FFCP PHASE1:Hg19::chr17:73747066..73747079,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:73747066..73747079,+ | |||
|coexpression_cluster_id=C436 | |coexpression_cluster_id=C436 | ||
|description=CAGE_peak_at_chr17:73747066..73747079,+ | |description=CAGE_peak_at_chr17:73747066..73747079,+ | ||
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|ontology_enrichment_celltype=CL:0002076!3.93e-27!43;CL:0000066!7.24e-27!254;CL:0000223!2.10e-20!59;CL:0002251!2.69e-13!21;CL:0002368!2.43e-12!13;CL:0002159!9.76e-11!13;CL:0000622!4.74e-10!5;CL:0000244!1.17e-08!4;CL:0000731!1.17e-08!4;CL:0000154!2.95e-08!6;CL:0002077!3.20e-07!33;CL:0000150!4.16e-07!9;CL:0000076!6.55e-07!62 | |ontology_enrichment_celltype=CL:0002076!3.93e-27!43;CL:0000066!7.24e-27!254;CL:0000223!2.10e-20!59;CL:0002251!2.69e-13!21;CL:0002368!2.43e-12!13;CL:0002159!9.76e-11!13;CL:0000622!4.74e-10!5;CL:0000244!1.17e-08!4;CL:0000731!1.17e-08!4;CL:0000154!2.95e-08!6;CL:0002077!3.20e-07!33;CL:0000150!4.16e-07!9;CL:0000076!6.55e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000244;5.12e-34;4!CL:0000731;5.12e-34;4!CL:0002159;2.73e-28;14!CL:0000240;1.55e-22;6!CL:0000311;1.55e-22;6!CL:0000079;1.55e-22;6!CL:0000237;1.55e-22;6!CL:0000575;2.41e-17;2!CL:0000622;6.52e-16;5!CL:0000312;1.49e-15;5!CL:0000362;3.31e-15;9!CL:0000154;2.35e-13;6!CL:0002076;1.41e-12;42!CL:0002231;2.93e-12;3!CL:0002623;3.88e-12;3!CL:0002077;2.99e-10;34!CL:0002336;6.31e-10;1!CL:0002261;6.31e-10;1!CL:0002170;6.31e-10;1!CL:0000150;4.49e-09;9!CL:0002251;6.94e-07;20 | |ontology_enrichment_celltype_v019=CL:0000244;5.12e-34;4!CL:0000731;5.12e-34;4!CL:0002159;2.73e-28;14!CL:0000240;1.55e-22;6!CL:0000311;1.55e-22;6!CL:0000079;1.55e-22;6!CL:0000237;1.55e-22;6!CL:0000575;2.41e-17;2!CL:0000622;6.52e-16;5!CL:0000312;1.49e-15;5!CL:0000362;3.31e-15;9!CL:0000154;2.35e-13;6!CL:0002076;1.41e-12;42!CL:0002231;2.93e-12;3!CL:0002623;3.88e-12;3!CL:0002077;2.99e-10;34!CL:0002336;6.31e-10;1!CL:0002261;6.31e-10;1!CL:0002170;6.31e-10;1!CL:0000150;4.49e-09;9!CL:0002251;6.94e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,4.93e-34,4;CL:0000731,4.93e-34,4;CL:0002159,3.89e-28,14;CL:0000240,1.32e-22,6;CL:0000311,1.32e-22,6;CL:0000079,1.32e-22,6;CL:0000237,1.32e-22,6;CL:0000036,1.32e-22,6;CL:0000357,1.32e-22,6;CL:0000114,1.32e-22,6;CL:0000575,5.54e-17,2;CL:0000622,6.70e-16,5;CL:0000312,1.22e-15,5;CL:0000362,2.86e-15,9;CL:0002076,8.07e-15,42;CL:0000154,2.41e-13,6;CL:0000066,1.82e-12,253;CL:0002231,2.03e-12,3;CL:0002623,3.99e-12,3;CL:0002077,3.59e-11,34;CL:0000223,2.26e-10,58;CL:0002336,6.88e-10,1;CL:0002261,6.88e-10,1;CL:0002170,6.88e-10,1;CL:0000150,4.56e-09,9;CL:0000076,2.12e-07,63;CL:0002251,7.17e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000357;1.55e-22;6!CL:0000114;1.55e-22;6 | |ontology_enrichment_development_v019=CL:0000357;1.55e-22;6!CL:0000114;1.55e-22;6 | ||
|ontology_enrichment_disease=DOID:305!2.16e-07!106;DOID:299!7.87e-07!25 | |ontology_enrichment_disease=DOID:305!2.16e-07!106;DOID:299!7.87e-07!25 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.72e-10!169;UBERON:0000925!5.72e-10!169;UBERON:0006595!5.72e-10!169;UBERON:0005910!6.93e-08!6;UBERON:0001004!1.80e-07!72;UBERON:0000064!4.56e-07!219;UBERON:0005631!4.81e-07!14;UBERON:0000158!4.81e-07!14;UBERON:0000365!7.31e-07!5;UBERON:0004121!9.98e-07!169 | |ontology_enrichment_uberon=UBERON:0004119!5.72e-10!169;UBERON:0000925!5.72e-10!169;UBERON:0006595!5.72e-10!169;UBERON:0005910!6.93e-08!6;UBERON:0001004!1.80e-07!72;UBERON:0000064!4.56e-07!219;UBERON:0005631!4.81e-07!14;UBERON:0000158!4.81e-07!14;UBERON:0000365!7.31e-07!5;UBERON:0004121!9.98e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.77e-27;5!UBERON:0005910;8.65e-23;6!UBERON:0000486;1.65e-11;12!UBERON:0001003;3.40e-09;15!UBERON:0007376;3.40e-09;15!UBERON:0000964;3.89e-09;4!UBERON:0010409;3.89e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0000365;2.77e-27;5!UBERON:0005910;8.65e-23;6!UBERON:0000486;1.65e-11;12!UBERON:0001003;3.40e-09;15!UBERON:0007376;3.40e-09;15!UBERON:0000964;3.89e-09;4!UBERON:0010409;3.89e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.68e-27,5;UBERON:0005910,8.43e-23,6;UBERON:0003102,6.01e-12,99;UBERON:0001003,3.12e-09,15;UBERON:0007376,3.12e-09,15;UBERON:0007383,3.12e-09,15;UBERON:0000964,5.87e-09,4;UBERON:0010409,5.87e-09,4;UBERON:0004348,5.87e-09,4;UBERON:0005427,5.87e-09,4;UBERON:0006554,4.05e-08,47;UBERON:0001008,6.21e-08,48;UBERON:0004119,9.15e-08,160;UBERON:0000925,9.15e-08,160;UBERON:0006595,9.15e-08,160 | |||
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|short_description=p@chr17:73747066..73747079,+ | |short_description=p@chr17:73747066..73747079,+ | ||
}} | }} |
Latest revision as of 21:12, 25 July 2015
Short description: | p@chr17:73747066..73747079, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73747066..73747079, + |
Coexpression cluster: | C436_Sebocyte_Prostate_Keratinocyte_Urothelial_Small_Mammary_salivary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 4.93e-34 | 4 |
urothelial cell | 4.93e-34 | 4 |
general ecto-epithelial cell | 3.89e-28 | 14 |
stratified squamous epithelial cell | 1.32e-22 | 6 |
keratin accumulating cell | 1.32e-22 | 6 |
stratified epithelial cell | 1.32e-22 | 6 |
keratinizing barrier epithelial cell | 1.32e-22 | 6 |
epithelial fate stem cell | 1.32e-22 | 6 |
stratified epithelial stem cell | 1.32e-22 | 6 |
surface ectodermal cell | 1.32e-22 | 6 |
corneal epithelial cell | 5.54e-17 | 2 |
acinar cell | 6.70e-16 | 5 |
keratinocyte | 1.22e-15 | 5 |
epidermal cell | 2.86e-15 | 9 |
endo-epithelial cell | 8.07e-15 | 42 |
protein secreting cell | 2.41e-13 | 6 |
epithelial cell | 1.82e-12 | 253 |
epithelial cell of prostate | 2.03e-12 | 3 |
acinar cell of salivary gland | 3.99e-12 | 3 |
ecto-epithelial cell | 3.59e-11 | 34 |
endodermal cell | 2.26e-10 | 58 |
buccal mucosa cell | 6.88e-10 | 1 |
endothelial cell of viscerocranial mucosa | 6.88e-10 | 1 |
keratinized cell of the oral mucosa | 6.88e-10 | 1 |
glandular epithelial cell | 4.56e-09 | 9 |
squamous epithelial cell | 2.12e-07 | 63 |
epithelial cell of alimentary canal | 7.17e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.68e-27 | 5 |
transitional epithelium | 8.43e-23 | 6 |
surface structure | 6.01e-12 | 99 |
skin epidermis | 3.12e-09 | 15 |
outer epithelium | 3.12e-09 | 15 |
enveloping layer of ectoderm | 3.12e-09 | 15 |
cornea | 5.87e-09 | 4 |
eye surface | 5.87e-09 | 4 |
optic eminence | 5.87e-09 | 4 |
corneal primordium | 5.87e-09 | 4 |
urinary system structure | 4.05e-08 | 47 |
renal system | 6.21e-08 | 48 |
endoderm-derived structure | 9.15e-08 | 160 |
endoderm | 9.15e-08 | 160 |
presumptive endoderm | 9.15e-08 | 160 |