FFCP PHASE1:Hg19::chr18:21481209..21481225,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:21481209..21481225,+
|short_description=p@chr18:21481209..21481225,+
|description=CAGE_peak_at_chr18:21481209..21481225,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:21481209..21481225,+ | |||
|coexpression_cluster_id=C363 | |||
|description=CAGE_peak_at_chr18:21481209..21481225,+ | |||
|id=chr18:21481209..21481225,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.31e-25!43;CL:0000066!6.55e-23!254;CL:0000223!3.00e-18!59;CL:0002159!3.61e-11!13;CL:0002368!7.14e-11!13;CL:0002149!1.47e-09!6;CL:0002255!1.47e-09!6;CL:0002621!2.50e-08!3;CL:0002541!4.63e-08!3;CL:0000068!8.29e-08!3;CL:0000069!8.29e-08!3;CL:0000307!8.29e-08!3;CL:0000377!8.29e-08!3;CL:0002251!1.87e-07!21;CL:0000240!5.27e-07!6;CL:0000311!5.27e-07!6;CL:0000079!5.27e-07!6;CL:0000237!5.27e-07!6;CL:0000036!5.27e-07!6;CL:0000357!5.27e-07!6;CL:0000114!5.27e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000240;4.26e-19;6!CL:0000311;4.26e-19;6!CL:0000079;4.26e-19;6!CL:0000237;4.26e-19;6!CL:0002159;2.70e-18;14!CL:0002327;6.55e-17;4!CL:0002076;6.27e-15;42!CL:0000312;2.08e-13;5!CL:0000362;5.15e-13;9!CL:0002166;5.18e-11;3!CL:0002541;1.16e-10;3!CL:0002621;1.16e-10;3!CL:0002231;1.22e-10;3!CL:0000349;2.51e-09;19!CL:0002368;5.27e-09;13!CL:0002077;1.43e-08;34!CL:0002336;2.64e-08;1!CL:0002261;2.64e-08;1!CL:0002170;2.64e-08;1!CL:0002537;9.98e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000240,3.79e-19,6;CL:0000311,3.79e-19,6;CL:0000079,3.79e-19,6;CL:0000237,3.79e-19,6;CL:0000036,3.79e-19,6;CL:0000357,3.79e-19,6;CL:0000114,3.79e-19,6;CL:0002076,1.82e-18,42;CL:0002159,2.92e-18,14;CL:0002327,6.21e-17,4;CL:0000312,2.31e-13,5;CL:0000362,5.66e-13,9;CL:0000223,7.54e-13,58;CL:0000066,5.16e-12,253;CL:0002166,5.06e-11,3;CL:0002541,9.56e-11,3;CL:0002621,1.11e-10,3;CL:0002231,1.22e-10,3;CL:0002077,1.22e-09,34;CL:0000349,2.03e-09,19;CL:0002368,6.18e-09,13;CL:0002336,1.84e-08,1;CL:0002261,1.84e-08,1;CL:0002170,1.84e-08,1;CL:0002537,9.43e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;4.26e-19;6!CL:0000114;4.26e-19;6!CL:0000223;1.13e-07;58 | |||
|ontology_enrichment_disease=DOID:299!6.27e-10!25;DOID:3001!1.47e-09!6;DOID:305!2.53e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.03e-15!14;UBERON:0000158!3.03e-15!14;UBERON:0000305!1.17e-08!7;UBERON:0001949!2.50e-08!3;UBERON:0003124!3.24e-08!7;UBERON:0004923!3.63e-08!57;UBERON:0004119!4.14e-08!169;UBERON:0000925!4.14e-08!169;UBERON:0006595!4.14e-08!169;UBERON:0000476!4.63e-08!3;UBERON:0000920!4.63e-08!3;UBERON:0000478!6.04e-08!24;UBERON:0003100!1.63e-07!41;UBERON:0004871!1.64e-07!8;UBERON:0000161!7.42e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;7.13e-18;10!UBERON:0000158;7.13e-18;10!UBERON:0001911;6.55e-17;4!UBERON:0003124;1.16e-10;3!UBERON:0001949;1.16e-10;3!UBERON:0000920;1.16e-10;3!UBERON:0000305;8.72e-10;7!UBERON:0001708;1.81e-08;4!UBERON:0008895;1.81e-08;4!UBERON:0001003;7.30e-08;15!UBERON:0007376;7.30e-08;15!UBERON:0010371;1.06e-07;31!UBERON:0000478;2.45e-07;24!UBERON:0011159;6.20e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,6.21e-17,4;UBERON:0005333,6.21e-17,4;UBERON:0008425,6.21e-17,4;UBERON:0005311,6.21e-17,4;UBERON:0005631,7.45e-13,14;UBERON:0000158,7.45e-13,14;UBERON:0000920,9.56e-11,3;UBERON:0001949,1.11e-10,3;UBERON:0000305,6.85e-10,7;UBERON:0000076,1.00e-08,8;UBERON:0004871,1.03e-08,8;UBERON:0001708,1.78e-08,4;UBERON:0008895,1.78e-08,4;UBERON:0003102,2.72e-08,99;UBERON:0001003,7.72e-08,15;UBERON:0007376,7.72e-08,15;UBERON:0007383,7.72e-08,15;UBERON:0000478,2.07e-07,24;UBERON:0011159,6.12e-07,5 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,1.96597234917155,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,2.31913023795956,2.18196896472668,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07300799144152,1.1240175325762,1.50793458617446,1.94435734832912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9188383329259,3.54437743105966,2.4180801129769,4.65014301622339,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,5.01266175758212,1.28913384510255,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,3.25030123018261,0,0,0,0,0,0,0,0,0,3.8015530533025,2.11409074101617,0.893288987462089,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.384888450902048,0.670302275535787,1.08890984861323,0,0,0,0,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,2.62618933211459,0.296964680832639,2.15012491469462,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,1.91400695839152,0.274792780205587,9.59462596833542,0,0,0,0,0,0,0,0,0.421996129056054,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,1.04135843001079,0.293977192243133,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0.114536596165916,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.559518030877778,1.86623178009892,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550285795565037,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.266107110487916,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0.9555033757741,0,0,0,0,0,1.03608082081518,0.3414369541879,0,0.430227358820278,0,0,0.423387050190929,0.4582137370881,0.31020638566432,0.955538938977433,0.223710863595585,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,1.76447435857846,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,1.96597234917155,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,2.31913023795956,2.18196896472668,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07300799144152,1.1240175325762,1.50793458617446,1.94435734832912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9188383329259,3.54437743105966,2.4180801129769,4.65014301622339,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,5.01266175758212,1.28913384510255,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,3.25030123018261,0,0,0,0,0,0,0,0,0,3.8015530533025,2.11409074101617,0.893288987462089,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.384888450902048,0.670302275535787,1.08890984861323,0,0,0,0,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,2.62618933211459,0.296964680832639,2.15012491469462,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,1.91400695839152,0.274792780205587,9.59462596833542,0,0,0,0,0,0,0,0,0.421996129056054,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,1.04135843001079,0.293977192243133,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0.114536596165916,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.559518030877778,1.86623178009892,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550285795565037,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.266107110487916,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0.9555033757741,0,0,0,0,0,1.03608082081518,0.3414369541879,0,0.430227358820278,0,0,0.423387050190929,0.4582137370881,0.31020638566432,0.955538938977433,0.223710863595585,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,1.76447435857846,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:21481209..21481225,+ | |||
}} | }} |
Latest revision as of 00:00, 26 July 2015
Short description: | p@chr18:21481209..21481225, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:21481209..21481225, + |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelial cell | 3.79e-19 | 6 |
keratin accumulating cell | 3.79e-19 | 6 |
stratified epithelial cell | 3.79e-19 | 6 |
keratinizing barrier epithelial cell | 3.79e-19 | 6 |
epithelial fate stem cell | 3.79e-19 | 6 |
stratified epithelial stem cell | 3.79e-19 | 6 |
surface ectodermal cell | 3.79e-19 | 6 |
endo-epithelial cell | 1.82e-18 | 42 |
general ecto-epithelial cell | 2.92e-18 | 14 |
mammary gland epithelial cell | 6.21e-17 | 4 |
keratinocyte | 2.31e-13 | 5 |
epidermal cell | 5.66e-13 | 9 |
endodermal cell | 7.54e-13 | 58 |
epithelial cell | 5.16e-12 | 253 |
epithelial cell of Malassez | 5.06e-11 | 3 |
chorionic membrane mesenchymal stem cell | 9.56e-11 | 3 |
gingival epithelial cell | 1.11e-10 | 3 |
epithelial cell of prostate | 1.22e-10 | 3 |
ecto-epithelial cell | 1.22e-09 | 34 |
extraembryonic cell | 2.03e-09 | 19 |
respiratory epithelial cell | 6.18e-09 | 13 |
buccal mucosa cell | 1.84e-08 | 1 |
endothelial cell of viscerocranial mucosa | 1.84e-08 | 1 |
keratinized cell of the oral mucosa | 1.84e-08 | 1 |
amnion mesenchymal stem cell | 9.43e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 6.21e-17 | 4 |
mammary bud | 6.21e-17 | 4 |
mammary ridge | 6.21e-17 | 4 |
mammary placode | 6.21e-17 | 4 |
extraembryonic membrane | 7.45e-13 | 14 |
membranous layer | 7.45e-13 | 14 |
egg chorion | 9.56e-11 | 3 |
gingival epithelium | 1.11e-10 | 3 |
amnion | 6.85e-10 | 7 |
external ectoderm | 1.00e-08 | 8 |
somatic layer of lateral plate mesoderm | 1.03e-08 | 8 |
jaw skeleton | 1.78e-08 | 4 |
splanchnocranium | 1.78e-08 | 4 |
surface structure | 2.72e-08 | 99 |
skin epidermis | 7.72e-08 | 15 |
outer epithelium | 7.72e-08 | 15 |
enveloping layer of ectoderm | 7.72e-08 | 15 |
extraembryonic structure | 2.07e-07 | 24 |
primary subdivision of cranial skeletal system | 6.12e-07 | 5 |