55668090191184,1.98022799809411,0,0.650060246036521,6.42735719376638,1.16004861950546,1.3864375540318,1.5350367472613,0.827019434907183,2.90034661144339,2.46528379654188,1.02271952899321,15.8477023451192,0.165284915360978,0.384380134730212,0,0,4.18360994367557,19.5183655034997,0,4.92853728281742,0,0,0.74129687641568,0,2.232950216158,2.21465597303108,7.81583795087682,5.11795582622668,0.42793898803392,0.95460974377781,0.78494864019923,2.87795932133304,6.03981465419321,3.65218447271628,0,1.58510321173008,1.68503382495592,6.82687234725426,4.38684281336312,0,5.59649636772742,9.61556937285247,3.39024349860728,1.65409603063837,1.99031692572366,0.876901770507525,2.31510213706675,4.59126326432643,0,0.6196469961995,1.12678241012897,3.29846110069318,7.46692711699721,0.35667105148125,0.709522128141196,7.38876723541824,9.54955189583715,1.89736586882858,2.79947776195986,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.996239941255349,0,0,0.102268682502155,0,3.11039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15425387755696,0.113942055847001,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,18.4592858878721,0,0,0,0,0.394584402849391,2.41981432097328,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.51595809741485,0,0.0730893170861856,0,0,0,22.8240548188338,0,0,0,0,0.160317640503067,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0.577901179803038,0,0,0,3.008358089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| ||
|short_description=p@chr17:48264032..48264093,+ | |short_description=p@chr17:48264032..48264093,+ | ||
}} | }} |
Latest revision as of 18:32, 25 July 2015
Short description: | p@chr17:48264032..48264093, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48264032..48264093, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.64e-21 | 76 |
multi fate stem cell | 2.97e-16 | 427 |
somatic stem cell | 2.02e-15 | 433 |
stem cell | 2.34e-14 | 441 |
connective tissue cell | 2.13e-11 | 361 |
muscle precursor cell | 5.93e-10 | 58 |
myoblast | 5.93e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.93e-10 | 58 |
muscle cell | 1.14e-09 | 55 |
mesenchymal cell | 3.67e-09 | 354 |
preadipocyte | 4.30e-09 | 12 |
stromal cell | 3.95e-08 | 28 |
mesenchymal stem cell of adipose | 7.39e-08 | 8 |
electrically responsive cell | 8.32e-08 | 61 |
electrically active cell | 8.32e-08 | 61 |
skin fibroblast | 1.24e-07 | 23 |
motile cell | 1.53e-07 | 386 |
mesenchymal stem cell of umbilical cord | 3.65e-07 | 6 |
smooth muscle cell | 5.50e-07 | 43 |
smooth muscle myoblast | 5.50e-07 | 43 |
extraembryonic cell | 8.30e-07 | 19 |
extracellular matrix secreting cell | 8.85e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.56e-11 | 371 |
skeletal muscle tissue | 1.41e-10 | 62 |
striated muscle tissue | 1.41e-10 | 62 |
myotome | 1.41e-10 | 62 |
dense mesenchyme tissue | 3.29e-10 | 73 |
muscle tissue | 6.58e-10 | 64 |
musculature | 6.58e-10 | 64 |
musculature of body | 6.58e-10 | 64 |
somite | 6.63e-10 | 71 |
presomitic mesoderm | 6.63e-10 | 71 |
presumptive segmental plate | 6.63e-10 | 71 |
dermomyotome | 6.63e-10 | 71 |
trunk paraxial mesoderm | 6.63e-10 | 71 |
epithelial vesicle | 8.09e-10 | 78 |
paraxial mesoderm | 1.31e-09 | 72 |
presumptive paraxial mesoderm | 1.31e-09 | 72 |
adipose tissue | 1.22e-08 | 14 |
multilaminar epithelium | 2.89e-08 | 83 |
mesenchyme | 3.72e-08 | 160 |
entire embryonic mesenchyme | 3.72e-08 | 160 |
trunk mesenchyme | 2.12e-07 | 122 |
integument | 2.50e-07 | 46 |
integumental system | 2.50e-07 | 46 |
mesenchyme of umbilical cord | 3.65e-07 | 6 |