FFCP PHASE1:Hg19::chr17:77743928..77743937,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:77743928..77743937,- | |||
|coexpression_cluster_id=C3695 | |||
|description=CAGE_peak_at_chr17:77743928..77743937,- | |description=CAGE_peak_at_chr17:77743928..77743937,- | ||
|id=chr17:77743928..77743937,- | |id=chr17:77743928..77743937,- | ||
|ontology_enrichment_celltype=CL:0002150!2.24e-30!3;CL:0000861!2.24e-30!3;CL:0000319!9.57e-12!1;CL:0000066!4.26e-10!254;CL:0000235!1.53e-09!10 | |ontology_enrichment_celltype=CL:0002150!2.24e-30!3;CL:0000861!2.24e-30!3;CL:0000319!9.57e-12!1;CL:0000066!4.26e-10!254;CL:0000235!1.53e-09!10 | ||
|ontology_enrichment_celltype_v019=CL:0000319;9.81e-20;1!CL:0000159;1.50e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.08e-19,1;CL:0000159,1.57e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.13e-22;29 | |||
|ontology_enrichment_disease=DOID:305!1.12e-21!106;DOID:0050687!1.28e-17!143;DOID:162!2.77e-14!235;DOID:14566!6.23e-14!239;DOID:3030!9.57e-12!1 | |||
|ontology_enrichment_disease_v019=DOID:3030;9.81e-20;1!DOID:4556;1.87e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.08e-19,1;DOID:305,1.86e-10,106;DOID:162,1.45e-08,235;DOID:14566,2.27e-08,239;DOID:0050687,1.31e-07,143;DOID:4556,1.82e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.21e-88!9;UBERON:0001557!3.44e-41!19;UBERON:0008947!8.26e-36!38;UBERON:0003258!8.26e-36!38;UBERON:0000072!2.75e-29!46;UBERON:0000065!3.43e-25!53;UBERON:0001004!4.45e-18!72;UBERON:0000063!5.95e-13!97;UBERON:0001041!8.42e-13!98;UBERON:0000077!3.40e-09!130;UBERON:0004921!3.40e-09!129;UBERON:0004185!3.40e-09!129;UBERON:0001007!2.37e-07!155;UBERON:0001555!2.37e-07!155;UBERON:0007026!2.37e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.14e-49;9!UBERON:0001557;1.14e-49;9!UBERON:0000072;2.28e-15;37!UBERON:0000065;1.90e-14;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.14e-49,9;UBERON:0001557,1.09e-23,19;UBERON:0008947,5.79e-17,38;UBERON:0003258,5.79e-17,38;UBERON:0000072,1.06e-13,47;UBERON:0000065,6.57e-12,54;UBERON:0001004,1.21e-08,74;UBERON:0001041,2.54e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41968160047813,1.18009283054671,0.964044119533928,1.10293972732394,1.74303555273925,0.474541238222193,1.07865046528132,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,1.19832309870889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35458863804719,0.803982487948041,0.656923656425674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4279750469085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86859742932552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,1.0362910251936,0,0,0,0,0,0,2.21195617878347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41968160047813,1.18009283054671,0.964044119533928,1.10293972732394,1.74303555273925,0.474541238222193,1.07865046528132,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,1.19832309870889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35458863804719,0.803982487948041,0.656923656425674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4279750469085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86859742932552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,1.0362910251936,0,0,0,0,0,0,2.21195617878347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:77743928..77743937,- | |short_description=p@chr17:77743928..77743937,- | ||
}} | }} |
Latest revision as of 22:24, 25 July 2015
Short description: | p@chr17:77743928..77743937, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:77743928..77743937, - |
Coexpression cluster: | C3695_large_glioblastoma_Hep2_mesothelioma_cervical_epitheloid_mucinous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.08e-19 | 1 |
seromucus secreting cell | 1.57e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.14e-49 | 9 |
upper respiratory tract | 1.09e-23 | 19 |
respiratory primordium | 5.79e-17 | 38 |
endoderm of foregut | 5.79e-17 | 38 |
segment of respiratory tract | 1.06e-13 | 47 |
respiratory tract | 6.57e-12 | 54 |
respiratory system | 1.21e-08 | 74 |
foregut | 2.54e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.08e-19 | 1 |
carcinoma | 1.86e-10 | 106 |
cancer | 1.45e-08 | 235 |
disease of cellular proliferation | 2.27e-08 | 239 |
cell type cancer | 1.31e-07 | 143 |
lung large cell carcinoma | 1.82e-07 | 3 |