FFCP PHASE1:Hg19::chr17:49450091..49450110,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:49450091..49450110,- | |||
|description=CAGE_peak_at_chr17:49450091..49450110,- | |description=CAGE_peak_at_chr17:49450091..49450110,- | ||
|id=chr17:49450091..49450110,- | |id=chr17:49450091..49450110,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.55e-18;24!CL:0000817;1.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.54e-18,24;CL:0000826,5.54e-18,24;CL:0000838,1.03e-09,52;CL:0000542,1.67e-09,53;CL:0000051,1.67e-09,53 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.97e-08;1 | |||
|ontology_enrichment_disease=DOID:14566!1.43e-07!239;DOID:162!2.36e-07!235 | |ontology_enrichment_disease=DOID:14566!1.43e-07!239;DOID:162!2.36e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.50e-11;10!DOID:4960;6.25e-09;1!DOID:0070004;6.25e-09;1!DOID:0060085;1.97e-08;1!DOID:3165;1.97e-08;1!DOID:0060121;1.97e-08;1!DOID:2438;1.97e-08;1!DOID:4418;1.97e-08;1!DOID:2355;1.97e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.64e-11,10;DOID:4960,5.59e-09,1;DOID:0070004,5.59e-09,1;DOID:0060085,1.10e-08,1;DOID:3165,1.10e-08,1;DOID:0060121,1.10e-08,1;DOID:2438,1.10e-08,1;DOID:4418,1.10e-08,1;DOID:2355,3.28e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000955!3.88e-11!69;UBERON:0006238!3.88e-11!69;UBERON:0001049!6.10e-11!57;UBERON:0005068!6.10e-11!57;UBERON:0006241!6.10e-11!57;UBERON:0007135!6.10e-11!57;UBERON:0002780!1.13e-10!41;UBERON:0001890!1.13e-10!41;UBERON:0006240!1.13e-10!41;UBERON:0003080!2.98e-10!42;UBERON:0002616!3.30e-10!59;UBERON:0000073!6.79e-10!94;UBERON:0001016!6.79e-10!94;UBERON:0001017!3.13e-09!82;UBERON:0002020!4.69e-09!34;UBERON:0003528!4.69e-09!34;UBERON:0001893!5.45e-09!34;UBERON:0002791!2.03e-08!33;UBERON:0005743!2.41e-08!86;UBERON:0002308!1.02e-07!9;UBERON:0000125!1.02e-07!9;UBERON:0001869!1.81e-07!32;UBERON:0000033!4.78e-07!123;UBERON:0000200!9.98e-07!6 | |ontology_enrichment_uberon=UBERON:0000955!3.88e-11!69;UBERON:0006238!3.88e-11!69;UBERON:0001049!6.10e-11!57;UBERON:0005068!6.10e-11!57;UBERON:0006241!6.10e-11!57;UBERON:0007135!6.10e-11!57;UBERON:0002780!1.13e-10!41;UBERON:0001890!1.13e-10!41;UBERON:0006240!1.13e-10!41;UBERON:0003080!2.98e-10!42;UBERON:0002616!3.30e-10!59;UBERON:0000073!6.79e-10!94;UBERON:0001016!6.79e-10!94;UBERON:0001017!3.13e-09!82;UBERON:0002020!4.69e-09!34;UBERON:0003528!4.69e-09!34;UBERON:0001893!5.45e-09!34;UBERON:0002791!2.03e-08!33;UBERON:0005743!2.41e-08!86;UBERON:0002308!1.02e-07!9;UBERON:0000125!1.02e-07!9;UBERON:0001869!1.81e-07!32;UBERON:0000033!4.78e-07!123;UBERON:0000200!9.98e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0005162;3.70e-15;2!UBERON:0000122;3.70e-15;2!UBERON:0007195;6.25e-09;1!UBERON:0002336;1.97e-08;1!UBERON:0000941;1.97e-08;1!UBERON:0001785;1.97e-08;1!UBERON:0002464;1.97e-08;1!UBERON:0004904;1.97e-08;1!UBERON:0011215;1.97e-08;1!UBERON:0001018;1.97e-08;1!UBERON:0001021;1.97e-08;1!UBERON:0002473;1.97e-08;1!UBERON:0005340;1.97e-08;1!UBERON:0003544;1.97e-08;1!UBERON:0005970;1.97e-08;1!UBERON:0002316;1.97e-08;1!UBERON:0001020;1.97e-08;1!UBERON:0002437;1.97e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,7.60e-15,2;UBERON:0000122,7.60e-15,2;UBERON:0007195,6.50e-09,1;UBERON:0000941,1.98e-08,1;UBERON:0001785,1.98e-08,1;UBERON:0002464,1.98e-08,1;UBERON:0004904,1.98e-08,1;UBERON:0001021,1.98e-08,1;UBERON:0003902,1.98e-08,1;UBERON:0005425,1.98e-08,1;UBERON:0002336,4.07e-08,1;UBERON:0011215,4.07e-08,1;UBERON:0001018,4.07e-08,1;UBERON:0002473,4.07e-08,1;UBERON:0005340,4.07e-08,1;UBERON:0003544,4.07e-08,1;UBERON:0005970,4.07e-08,1;UBERON:0002316,4.07e-08,1;UBERON:0001020,4.07e-08,1;UBERON:0002437,4.07e-08,1 | |||
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| ||
|short_description=p@chr17:49450091..49450110,- | |short_description=p@chr17:49450091..49450110,- | ||
}} | }} |
Latest revision as of 18:55, 25 July 2015
Short description: | p@chr17:49450091..49450110, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:49450091..49450110, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.54e-18 | 24 |
pro-B cell | 5.54e-18 | 24 |
lymphoid lineage restricted progenitor cell | 1.03e-09 | 52 |
lymphocyte | 1.67e-09 | 53 |
common lymphoid progenitor | 1.67e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 7.60e-15 | 2 |
neuron projection bundle | 7.60e-15 | 2 |
stroma of bone marrow | 6.50e-09 | 1 |
cranial nerve II | 1.98e-08 | 1 |
cranial nerve | 1.98e-08 | 1 |
nerve trunk | 1.98e-08 | 1 |
nerve connecting eye with brain | 1.98e-08 | 1 |
nerve | 1.98e-08 | 1 |
retinal neural layer | 1.98e-08 | 1 |
presumptive neural retina | 1.98e-08 | 1 |
corpus callosum | 4.07e-08 | 1 |
central nervous system cell part cluster | 4.07e-08 | 1 |
axon tract | 4.07e-08 | 1 |
intercerebral commissure | 4.07e-08 | 1 |
dorsal telencephalic commissure | 4.07e-08 | 1 |
brain white matter | 4.07e-08 | 1 |
brain commissure | 4.07e-08 | 1 |
white matter | 4.07e-08 | 1 |
nervous system commissure | 4.07e-08 | 1 |
cerebral hemisphere white matter | 4.07e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.64e-11 | 10 |
bone marrow cancer | 5.59e-09 | 1 |
myeloma | 5.59e-09 | 1 |
organ system benign neoplasm | 1.10e-08 | 1 |
skin benign neoplasm | 1.10e-08 | 1 |
integumentary system benign neoplasm | 1.10e-08 | 1 |
dermis tumor | 1.10e-08 | 1 |
cutaneous fibrous histiocytoma | 1.10e-08 | 1 |
anemia | 3.28e-08 | 1 |