FFCP PHASE1:Hg19::chr17:76220151..76220166,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:76220151..76220166,+ | |||
|coexpression_cluster_id=C747 | |||
|description=CAGE_peak_at_chr17:76220151..76220166,+ | |description=CAGE_peak_at_chr17:76220151..76220166,+ | ||
|id=chr17:76220151..76220166,+ | |id=chr17:76220151..76220166,+ | ||
|ontology_enrichment_celltype=CL:0000548!5.14e-25!679;CL:0000004!5.14e-25!679;CL:0000255!5.14e-25!679;CL:0000012!1.21e-24!682;CL:0000066!1.90e-21!254;CL:0002321!1.08e-16!248;CL:0000220!2.87e-16!246;CL:0000003!8.05e-16!722;CL:0000055!3.28e-14!180;CL:0000144!2.98e-12!625;CL:0000063!3.94e-09!578;CL:0000222!2.83e-08!119;CL:0002371!5.56e-08!591;CL:0000333!1.11e-07!41;CL:0000076!1.18e-07!62;CL:0000133!2.41e-07!59;CL:0000213!3.80e-07!57;CL:0000215!3.80e-07!57 | |ontology_enrichment_celltype=CL:0000548!5.14e-25!679;CL:0000004!5.14e-25!679;CL:0000255!5.14e-25!679;CL:0000012!1.21e-24!682;CL:0000066!1.90e-21!254;CL:0002321!1.08e-16!248;CL:0000220!2.87e-16!246;CL:0000003!8.05e-16!722;CL:0000055!3.28e-14!180;CL:0000144!2.98e-12!625;CL:0000063!3.94e-09!578;CL:0000222!2.83e-08!119;CL:0002371!5.56e-08!591;CL:0000333!1.11e-07!41;CL:0000076!1.18e-07!62;CL:0000133!2.41e-07!59;CL:0000213!3.80e-07!57;CL:0000215!3.80e-07!57 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.10e-18,253;CL:0002321,2.12e-14,250;CL:0000222,1.00e-07,121;CL:0000333,1.38e-07,41;CL:0000076,2.28e-07,63;CL:0000213,3.46e-07,58;CL:0000215,3.46e-07,58;CL:0000133,6.17e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.06e-30!235;DOID:14566!4.83e-30!239;DOID:0050687!2.68e-16!143;DOID:0050686!4.02e-13!137;DOID:305!4.45e-13!106;DOID:2531!2.03e-10!51;DOID:0060083!2.03e-10!51;DOID:1240!1.58e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;4.59e-07;51!DOID:0060083;4.59e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.50e-29,235;DOID:14566,6.12e-29,239;DOID:0050687,5.34e-15,143;DOID:0050686,1.05e-12,137;DOID:305,4.12e-12,106;DOID:2531,6.01e-11,51;DOID:0060083,6.01e-11,51;DOID:1240,6.50e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.99e-07!9 | |ontology_enrichment_uberon=UBERON:0001737!3.99e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.17e-07;9!UBERON:0001557;2.17e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.16e-07,9 | |||
|phase1_expression=0,1.49870366723688,0.140954404095971,1.0007329835313,0,0,0,1.26343974685366,0,13.02389863458,15.3516256953934,13.1064823278103,1.84636884759917,6.06455129504228,2.65117900582333,2.01697543935533,0.602694528023977,1.46062018077475,1.46379839637152,20.8074588149772,13.4640456221207,12.2247341376454,21.7539350219603,21.2155358862971,15.1906593909711,6.49513948857586,6.89644951379544,6.69041641166274,0,0,0.154816123316076,11.0330546937471,10.843413076017,0.739508020333575,12.2398176916877,16.3494617360535,2.93600439334847,0.553995408531877,0,0,0,0.32389366601898,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0,0,0,7.63813845847723,0,0,0,1.00311897234407,0,0,0,5.34770193048833,0,0.221533894583621,0,2.81800903396485,1.56071217071854,3.61763390128087,5.52700035571697,4.34704628602579,0,0,0,10.5377688708737,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0.534880391567015,0,0,4.69490601792545,4.73091478821062,31.0837671050727,6.01605492763067,3.47631645505977,3.9764297352555,0,10.7769691567037,4.43458794925128,4.47957407034943,0.785874452986276,7.28590576585084,8.52804218404188,0.324547393654683,0,0.132957960518865,0,0,0,9.73935796096855,5.16140757063675,9.02565304179745,0.56530794192401,9.22898759661793,9.35401342596229,5.01587919688345,0,1.42306505074684,2.34304428935269,14.9046847330384,6.84244895146661,1.22031028774085,15.0741862941806,8.1014194788176,3.57198913136319,3.36794058939255,4.39184773884957,0,1.89853131913626,7.5112715011467,0,0,7.41359888642308,1.98788780678127,9.62391888650806,0.132409180813219,2.86836620748814,4.25602058638028,3.36406560085384,7.47242970107935,1.72667283892012,1.55605517699883,4.44545217829971,5.88462851208451,4.38936540170301,1.72852777344,12.1847144553574,3.1216007683032,6.84566185853339,5.97794722207204,7.63324241184472,12.9498355494505,13.3428266367136,1.63323337003915,27.3920527605243,0.413303124703062,1.18800285728205,1.48360157567134,5.46096817162816,8.62341770179486,17.6752919651769,10.384837149373,2.77064115484183,13.1693286264251,7.04921930337745,1.95309476578576,5.21788042536097,3.58779271377724,0.640672166455702,4.4505699243508,6.00182192168805,8.14114980983667,0.772921620136887,1.8611685633159,4.05063197379039,8.57445645418548,4.54380793639406,0.920498986422993,1.93975268182574,7.4552014428489,15.5158231270566,12.5474838309761,1.35282597214308,5.45492241181669,0.573609190778008,7.07447495551653,8.21684563593209,8.8307396580834,4.76840853070704,9.84051318414951,20.0737547491706,3.12899064659632,1.92972281457866,2.76269842704961,0.464367928031979,2.16563844500876,22.2416784074907,22.7589331605437,26.511213287183,22.7205583828732,23.7488594060723,23.9643325302208,27.5055868646735,23.7427972801669,19.6221050042659,5.90524363699719,5.60967095213783,6.173610169971,1.47008711385542,0,0.982827216677626,0.590789906681404,16.7755977777567,6.3953988042419,4.80389868835872,1.09750285408626,1.1240175325762,1.80952150340936,3.98130314181677,10.4258657699304,4.15973914111831,7.21656710126366,8.69478037313076,0.117408694235822,8.8063533134255,5.09284063834272,10.8444866773721,35.5591979081674,7.72637545885385,0.246217006087397,0,2.37809859661965,0.93733833986777,0.16798212819886,1.98485136139341,8.14982556595919,13.0785272331283,6.13412286664338,0.492663237895943,1.40877494421162,0,0,0,11.4296209725904,6.49380323449072,8.20522130470329,8.55362230113526,4.62723717164956,9.01029173531752,0.857479297891735,18.0531045796031,3.05172048183296,13.274229733592,0.129271715757778,0,11.834238535784,1.06375246633948,3.12022310734098,24.4347005549035,24.1143524439573,28.5071731547226,0.714889968290738,0,10.70212437815,11.4007664502807,1.06617584622764,20.5907486962692,0,0,0.99972991182057,0,0.502257091432126,4.21667878966063,0.718874566474748,0,8.5582143024431,4.34343920002738,6.1642896765115,5.19276793395697,12.7777064152621,0,0.431255149719035,0,3.30323011489202,2.60279707715243,0.773288812777695,3.35032530668698,2.55175500661265,0,0,0,0.736148950314839,4.50153468953709,4.06897535549603,0.623912584592421,4.81758269752337,1.10391690523754,1.7571212248907,0.601892199455438,0,2.0694614258501,11.2918351751024,8.84972009000175,5.73431855489347,1.17480694477644,1.71571711905428,0,0,0,4.54691357169389,16.6435439510497,10.8860505598685,0,0.306923946576125,0.280660094433074,0,1.02341449813341,0,1.48418066444991,16.5004372368841,2.66342587969691,13.1403449622095,2.07701771673448,12.5507208736756,5.31781578203138,1.00253235151642,0,11.5962592646253,9.650831904356,0.393373244878272,4.06079651616671,2.54150612444569,26.6678921520131,14.6139224653261,6.43864936246542,9.09867072567173,7.31402932689017,8.63663664408557,12.3381802152231,12.1925896894734,6.02027728625824,8.15604073744123,3.3243040357149,8.73111543416495,13.374852475402,31.1108186719632,23.080511260475,6.23227826829441,4.22991913063594,0.206082023295445,27.196131051048,44.060072957594,0.574265537996172,1.3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| ||
|short_description=p@chr17:76220151..76220166,+ | |short_description=p@chr17:76220151..76220166,+ | ||
}} | }} |
Latest revision as of 21:54, 25 July 2015
Short description: | p@chr17:76220151..76220166, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:76220151..76220166, + |
Coexpression cluster: | C747_Mesenchymal_alveolar_Trabecular_Alveolar_carcinoid_Renal_chronic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.10e-18 | 253 |
embryonic cell | 2.12e-14 | 250 |
mesodermal cell | 1.00e-07 | 121 |
migratory neural crest cell | 1.38e-07 | 41 |
squamous epithelial cell | 2.28e-07 | 63 |
lining cell | 3.46e-07 | 58 |
barrier cell | 3.46e-07 | 58 |
neurectodermal cell | 6.17e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.16e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.50e-29 | 235 |
disease of cellular proliferation | 6.12e-29 | 239 |
cell type cancer | 5.34e-15 | 143 |
organ system cancer | 1.05e-12 | 137 |
carcinoma | 4.12e-12 | 106 |
hematologic cancer | 6.01e-11 | 51 |
immune system cancer | 6.01e-11 | 51 |
leukemia | 6.50e-08 | 39 |