FFCP PHASE1:Hg19::chr17:76411049..76411071,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:76411049..76411071,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr17:76411049..76411071,+ | |description=CAGE_peak_at_chr17:76411049..76411071,+ | ||
|id=chr17:76411049..76411071,+ | |id=chr17:76411049..76411071,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.00e-22!42;CL:0000860!2.28e-20!45;CL:0000766!2.35e-14!76;CL:0002194!5.88e-12!63;CL:0000576!5.88e-12!63;CL:0000040!5.88e-12!63;CL:0000559!5.88e-12!63;CL:0002009!2.29e-11!65;CL:0000738!2.34e-10!140;CL:0000839!4.76e-10!70;CL:0000557!8.27e-10!71;CL:0002087!1.80e-09!119;CL:0000763!1.18e-07!112;CL:0000049!1.18e-07!112;CL:0002031!2.15e-07!124;CL:0000775!4.35e-07!3;CL:0000037!5.39e-07!172;CL:0000566!5.39e-07!172 | |ontology_enrichment_celltype=CL:0002057!2.00e-22!42;CL:0000860!2.28e-20!45;CL:0000766!2.35e-14!76;CL:0002194!5.88e-12!63;CL:0000576!5.88e-12!63;CL:0000040!5.88e-12!63;CL:0000559!5.88e-12!63;CL:0002009!2.29e-11!65;CL:0000738!2.34e-10!140;CL:0000839!4.76e-10!70;CL:0000557!8.27e-10!71;CL:0002087!1.80e-09!119;CL:0000763!1.18e-07!112;CL:0000049!1.18e-07!112;CL:0002031!2.15e-07!124;CL:0000775!4.35e-07!3;CL:0000037!5.39e-07!172;CL:0000566!5.39e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000094;9.83e-21;8!CL:0000775;1.19e-20;3!CL:0000860;2.39e-16;33!CL:0002057;2.39e-16;33!CL:0000081;5.04e-15;11!CL:0000771;2.08e-14;2!CL:0000473;1.11e-11;39!CL:0000234;1.11e-11;39!CL:0000576;2.34e-08;48!CL:0000766;1.52e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,9.85e-21,8;CL:0000775,1.19e-20,3;CL:0000766,1.17e-16,72;CL:0000081,5.05e-15,11;CL:0000771,2.08e-14,2;CL:0000860,3.17e-13,42;CL:0002057,3.17e-13,42;CL:0000473,2.35e-11,48;CL:0000234,2.35e-11,48;CL:0000763,3.74e-10,108;CL:0000049,3.74e-10,108;CL:0000738,6.10e-10,136;CL:0002194,9.64e-09,59;CL:0000576,9.64e-09,59;CL:0000040,9.64e-09,59;CL:0000559,9.64e-09,59;CL:0002009,2.09e-08,61;CL:0002032,7.02e-08,161;CL:0000837,7.02e-08,161;CL:0000839,1.19e-07,66;CL:0000557,1.63e-07,67;CL:0000037,2.05e-07,168;CL:0000988,7.18e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.30e-11;42!UBERON:0000358;1.15e-07;1!UBERON:0010115;2.10e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.78e-27!115;UBERON:0002390!6.59e-17!102;UBERON:0003061!6.59e-17!102;UBERON:0002193!2.62e-16!112;UBERON:0000178!5.57e-11!15;UBERON:0000179!5.57e-11!15;UBERON:0000463!5.57e-11!15;UBERON:0001049!1.07e-10!57;UBERON:0005068!1.07e-10!57;UBERON:0006241!1.07e-10!57;UBERON:0007135!1.07e-10!57;UBERON:0002298!6.91e-09!8;UBERON:0003076!1.84e-08!15;UBERON:0003057!1.84e-08!15;UBERON:0002405!2.98e-08!115;UBERON:0002371!6.08e-08!80;UBERON:0002308!1.16e-07!9;UBERON:0000125!1.16e-07!9;UBERON:0002616!2.45e-07!59;UBERON:0002020!3.95e-07!34;UBERON:0003528!3.95e-07!34;UBERON:0003075!4.89e-07!86;UBERON:0007284!4.89e-07!86;UBERON:0001474!6.16e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.76e-20;15!UBERON:0000179;9.76e-20;15!UBERON:0000463;9.76e-20;15!UBERON:0002390;4.09e-14;32!UBERON:0002193;1.29e-09;42!UBERON:0002106;4.72e-09;3!UBERON:0002363;2.10e-07;1!UBERON:0000029;2.10e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.35e-20,15;UBERON:0000179,8.35e-20,15;UBERON:0000463,8.35e-20,15;UBERON:0002390,6.26e-19,98;UBERON:0003061,6.26e-19,98;UBERON:0002193,7.06e-19,108;UBERON:0002106,4.18e-09,3;UBERON:0004854,4.18e-09,3;UBERON:0009034,4.18e-09,3;UBERON:0002095,4.18e-09,3;UBERON:0004782,4.18e-09,3;UBERON:0003281,4.18e-09,3;UBERON:0009664,4.18e-09,3;UBERON:0002296,4.18e-09,3;UBERON:0005602,4.18e-09,3;UBERON:0001179,4.18e-09,3;UBERON:0006293,4.18e-09,3;UBERON:0002405,1.08e-08,93;UBERON:0003081,3.31e-08,203;UBERON:0000029,1.48e-07,1;UBERON:0002363,1.69e-07,1;UBERON:0007645,1.69e-07,1;UBERON:0007647,1.69e-07,1;UBERON:0010115,1.69e-07,1 | |||
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| ||
|short_description=p@chr17:76411049..76411071,+ | |short_description=p@chr17:76411049..76411071,+ | ||
}} | }} |
Latest revision as of 22:01, 25 July 2015
Short description: | p@chr17:76411049..76411071, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:76411049..76411071, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 9.85e-21 | 8 |
neutrophil | 1.19e-20 | 3 |
myeloid leukocyte | 1.17e-16 | 72 |
blood cell | 5.05e-15 | 11 |
eosinophil | 2.08e-14 | 2 |
classical monocyte | 3.17e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.17e-13 | 42 |
defensive cell | 2.35e-11 | 48 |
phagocyte | 2.35e-11 | 48 |
myeloid cell | 3.74e-10 | 108 |
common myeloid progenitor | 3.74e-10 | 108 |
leukocyte | 6.10e-10 | 136 |
monopoietic cell | 9.64e-09 | 59 |
monocyte | 9.64e-09 | 59 |
monoblast | 9.64e-09 | 59 |
promonocyte | 9.64e-09 | 59 |
macrophage dendritic cell progenitor | 2.09e-08 | 61 |
hematopoietic oligopotent progenitor cell | 7.02e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.02e-08 | 161 |
myeloid lineage restricted progenitor cell | 1.19e-07 | 66 |
granulocyte monocyte progenitor cell | 1.63e-07 | 67 |
hematopoietic stem cell | 2.05e-07 | 168 |
hematopoietic cell | 7.18e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 8.35e-20 | 15 |
haemolymphatic fluid | 8.35e-20 | 15 |
organism substance | 8.35e-20 | 15 |
hematopoietic system | 6.26e-19 | 98 |
blood island | 6.26e-19 | 98 |
hemolymphoid system | 7.06e-19 | 108 |
spleen | 4.18e-09 | 3 |
gastrointestinal system mesentery | 4.18e-09 | 3 |
stomach region | 4.18e-09 | 3 |
mesentery | 4.18e-09 | 3 |
gastrointestinal system serosa | 4.18e-09 | 3 |
mesentery of stomach | 4.18e-09 | 3 |
gut mesentery | 4.18e-09 | 3 |
dorsal mesentery | 4.18e-09 | 3 |
dorsal mesogastrium | 4.18e-09 | 3 |
peritoneal cavity | 4.18e-09 | 3 |
spleen primordium | 4.18e-09 | 3 |
immune system | 1.08e-08 | 93 |
lateral plate mesoderm | 3.31e-08 | 203 |
lymph node | 1.48e-07 | 1 |
dura mater | 1.69e-07 | 1 |
future meninx | 1.69e-07 | 1 |
ectomeninx | 1.69e-07 | 1 |
future dura mater | 1.69e-07 | 1 |