FFCP PHASE1:Hg19::chr17:79359195..79359212,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:79359195..79359212,- | |||
|coexpression_cluster_id=C327 | |coexpression_cluster_id=C327 | ||
|description=CAGE_peak_at_chr17:79359195..79359212,- | |description=CAGE_peak_at_chr17:79359195..79359212,- | ||
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|ontology_enrichment_celltype=CL:0000148!2.86e-22!10;CL:0000541!2.86e-22!10;CL:0000147!1.71e-15!14;CL:0002567!4.73e-12!3;CL:0000710!2.06e-10!20;CL:0000075!2.37e-07!27 | |ontology_enrichment_celltype=CL:0000148!2.86e-22!10;CL:0000541!2.86e-22!10;CL:0000147!1.71e-15!14;CL:0002567!4.73e-12!3;CL:0000710!2.06e-10!20;CL:0000075!2.37e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.16e-20;10!CL:0000147;1.83e-14;14!CL:0002567;4.40e-14;3!CL:0000710;8.19e-10;20!CL:0000075;5.28e-07;27 | |ontology_enrichment_celltype_v019=CL:0000148;1.16e-20;10!CL:0000147;1.83e-14;14!CL:0002567;4.40e-14;3!CL:0000710;8.19e-10;20!CL:0000075;5.28e-07;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.11e-20,10;CL:0000541,1.11e-20,10;CL:0000147,1.78e-14,14;CL:0002567,5.24e-14,3;CL:0000710,8.04e-10,20;CL:0000075,5.21e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.57e-17;82!UBERON:0006241;8.55e-13;3!UBERON:0003057;8.55e-13;3 | |ontology_enrichment_development_v019=UBERON:0006601;3.57e-17;82!UBERON:0006241;8.55e-13;3!UBERON:0003057;8.55e-13;3 | ||
|ontology_enrichment_disease=DOID:1909!1.72e-08!2 | |ontology_enrichment_disease=DOID:1909!1.72e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;8.02e-10;2 | |ontology_enrichment_disease_v019=DOID:1909;8.02e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,8.75e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.26e-81!57;UBERON:0005068!1.26e-81!57;UBERON:0006241!1.26e-81!57;UBERON:0007135!1.26e-81!57;UBERON:0002616!4.71e-66!59;UBERON:0000955!2.13e-61!69;UBERON:0006238!2.13e-61!69;UBERON:0001017!9.15e-60!82;UBERON:0005743!1.18e-59!86;UBERON:0002780!2.63e-58!41;UBERON:0001890!2.63e-58!41;UBERON:0006240!2.63e-58!41;UBERON:0003080!8.91e-57!42;UBERON:0000073!2.91e-56!94;UBERON:0001016!2.91e-56!94;UBERON:0001893!6.34e-56!34;UBERON:0002020!8.51e-56!34;UBERON:0003528!8.51e-56!34;UBERON:0003075!4.15e-54!86;UBERON:0007284!4.15e-54!86;UBERON:0002791!3.83e-53!33;UBERON:0002346!2.69e-51!90;UBERON:0001869!1.26e-49!32;UBERON:0007023!2.26e-48!115;UBERON:0003056!5.29e-40!61;UBERON:0000033!8.06e-35!123;UBERON:0002619!1.10e-34!22;UBERON:0000153!8.94e-33!129;UBERON:0007811!8.94e-33!129;UBERON:0004121!1.16e-30!169;UBERON:0000956!3.22e-30!25;UBERON:0000203!3.22e-30!25;UBERON:0002308!3.33e-30!9;UBERON:0000125!3.33e-30!9;UBERON:0000924!1.01e-29!173;UBERON:0006601!1.01e-29!173;UBERON:0001950!4.27e-29!20;UBERON:0003076!6.30e-25!15;UBERON:0003057!6.30e-25!15;UBERON:0002420!3.23e-24!9;UBERON:0007245!3.23e-24!9;UBERON:0010009!3.23e-24!9;UBERON:0010011!3.23e-24!9;UBERON:0000454!3.23e-24!9;UBERON:0009663!6.04e-24!7;UBERON:0002298!2.89e-20!8;UBERON:0004732!1.47e-19!13;UBERON:0000025!1.10e-18!194;UBERON:0004733!1.44e-16!12;UBERON:0002028!1.44e-16!12;UBERON:0007277!1.44e-16!12;UBERON:0000200!2.44e-14!6;UBERON:0000369!5.86e-14!4;UBERON:0002435!5.86e-14!4;UBERON:0000204!5.86e-14!4;UBERON:0010082!5.86e-14!4;UBERON:0004111!3.26e-13!241;UBERON:0000349!1.50e-11!5;UBERON:0002771!1.72e-11!3;UBERON:0006331!2.36e-11!3;UBERON:0000477!2.81e-11!286;UBERON:0001872!2.97e-11!5;UBERON:0001871!3.37e-11!7;UBERON:0002240!4.74e-11!3;UBERON:0005383!6.03e-11!3;UBERON:0005382!6.03e-11!3;UBERON:0000988!6.46e-11!3;UBERON:0001896!9.41e-11!3;UBERON:0005290!9.41e-11!3;UBERON:0010096!9.41e-11!3;UBERON:0000483!1.48e-10!309;UBERON:0000064!1.68e-10!219;UBERON:0000119!2.32e-10!312;UBERON:0000475!3.67e-10!365;UBERON:0002680!4.88e-09!9;UBERON:0001895!4.88e-09!9;UBERON:0010092!4.88e-09!9;UBERON:0005162!8.90e-09!2;UBERON:0000122!8.90e-09!2;UBERON:0001897!1.72e-08!2;UBERON:0001875!2.39e-08!2;UBERON:0006514!2.39e-08!2;UBERON:0002148!5.79e-08!2;UBERON:0009662!5.79e-08!2;UBERON:0001954!6.43e-08!2;UBERON:0003022!6.43e-08!2;UBERON:0002421!6.43e-08!2;UBERON:0002600!6.43e-08!2;UBERON:0001873!7.14e-08!2;UBERON:0010122!7.14e-08!2;UBERON:0005174!8.66e-07!5;UBERON:0001137!8.66e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!1.26e-81!57;UBERON:0005068!1.26e-81!57;UBERON:0006241!1.26e-81!57;UBERON:0007135!1.26e-81!57;UBERON:0002616!4.71e-66!59;UBERON:0000955!2.13e-61!69;UBERON:0006238!2.13e-61!69;UBERON:0001017!9.15e-60!82;UBERON:0005743!1.18e-59!86;UBERON:0002780!2.63e-58!41;UBERON:0001890!2.63e-58!41;UBERON:0006240!2.63e-58!41;UBERON:0003080!8.91e-57!42;UBERON:0000073!2.91e-56!94;UBERON:0001016!2.91e-56!94;UBERON:0001893!6.34e-56!34;UBERON:0002020!8.51e-56!34;UBERON:0003528!8.51e-56!34;UBERON:0003075!4.15e-54!86;UBERON:0007284!4.15e-54!86;UBERON:0002791!3.83e-53!33;UBERON:0002346!2.69e-51!90;UBERON:0001869!1.26e-49!32;UBERON:0007023!2.26e-48!115;UBERON:0003056!5.29e-40!61;UBERON:0000033!8.06e-35!123;UBERON:0002619!1.10e-34!22;UBERON:0000153!8.94e-33!129;UBERON:0007811!8.94e-33!129;UBERON:0004121!1.16e-30!169;UBERON:0000956!3.22e-30!25;UBERON:0000203!3.22e-30!25;UBERON:0002308!3.33e-30!9;UBERON:0000125!3.33e-30!9;UBERON:0000924!1.01e-29!173;UBERON:0006601!1.01e-29!173;UBERON:0001950!4.27e-29!20;UBERON:0003076!6.30e-25!15;UBERON:0003057!6.30e-25!15;UBERON:0002420!3.23e-24!9;UBERON:0007245!3.23e-24!9;UBERON:0010009!3.23e-24!9;UBERON:0010011!3.23e-24!9;UBERON:0000454!3.23e-24!9;UBERON:0009663!6.04e-24!7;UBERON:0002298!2.89e-20!8;UBERON:0004732!1.47e-19!13;UBERON:0000025!1.10e-18!194;UBERON:0004733!1.44e-16!12;UBERON:0002028!1.44e-16!12;UBERON:0007277!1.44e-16!12;UBERON:0000200!2.44e-14!6;UBERON:0000369!5.86e-14!4;UBERON:0002435!5.86e-14!4;UBERON:0000204!5.86e-14!4;UBERON:0010082!5.86e-14!4;UBERON:0004111!3.26e-13!241;UBERON:0000349!1.50e-11!5;UBERON:0002771!1.72e-11!3;UBERON:0006331!2.36e-11!3;UBERON:0000477!2.81e-11!286;UBERON:0001872!2.97e-11!5;UBERON:0001871!3.37e-11!7;UBERON:0002240!4.74e-11!3;UBERON:0005383!6.03e-11!3;UBERON:0005382!6.03e-11!3;UBERON:0000988!6.46e-11!3;UBERON:0001896!9.41e-11!3;UBERON:0005290!9.41e-11!3;UBERON:0010096!9.41e-11!3;UBERON:0000483!1.48e-10!309;UBERON:0000064!1.68e-10!219;UBERON:0000119!2.32e-10!312;UBERON:0000475!3.67e-10!365;UBERON:0002680!4.88e-09!9;UBERON:0001895!4.88e-09!9;UBERON:0010092!4.88e-09!9;UBERON:0005162!8.90e-09!2;UBERON:0000122!8.90e-09!2;UBERON:0001897!1.72e-08!2;UBERON:0001875!2.39e-08!2;UBERON:0006514!2.39e-08!2;UBERON:0002148!5.79e-08!2;UBERON:0009662!5.79e-08!2;UBERON:0001954!6.43e-08!2;UBERON:0003022!6.43e-08!2;UBERON:0002421!6.43e-08!2;UBERON:0002600!6.43e-08!2;UBERON:0001873!7.14e-08!2;UBERON:0010122!7.14e-08!2;UBERON:0005174!8.66e-07!5;UBERON:0001137!8.66e-07!5 | ||
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|short_description=p@chr17:79359195..79359212,- | |short_description=p@chr17:79359195..79359212,- | ||
}} | }} |
Latest revision as of 22:40, 25 July 2015
Short description: | p@chr17:79359195..79359212, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79359195..79359212, - |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.11e-20 | 10 |
melanoblast | 1.11e-20 | 10 |
pigment cell | 1.78e-14 | 14 |
light melanocyte | 5.24e-14 | 3 |
neurecto-epithelial cell | 8.04e-10 | 20 |
columnar/cuboidal epithelial cell | 5.21e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
melanoma | 8.75e-10 | 2 |