FFCP PHASE1:Hg19::chr17:77809975..77809980,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:77809975..77809980,- | |||
|coexpression_cluster_id=C326 | |coexpression_cluster_id=C326 | ||
|description=CAGE_peak_at_chr17:77809975..77809980,- | |description=CAGE_peak_at_chr17:77809975..77809980,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.41e-09!5;CL:0000066!1.52e-09!254;CL:0000242!1.88e-07!2 | |ontology_enrichment_celltype=CL:0002322!1.41e-09!5;CL:0000066!1.52e-09!254;CL:0000242!1.88e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000167;6.93e-16;1!CL:0000164;6.93e-16;1!CL:0000502;6.93e-16;1!CL:0000172;6.93e-16;1!CL:0000173;6.93e-16;1 | |ontology_enrichment_celltype_v019=CL:0000167;6.93e-16;1!CL:0000164;6.93e-16;1!CL:0000502;6.93e-16;1!CL:0000172;6.93e-16;1!CL:0000173;6.93e-16;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,6.44e-16,1;CL:0000164,6.44e-16,1;CL:0000502,6.44e-16,1;CL:0000172,6.44e-16,1;CL:0000173,6.44e-16,1;CL:0002351,6.44e-16,1 | |||
|ontology_enrichment_development_v019=CL:0002351;6.93e-16;1!UBERON:0001041;6.65e-08;30 | |ontology_enrichment_development_v019=CL:0002351;6.93e-16;1!UBERON:0001041;6.65e-08;30 | ||
|ontology_enrichment_disease=DOID:305!4.26e-20!106;DOID:162!6.89e-19!235;DOID:14566!2.98e-18!239;DOID:0050687!1.06e-17!143;DOID:0050686!1.97e-09!137;DOID:5093!3.70e-08!4;DOID:1612!3.70e-08!4;DOID:3493!6.92e-08!2;DOID:1325!1.47e-07!7;DOID:3904!1.47e-07!7;DOID:3119!1.55e-07!14;DOID:299!6.60e-07!25 | |ontology_enrichment_disease=DOID:305!4.26e-20!106;DOID:162!6.89e-19!235;DOID:14566!2.98e-18!239;DOID:0050687!1.06e-17!143;DOID:0050686!1.97e-09!137;DOID:5093!3.70e-08!4;DOID:1612!3.70e-08!4;DOID:3493!6.92e-08!2;DOID:1325!1.47e-07!7;DOID:3904!1.47e-07!7;DOID:3119!1.55e-07!14;DOID:299!6.60e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.78e-29;2!DOID:1036;1.94e-16;8!DOID:4430;6.93e-16;1!DOID:5093;3.41e-15;4!DOID:1612;3.41e-15;4!DOID:299;2.05e-09;25!DOID:1325;4.21e-09;7!DOID:3904;4.21e-09;7!DOID:3910;2.31e-08;2!DOID:3905;2.86e-07;9 | |ontology_enrichment_disease_v019=DOID:3493;1.78e-29;2!DOID:1036;1.94e-16;8!DOID:4430;6.93e-16;1!DOID:5093;3.41e-15;4!DOID:1612;3.41e-15;4!DOID:299;2.05e-09;25!DOID:1325;4.21e-09;7!DOID:3904;4.21e-09;7!DOID:3910;2.31e-08;2!DOID:3905;2.86e-07;9 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,2.56e-29,2;DOID:1036,1.49e-16,8;DOID:4430,6.44e-16,1;DOID:5093,2.96e-15,4;DOID:1612,2.96e-15,4;DOID:162,1.82e-10,235;DOID:14566,3.21e-10,239;DOID:305,5.44e-10,106;DOID:299,2.07e-09,25;DOID:1325,4.39e-09,7;DOID:3904,4.39e-09,7;DOID:0050687,6.29e-09,143;DOID:3910,2.48e-08,2;DOID:3905,2.95e-07,9 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.31e-08;2!UBERON:0002173;2.31e-08;2!UBERON:0002186;2.31e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0004903;2.31e-08;2!UBERON:0002173;2.31e-08;2!UBERON:0002186;2.31e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.48e-08,2;UBERON:0002173,2.48e-08,2;UBERON:0002186,2.48e-08,2 | |||
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| ||
|short_description=p@chr17:77809975..77809980,- | |short_description=p@chr17:77809975..77809980,- | ||
}} | }} |
Latest revision as of 22:24, 25 July 2015
Short description: | p@chr17:77809975..77809980, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:77809975..77809980, - |
Coexpression cluster: | C326_bile_choriocarcinoma_giant_lung_mucinous_glassy_malignant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 6.44e-16 | 1 |
enteroendocrine cell | 6.44e-16 | 1 |
type D enteroendocrine cell | 6.44e-16 | 1 |
somatostatin secreting cell | 6.44e-16 | 1 |
pancreatic D cell | 6.44e-16 | 1 |
progenitor cell of endocrine pancreas | 6.44e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.48e-08 | 2 |
alveolar duct | 2.48e-08 | 2 |
bronchiole | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.56e-29 | 2 |
chronic leukemia | 1.49e-16 | 8 |
somatostatinoma | 6.44e-16 | 1 |
thoracic cancer | 2.96e-15 | 4 |
breast cancer | 2.96e-15 | 4 |
cancer | 1.82e-10 | 235 |
disease of cellular proliferation | 3.21e-10 | 239 |
carcinoma | 5.44e-10 | 106 |
adenocarcinoma | 2.07e-09 | 25 |
bronchus cancer | 4.39e-09 | 7 |
bronchogenic carcinoma | 4.39e-09 | 7 |
cell type cancer | 6.29e-09 | 143 |
lung adenocarcinoma | 2.48e-08 | 2 |
lung carcinoma | 2.95e-07 | 9 |