FFCP PHASE1:Hg19::chr17:74136069..74136082,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC= | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=394bp_to_AB463648,AB464532_5end | |association_with_transcript=394bp_to_AB463648,AB464532_5end | ||
|cluster_id=chr17:74136069..74136082,- | |||
|coexpression_cluster_id=C2436 | |coexpression_cluster_id=C2436 | ||
|description=CAGE_peak_3_at_AB463648_5end,CAGE_peak_3_at_AB464532_5end | |description=CAGE_peak_3_at_AB463648_5end,CAGE_peak_3_at_AB464532_5end |
Latest revision as of 21:21, 25 July 2015
Short description: | p3@AB463648, p3@AB464532 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AB463648_5end, CAGE_peak_3_at_AB464532_5end |
Coexpression cluster: | C2436_serous_gastric_argyrophil_gall_smallcell_gastrointestinal_acantholytic |
Association with transcript: | 394bp_to_AB463648, AB464532_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@AB463648p3@AB464532 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 5.56e-16 | 1 |
peptide hormone secreting cell | 1.78e-15 | 1 |
enteroendocrine cell | 1.78e-15 | 1 |
type D enteroendocrine cell | 1.78e-15 | 1 |
somatostatin secreting cell | 1.78e-15 | 1 |
pancreatic D cell | 1.78e-15 | 1 |
progenitor cell of endocrine pancreas | 1.78e-15 | 1 |
seromucus secreting cell | 1.20e-08 | 2 |
epithelial cell of gall bladder | 1.39e-08 | 2 |
epithelial cell of cervix | 1.61e-08 | 2 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.53e-19 | 3 |
internal male genitalia | 1.53e-19 | 3 |
epithelium of female gonad | 5.56e-16 | 1 |
vas deferens | 2.06e-15 | 1 |
spermatic cord | 2.06e-15 | 1 |
epididymis | 3.66e-15 | 1 |
duct of male reproductive system | 6.49e-15 | 4 |
epithelium of gonad | 1.20e-08 | 2 |
uterine epithelium | 1.61e-08 | 2 |
cervix epithelium | 1.61e-08 | 2 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 5.56e-16 | 1 |
somatostatinoma | 1.78e-15 | 1 |
gastrointestinal system cancer | 6.83e-10 | 14 |
cell type cancer | 3.27e-07 | 143 |
Showing 1 to 4 of 4 entries